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8_CTCL_QC.ipynb
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255.4 kB
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2025-04-21
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APC_1K_tech_cov_defaultscvi.ipynb
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1.1 MB
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2025-04-21
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Bulk_deconvolution_BayesPrism.ipynb
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788.1 kB
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2025-04-21
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CTCL_Tcell_TCR.ipynb
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2.6 MB
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2025-04-21
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Cellphonedb_plot.ipynb
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616.6 kB
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2025-04-21
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ExpressionSet_perparation.ipynb
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56.2 kB
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2025-04-21
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Milo_APC.ipynb
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1.6 MB
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2025-04-21
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Milo_Benign_T.ipynb
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3.8 MB
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2025-04-21
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Milo_overall.ipynb
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2.4 MB
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2025-04-21
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Milo_stroma.ipynb
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2.9 MB
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2025-04-21
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NMF_programs.ipynb
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743.8 kB
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2025-04-21
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Pseudobulk_CTCL_vs_others.ipynb
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206.4 kB
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2025-04-21
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Pseudobulk_malignant_cell_disease_stage.ipynb
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238.7 kB
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2025-04-21
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Pseudobulk_malignant_markers.ipynb
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217.1 kB
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2025-04-21
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Pseudobulk_skin_layer.ipynb
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222.6 kB
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2025-04-21
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Subcluster_Bcell_only_alldatasets.ipynb
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2.8 MB
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2025-04-21
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Th1_2_17_proportion.ipynb
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77.5 kB
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2025-04-21
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Volcano_DEGs.ipynb
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205.1 kB
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2025-04-21
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allctcl_4k_5dim_100hidd_reproduce.ipynb
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5.7 MB
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2025-04-21
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atlas_annotation-check.ipynb
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427.3 kB
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2025-04-21
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atlas_subset-tcells.ipynb
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9.2 MB
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2025-04-21
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cell2loc_estimate_signatures.py
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7.7 kB
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2025-04-21
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cell2loc_predict_cell_abundance.py
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4.5 kB
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2025-04-21
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cellphoneDB4.ipynb
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74.4 kB
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2025-04-21
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celltypist_allsamples.ipynb
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10.3 kB
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2025-04-21
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ctcl_visium_figures.R
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13.4 kB
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2025-04-21
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drug2cell_tumourcell_Bcell_only.ipynb
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370.6 kB
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2025-04-21
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install_renv.sh
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1.6 kB
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2025-04-21
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scvi_allsamples_4K_6dim_sampletype_cov_100hidd.ipynb
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3.6 MB
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2025-04-21
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skinatlas_samples_QC.ipynb
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907.9 kB
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2025-04-21
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stromal_final_2k_nhidden_120_6_8.ipynb
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723.2 kB
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2025-04-21
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visutils.R
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3.3 kB
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2025-04-21
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Datasets
Models
