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a b/inst/extdata/predictions-GSE22470.txt
1
Sample  PredictedClass  Conf_TypeIII    Conf_ABC    Conf_GCB
2
GSM558119_MPI.261.CEL   GCB 0.116   0   0.884
3
GSM558120_MPI.262.CEL   GCB 0.102   0.017   0.881
4
GSM558121_MPI.269.CEL   ABC 0.106   0.882   0.012
5
GSM558122_MPI.270.CEL   ABC 0.139   0.854   0.007
6
GSM558123_MPI.272.CEL   GCB 0.384   0.096   0.52
7
GSM558124_MPI.273.CEL   ABC 0.074   0.744   0.182
8
GSM558125_MPI.274.CEL   ABC 0.134   0.842   0.024
9
GSM558126_MPI.276.CEL   GCB 0.012   0.333   0.655
10
GSM558127_MPI.277.CEL   TypeIII 0.52    0.468   0.011
11
GSM558128_MPI.278.CEL   ABC 0.151   0.837   0.012
12
GSM558129_MPI.279.CEL   TypeIII 0.842   0.141   0.017
13
GSM558130_MPI.281.CEL   ABC 0.176   0.761   0.063
14
GSM558131_MPI.282.CEL   GCB 0.028   0.467   0.505
15
GSM558132_MPI.285.CEL   GCB 0.129   0.003   0.868
16
GSM558133_MPI.286.CEL   ABC 0.139   0.601   0.26
17
GSM558134_MPI.288.CEL   ABC 0.14    0.853   0.007
18
GSM558135_MPI.289.CEL   ABC 0.164   0.816   0.02
19
GSM558136_MPI.290.CEL   GCB 0.1 0.443   0.457
20
GSM558137_MPI.291.CEL   ABC 0.03    0.749   0.221
21
GSM558138_MPI.292.CEL   GCB 0.012   0.133   0.855
22
GSM558139_MPI.293.CEL   ABC 0.044   0.808   0.148
23
GSM558140_MPI.294.CEL   TypeIII 0.586   0.099   0.315
24
GSM558141_MPI.295.CEL   GCB 0.131   0.011   0.858
25
GSM558142_MPI.299.CEL   ABC 0.203   0.737   0.06
26
GSM558143_MPI.302.CEL   GCB 0.144   0   0.856
27
GSM558144_MPI.304.CEL   ABC 0.448   0.456   0.096
28
GSM558145_MPI.306.CEL   ABC 0.121   0.831   0.048
29
GSM558146_MPI.308.CEL   GCB 0.008   0.113   0.88
30
GSM558147_MPI.309.CEL   GCB 0.055   0.199   0.746
31
GSM558148_MPI.310.CEL   GCB 0.005   0.093   0.902
32
GSM558149_MPI.311.CEL   GCB 0.132   0.234   0.634
33
GSM558150_MPI.312.CEL   GCB 0.091   0.028   0.881
34
GSM558151_MPI.314.CEL   GCB 0.086   0.012   0.902
35
GSM558152_MPI.315.CEL   GCB 0.009   0.129   0.862
36
GSM558153_MPI.316.CEL   GCB 0.058   0.201   0.741
37
GSM558154_MPI.317.CEL   GCB 0.068   0.181   0.75
38
GSM558155_MPI.318.CEL   GCB 0.424   0.007   0.57
39
GSM558156_MPI.319.CEL   ABC 0.003   0.614   0.384
40
GSM558157_MPI.320.CEL   GCB 0.443   0.019   0.538
41
GSM558158_MPI.321.CEL   ABC 0.039   0.645   0.316
42
GSM558159_MPI.324.CEL   GCB 0.26    0.046   0.694
43
GSM558160_MPI.325.CEL   GCB 0   0.106   0.894
44
GSM558161_MPI.326.CEL   GCB 0.077   0.104   0.819
45
GSM558162_MPI.327.CEL   ABC 0.09    0.895   0.015
46
GSM558163_MPI.329.CEL   GCB 0.031   0.131   0.838
47
GSM558164_MPI.330.CEL   GCB 0.362   0.002   0.635
48
GSM558165_MPI.331.CEL   ABC 0.093   0.901   0.006
49
GSM558166_MPI.332.CEL   GCB 0.094   0.008   0.898
50
GSM558167_MPI.334.CEL   ABC 0.09    0.904   0.006
51
GSM558168_MPI.335.CEL   GCB 0.169   0   0.831
52
GSM558169_MPI.336.CEL   ABC 0.158   0.705   0.137
53
GSM558170_MPI.337.CEL   ABC 0.09    0.872   0.038
54
GSM558171_MPI.338.CEL   GCB 0.046   0.153   0.802
55
GSM558172_MPI.339.CEL   GCB 0.12    0.004   0.876
56
GSM558173_MPI.340.CEL   ABC 0.05    0.757   0.193
57
GSM558174_MPI.341.CEL   GCB 0.128   0.003   0.869
58
GSM558175_MPI.342.CEL   ABC 0.429   0.53    0.041
59
GSM558176_MPI.343.CEL   TypeIII 0.57    0.415   0.015
60
GSM558177_MPI.344.CEL   GCB 0.243   0.121   0.636
61
GSM558178_MPI.345.CEL   TypeIII 0.382   0.283   0.335
62
GSM558179_MPI.346.CEL   ABC 0.42    0.548   0.032
63
GSM558180_MPI.347.CEL   ABC 0.104   0.884   0.012
64
GSM558181_MPI.348.CEL   ABC 0.128   0.854   0.018
65
GSM558182_MPI.349.CEL   ABC 0.183   0.736   0.081
66
GSM558183_MPI.350.CEL   ABC 0.202   0.439   0.359
67
GSM558184_MPI.351.CEL   GCB 0.213   0.05    0.737
68
GSM558185_MPI.352.CEL   ABC 0.123   0.858   0.019
69
GSM558186_MPI.353.CEL   GCB 0.152   0.027   0.821
70
GSM558187_MPI.355.CEL   GCB 0.15    0.02    0.83
71
GSM558188_MPI.356.CEL   GCB 0.086   0.003   0.911
72
GSM558189_MPI.357.CEL   ABC 0.196   0.547   0.258
73
GSM558190_MPI.358.CEL   GCB 0.091   0.2 0.709
74
GSM558191_MPI.359.CEL   ABC 0.138   0.856   0.007
75
GSM558192_MPI.360.CEL   GCB 0.479   0.037   0.484
76
GSM558193_MPI.362.CEL   GCB 0.089   0.006   0.905
77
GSM558194_MPI.363.CEL   ABC 0.327   0.565   0.108
78
GSM558195_MPI.364.CEL   GCB 0.426   0.036   0.537
79
GSM558196_MPI.365.CEL   TypeIII 0.7 0.219   0.081
80
GSM558197_MPI.366.CEL   ABC 0.106   0.861   0.033
81
GSM558198_MPI.367.CEL   GCB 0.208   0.251   0.541
82
GSM558199_MPI.368.CEL   GCB 0.093   0.016   0.891
83
GSM558200_MPI.369.CEL   ABC 0.038   0.695   0.267
84
GSM558201_MPI.370.CEL   TypeIII 0.546   0.086   0.368
85
GSM558202_MPI.371.CEL   GCB 0.408   0.02    0.572
86
GSM558203_MPI.372.CEL   TypeIII 0.434   0.302   0.264
87
GSM558204_MPI.373.CEL   TypeIII 0.64    0.301   0.059
88
GSM558205_MPI.374.CEL   ABC 0.127   0.836   0.037
89
GSM558206_MPI.377.CEL   ABC 0.139   0.82    0.041
90
GSM558207_MPI.378.CEL   ABC 0.231   0.387   0.382
91
GSM558208_MPI.379.CEL   GCB 0.098   0.019   0.883
92
GSM558209_MPI.381.CEL   GCB 0.086   0.006   0.908
93
GSM558210_MPI.383.CEL   GCB 0.035   0.14    0.826
94
GSM558211_MPI.384.CEL   ABC 0.094   0.645   0.261
95
GSM558212_MPI.385.CEL   GCB 0.109   0.018   0.873
96
GSM558213_MPI.386.CEL   GCB 0.105   0.02    0.875
97
GSM558214_MPI.389.CEL   ABC 0.285   0.674   0.041
98
GSM558215_MPI.390.CEL   ABC 0.266   0.581   0.153
99
GSM558216_MPI.391.CEL   TypeIII 0.726   0.039   0.236
100
GSM558217_MPI.393.CEL   GCB 0.095   0.022   0.883
101
GSM558218_MPI.394.CEL   TypeIII 0.793   0.041   0.165
102
GSM558219_MPI.395.CEL   ABC 0.112   0.876   0.012
103
GSM558220_MPI.397.CEL   ABC 0.049   0.563   0.387
104
GSM558221_MPI.398.CEL   GCB 0.24    0.202   0.558
105
GSM558222_MPI.399.CEL   GCB 0.086   0.016   0.898
106
GSM558223_MPI.400.CEL   GCB 0.091   0.004   0.906
107
GSM558224_MPI.401.CEL   ABC 0.125   0.796   0.079
108
GSM558225_MPI.402.CEL   GCB 0.334   0.262   0.404
109
GSM558226_MPI.403.CEL   GCB 0.247   0.286   0.467
110
GSM558227_MPI.404.CEL   GCB 0.099   0.005   0.896
111
GSM558228_MPI.406.CEL   GCB 0.119   0.002   0.879
112
GSM558229_MPI.410.CEL   GCB 0.045   0.392   0.563
113
GSM558230_MPI.411.CEL   GCB 0.096   0.004   0.9
114
GSM558231_MPI.412.CEL   TypeIII 0.486   0.047   0.467
115
GSM558232_MPI.413.CEL   GCB 0.167   0.281   0.552
116
GSM558233_MPI.414.CEL   TypeIII 0.367   0.356   0.276
117
GSM558234_MPI.416.CEL   ABC 0.246   0.679   0.075
118
GSM558235_MPI.418.CEL   ABC 0.101   0.883   0.016
119
GSM558236_MPI.419.CEL   ABC 0.136   0.603   0.261
120
GSM558237_MPI.423.CEL   GCB 0.121   0   0.879
121
GSM558238_MPI.424.CEL   ABC 0.116   0.823   0.061
122
GSM558239_MPI.427.CEL   GCB 0.391   0.051   0.558
123
GSM558240_MPI.434.CEL   ABC 0.15    0.788   0.062
124
GSM558241_MPI.435.CEL   GCB 0.128   0   0.872
125
GSM558242_MPI.436.CEL   GCB 0.094   0.008   0.898
126
GSM558243_MPI.438.CEL   TypeIII 0.518   0.075   0.406
127
GSM558244_MPI.439.CEL   GCB 0.123   0   0.877
128
GSM558245_MPI.440.CEL   TypeIII 0.75    0.174   0.076
129
GSM558246_MPI.441.CEL   TypeIII 0.515   0.027   0.458
130
GSM558247_MPI.443.CEL   TypeIII 0.571   0.415   0.014
131
GSM558248_MPI.453.CEL   ABC 0.096   0.853   0.051
132
GSM558249_MPI.503.CEL   TypeIII 0.652   0.024   0.324
133
GSM558250_MPI.513.CEL   GCB 0.124   0   0.876
134
GSM558251_MPI.514.CEL   GCB 0.058   0.343   0.599
135
GSM558252_MPI.537.CEL   GCB 0.479   0.02    0.5
136
GSM558253_MPI.539.CEL   GCB 0.057   0.257   0.685
137
GSM558254_MPI.541.CEL   ABC 0.42    0.507   0.072
138
GSM558255_MPI.543.CEL   TypeIII 0.737   0.009   0.254
139
GSM558256_MPI.546.CEL   GCB 0.086   0.003   0.911
140
GSM558257_MPI.547.CEL   GCB 0.144   0.001   0.855
141
GSM558258_MPI.548.CEL   TypeIII 0.863   0.115   0.021
142
GSM558259_MPI.550.CEL   TypeIII 0.819   0.139   0.042
143
GSM558260_MPI.552.CEL   ABC 0.156   0.759   0.086
144
GSM558261_MPI.553.CEL   TypeIII 0.559   0.376   0.064
145
GSM558262_MPI.554.CEL   GCB 0.094   0.003   0.903
146
GSM558263_MPI.555.CEL   GCB 0.097   0.003   0.899
147
GSM558264_MPI.556.CEL   GCB 0.348   0.002   0.65
148
GSM558265_MPI.557.CEL   ABC 0.274   0.643   0.083
149
GSM558266_MPI.558.CEL   GCB 0.179   0.004   0.816
150
GSM558267_MPI.559.CEL   TypeIII 0.607   0.274   0.119
151
GSM558268_MPI.560.CEL   TypeIII 0.493   0.349   0.158
152
GSM558269_MPI.566.CEL   ABC 0.133   0.855   0.012
153
GSM558270_MPI.582.CEL   TypeIII 0.56    0.007   0.433
154
GSM558271_MPI.599.CEL   ABC 0.141   0.774   0.085
155
GSM558272_MPI.624.CEL   TypeIII 0.533   0.023   0.444
156
GSM558273_MPI.626.CEL   GCB 0.086   0.004   0.911
157
GSM558274_MPI.628.CEL   GCB 0.086   0.003   0.911
158
GSM558275_MPI.630.CEL   GCB 0.087   0.005   0.908
159
GSM558276_MPI.634.CEL   TypeIII 0.605   0.035   0.359
160
GSM558277_MPI.635.CEL   GCB 0.092   0.025   0.883
161
GSM558278_MPI.637.CEL   GCB 0.126   0.005   0.869
162
GSM558279_MPI.638.CEL   GCB 0.138   0.223   0.64
163
GSM558280_MPI.641.CEL   GCB 0.107   0.02    0.873
164
GSM558281_MPI.644.CEL   GCB 0.086   0.003   0.911
165
GSM558282_MPI.646.CEL   GCB 0.115   0.011   0.873
166
GSM558283_MPI.647.CEL   TypeIII 0.557   0.014   0.429
167
GSM558284_MPI.648.CEL   GCB 0.173   0.014   0.813
168
GSM558285_MPI.649.CEL   GCB 0.173   0.257   0.57
169
GSM558286_MPI.650.CEL   GCB 0.023   0.127   0.85
170
GSM558287_MPI.651.CEL   GCB 0.132   0.002   0.866
171
GSM558288_MPI.652.CEL   GCB 0.245   0.249   0.506
172
GSM558289_MPI.654.CEL   GCB 0.122   0.393   0.485
173
GSM558290_MPI.655.CEL   ABC 0.169   0.752   0.08
174
GSM558291_MPI.656.CEL   GCB 0   0.091   0.909
175
GSM558292_MPI.657.CEL   TypeIII 0.758   0.047   0.195
176
GSM558293_MPI.660.CEL   TypeIII 0.499   0.015   0.486
177
GSM558294_MPI.661.CEL   GCB 0.005   0.088   0.907
178
GSM558295_MPI.663.CEL   ABC 0.131   0.869   0
179
GSM558296_MPI.664.CEL   GCB 0.167   0   0.833
180
GSM558297_MPI.665.CEL   ABC 0.084   0.477   0.439
181
GSM558298_MPI.667.CEL   GCB 0.157   0   0.843
182
GSM558299_MPI.679.CEL   GCB 0.109   0.008   0.883
183
GSM558300_MPI.684.CEL   ABC 0.134   0.758   0.107
184
GSM558301_MPI.686.CEL   GCB 0.102   0.003   0.895
185
GSM558302_MPI.688.CEL   TypeIII 0.4 0.309   0.291
186
GSM558303_MPI.689.CEL   GCB 0.088   0.016   0.896
187
GSM558304_MPI.691.CEL   GCB 0.07    0.111   0.819
188
GSM558305_MPI.692.CEL   ABC 0.211   0.721   0.068
189
GSM558306_MPI.693.CEL   TypeIII 0.648   0.014   0.339
190
GSM558307_MPI.694.CEL   TypeIII 0.572   0.005   0.423
191
GSM558308_MPI.695.CEL   ABC 0.302   0.682   0.016
192
GSM558309_MPI.696.CEL   ABC 0.16    0.826   0.015
193
GSM558310_MPI.699.CEL   ABC 0.101   0.884   0.015
194
GSM558311_MPI.702.CEL   GCB 0.136   0.25    0.614
195
GSM558312_MPI.703.CEL   GCB 0.281   0.051   0.668
196
GSM558313_MPI.704.CEL   GCB 0.154   0.005   0.841
197
GSM558314_MPI.705.CEL   TypeIII 0.673   0.242   0.084
198
GSM558315_MPI.706.CEL   ABC 0.415   0.563   0.022
199
GSM558316_MPI.708.CEL   TypeIII 0.457   0.457   0.086
200
GSM558317_MPI.713.CEL   GCB 0.18    0.048   0.772
201
GSM558318_MPI.714.CEL   TypeIII 0.83    0.018   0.152
202
GSM558319_MPI.716.CEL   GCB 0.347   0.003   0.65
203
GSM558320_MPI.723.CEL   GCB 0.118   0   0.881
204
GSM558321_MPI.724.CEL   GCB 0.163   0.137   0.701
205
GSM558322_MPI.730.CEL   GCB 0.118   0.03    0.851
206
GSM558323_MPI.731.CEL   ABC 0.18    0.81    0.01
207
GSM558324_MPI.732.CEL   GCB 0.095   0.03    0.875
208
GSM558325_MPI.733.CEL   GCB 0.311   0.037   0.652
209
GSM558326_MPI.734.CEL   ABC 0.117   0.842   0.041
210
GSM558327_MPI.735.CEL   GCB 0.086   0.006   0.908
211
GSM558328_MPI.737.CEL   ABC 0.15    0.604   0.246
212
GSM558329_MPI.744.CEL   GCB 0.022   0.121   0.858
213
GSM558330_MPI.745.CEL   ABC 0.314   0.648   0.039
214
GSM558331_MPI.746.CEL   GCB 0.118   0.061   0.821
215
GSM558332_MPI.748.CEL   GCB 0.088   0.007   0.906
216
GSM558333_MPI.749.CEL   GCB 0.087   0.013   0.899
217
GSM558334_MPI.755.CEL   GCB 0.31    0.24    0.45
218
GSM558335_MPI.756.CEL   GCB 0.092   0.007   0.901
219
GSM558336_MPI.757.CEL   GCB 0.118   0   0.882
220
GSM558337_MPI.760.CEL   GCB 0.141   0.045   0.814
221
GSM558338_MPI.761.CEL   ABC 0.112   0.818   0.07
222
GSM558339_MPI.762.CEL   ABC 0.349   0.622   0.029
223
GSM558340_MPI.765.CEL   TypeIII 0.764   0.037   0.199
224
GSM558341_MPI.766.CEL   TypeIII 0.782   0.042   0.176
225
GSM558342_MPI.767.CEL   GCB 0.156   0   0.843
226
GSM558343_MPI.768.CEL   GCB 0.144   0.011   0.844
227
GSM558344_MPI.769.CEL   ABC 0.105   0.887   0.008
228
GSM558345_MPI.780.CEL   GCB 0.142   0.063   0.795
229
GSM558346_MPI.781.CEL   TypeIII 0.83    0.144   0.026
230
GSM558347_MPI.782.CEL   TypeIII 0.529   0.424   0.047
231
GSM558348_MPI.783.CEL   GCB 0.086   0.003   0.911
232
GSM558349_MPI.788.CEL   GCB 0.103   0.016   0.882
233
GSM558350_MPI.789.CEL   ABC 0.396   0.581   0.022
234
GSM558351_MPI.790.CEL   ABC 0.434   0.52    0.046
235
GSM558352_MPI.791.CEL   ABC 0.365   0.618   0.017
236
GSM558353_MPI.792.CEL   GCB 0.185   0   0.815
237
GSM558354_MPI.794.CEL   ABC 0.161   0.828   0.011
238
GSM558355_MPI.795.CEL   ABC 0.218   0.611   0.172
239
GSM558356_MPI.796.CEL   GCB 0.159   0.023   0.818
240
GSM558357_MPI.797.CEL   ABC 0.175   0.772   0.053
241
GSM558358_MPI.798.CEL   TypeIII 0.493   0.018   0.489
242
GSM558359_MPI.799.CEL   GCB 0.089   0.006   0.905
243
GSM558360_MPI.800.CEL   GCB 0.034   0.212   0.754
244
GSM558361_MPI.801.CEL   GCB 0.454   0.002   0.544
245
GSM558362_MPI.802.CEL   GCB 0.116   0.016   0.869
246
GSM558363_MPI.806.CEL   ABC 0.19    0.523   0.288
247
GSM558364_MPI.807.CEL   ABC 0.203   0.714   0.083
248
GSM558365_MPI.808.CEL   GCB 0.095   0.005   0.9
249
GSM558366_MPI.810.CEL   GCB 0.27    0.009   0.721
250
GSM558367_MPI.811.CEL   GCB 0.086   0.003   0.91
251
GSM558368_MPI.812.CEL   GCB 0.329   0.087   0.584
252
GSM558369_MPI.813.CEL   GCB 0.047   0.158   0.794
253
GSM558370_MPI.814.CEL   GCB 0.086   0.003   0.911
254
GSM558371_MPI.815.CEL   GCB 0.086   0.003   0.911
255
GSM558372_MPI.816.CEL   GCB 0.086   0.003   0.911
256
GSM558373_MPI.817.CEL   GCB 0.088   0.003   0.908
257
GSM558374_MPI.818.CEL   GCB 0.219   0.008   0.773
258
GSM558375_MPI.820.CEL   ABC 0.293   0.563   0.143
259
GSM558376_MPI.821.CEL   ABC 0.15    0.811   0.039
260
GSM558377_MPI.822.CEL   ABC 0.092   0.899   0.009
261
GSM558378_MPI.823.CEL   GCB 0.047   0.373   0.581
262
GSM558379_MPI.826.CEL   GCB 0.086   0.003   0.911
263
GSM558380_MPI.827.CEL   ABC 0.179   0.548   0.272
264
GSM558381_MPI.830.CEL   GCB 0.242   0.025   0.733
265
GSM558382_MPI.832.CEL   ABC 0.377   0.559   0.063
266
GSM558383_MPI.834.CEL   TypeIII 0.54    0.45    0.01
267
GSM558384_MPI.835.CEL   GCB 0.004   0.108   0.888
268
GSM558385_MPI.839.CEL   TypeIII 0.725   0.262   0.014
269
GSM558386_MPI.840.CEL   ABC 0.246   0.413   0.341
270
GSM558387_MPI.841.CEL   ABC 0.135   0.856   0.009
271
GSM558388_MPI.842.CEL   ABC 0.116   0.831   0.053
272
GSM558389_MPI.843.CEL   GCB 0.049   0.303   0.649