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/docs/GAMBL/ADAMTS1.html
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--- a +++ b/docs/GAMBL/ADAMTS1.html @@ -0,0 +1,84 @@ +<!DOCTYPE html> +<html> +<head> + <meta charset="utf-8"> +</head> +<body> + +<script src="https://proteinpaint.stjude.org/bin/proteinpaint.js" charset="utf-8"></script> + +<div id=aaa style="margin:10px"></div> + +<script> +runproteinpaint({ + host:'https://proteinpaint.stjude.org', + holder:document.getElementById('aaa'), + gene: 'ADAMTS1', + genome:'hg19', + block:1, + positionbygene:'ADAMTS1', + tracks:[ + { + type:"bigwig", + url:"https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/DLBCL_genome.10.bw", + name:"DLBCL mutation density", + height:50, + pcolor: "#479450" + }, + { + type:"bigwig", + url:"https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/BL_genome.10.bw", + name:"BL mutation density", + height:50, + pcolor: "#926CAD" + }, + { + type:"bigwig", + url:"https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/FL_genome.10.bw", + name:"FL mutation density", + height:50, + pcolor: "#EA8368" + }, + { + type:"bigwig", + url:"https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/MCL_genome.10.bw", + name:"MCL mutation density", + height:50, + pcolor: "#40E0D0" + }, + { + type:'mds3', + name:'GAMBL DLBCL', + bcf: { + url: 'https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/DLBCL_genomes.22-04-24.vcf.gz' + } + }, + { + type:'mds3', + name:'GAMBL FLs', + bcf: { + url: 'https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/grch37/20-05-24/FL_genomes.vcf.gz' + } + }, + { + type:'mds3', + name:'GAMBL BLs', + bcf: { + url: 'https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/grch37/20-05-24/BL_genomes.vcf.gz' + } + }, + { + type:'mds3', + name:'GAMBL MCLs', + bcf: { + url: 'https://github.com/morinlab/LLMPP/raw/main/hubs/proteinpaint/data/grch37/20-05-24/MCL_genomes.vcf.gz' + } + } + ], + nativetracks: 'RefGene', + noheader:true, + nobox:true +}) +</script> +</body> +</html>