--- a
+++ b/man/downloadAndPrepareMetadata.Rd
@@ -0,0 +1,44 @@
+% Generated by roxygen2 (4.1.1): do not edit by hand
+% Please edit documentation in R/downloadAndPrepareMetadata.R
+\name{downloadAndPrepareMetadata}
+\alias{downloadAndPrepareMetadata}
+\title{Download GEO metadata}
+\usage{
+downloadAndPrepareMetadata(geo_nbr, destdir = getwd(), clean = FALSE,
+  verbose = TRUE)
+}
+\arguments{
+\item{geo_nbr}{The GEO ascession number.}
+
+\item{destdir}{The destination dir of the downloaded files.}
+
+\item{clean}{Should the strictly unnessesary files be deleted?}
+
+\item{verbose}{Signal the process.}
+}
+\value{
+A \code{list} of \code{data.frame}s giving the clinical and metadata
+  information for the GEO dataset.
+}
+\description{
+Function for downloading the metadata of a GEO dataset and prepare it for
+analysis.
+The function uses \code{getGEOSuppFiles} which downloads the data. The
+function then unzips the data files in the GEO series.
+}
+\note{
+The function will overwrite existing files in the \code{destdir}.
+}
+\examples{
+\dontrun{
+print(DLBCL_overview)
+geo_nbr <- DLBCL_overview[6,1]
+downloadAndPrepareMetadata(geo_nbr = geo_nbr, destdir = getwd())
+}
+}
+\author{
+Anders Ellern Bilgrau,
+  Steffen Falgreen Larsen
+}
+\keyword{internal}
+