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+++ b/man/downloadAndProcessDLBCL.Rd
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+% Generated by roxygen2 (4.1.1): do not edit by hand
+% Please edit documentation in R/downloadAndProcessDLBCL.R
+\name{downloadAndProcessDLBCL}
+\alias{downloadAndProcessDLBCL}
+\title{Download and process all curated DLBCL datasets}
+\usage{
+downloadAndProcessDLBCL(...)
+}
+\arguments{
+\item{\dots}{Arguments passed to \code{\link{downloadAndProcessGEO}}.}
+}
+\value{
+Saves a \code{list} of the processed datasets in the working
+  directory named "dlbcl_data.Rds".
+  Invisibly returns a \code{list} of the output of
+  \code{\link{downloadAndProcessGEO}}.
+}
+\description{
+Automatically download and process all support curated DLBCL datasets.
+Simply loops over all datasets in \code{data(dlbcl_overview)}.
+}
+\examples{
+listTargets("brainarray")
+\dontrun{
+# Warning, very long processing times if data is not downloaded.
+
+# Preprocess with brainarray "Entrez" gene ids
+res <- downloadAndProcessDLBCL(cdf = "brainarray", target = "ENTREZG",
+                               clean = FALSE)
+
+# Preprocess with brainarray "Ensembl" gene ids
+res2 <- downloadAndProcessDLBCL(cdf = "brainarray", target = "ENSG",
+                                clean = TRUE)
+
+# Preprocess with affy's probesets
+res3 <- downloadAndProcessDLBCL()  #= downloadAndProcessDLBCL(cdf = "affy")
+}
+}
+\author{
+Anders Ellern Bilgrau\cr
+  Steffen Falgreen Larsen
+}
+