% Generated by roxygen2 (4.1.1): do not edit by hand

% Please edit documentation in R/readDACData.R

\name{readDACData}

\alias{readDACData}

\title{Read DLBCL class files}

\usage{

readDACData(geo_nbr)

}

\arguments{

\item{geo_nbr}{A \code{character} string giving the GSE number.}

}

\value{

A \code{data.frame} of the predicted classes and the class

  probabilities. Returns \code{NULL} if \code{geo_nbr} is not found.

}

\description{

Functions to read the internal data files of classified CEL files using

the DLBCL Automatic Classifier (DAC) [1]. These were manually supplied to the

DAC Windows interface.

}

\note{

The GSE11318 dataset was not classified using the DAC.

}

\examples{

head(DLBCL_overview[, -c(3,4,6)])

head(readDACData("GSE19246"))

readDACData("UNSUPPORTED_STUDY")

}

\author{

Anders Ellern Bilgrau \cr

  Steffen Falgreen

}

\references{

[1] Care, M. A., Barrans, S., Worrillow, L., Jack, A., Westhead, D. R., &

      Tooze, R. M. (2013). A microarray platform-independent classification

      tool for cell of origin class allows comparative analysis of gene

      expression in diffuse large B-cell lymphoma.

      PloS One, 8(2), e55895. doi:10.1371/journal.pone.0055895

}