clc

close all

clear variables

fclose('all');

addpath(genpath('./steps'));

addpath(genpath('./libraries'));

addpath(genpath('./functions'));

addpath(genpath('./util'));

dirUtilities = './libraries/lib_FQPath/utilities/';

%General parameters

savefile = 1;

logS = 1;

fidLogs{1} = 1; %stdoutput

%multi-core

numCoresFeatExtr = 8;

numCoresKnn = 2;

%ext

ext = 'tif';

%dirs

dirOrig = '.\imgs\orig\';

dirTest = '.\imgs\test\';

mkdir_pers(dirTest, savefile);

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

%A. process DB files

fprintf(1, 'Processing DB...\n\n\n');

step_A_process_ALL_IDB(dirOrig, dirTest, ext, fidLogs, savefile);

clc

close all

pause(1);

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

%B. registration

plotFigures = 0;

fprintf(1, 'Registering images...\n\n\n');

step_B_registration(dirTest, dirUtilities, ext, fidLogs, logS, savefile, plotFigures);

clc

close all

pause(1);

%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

%C. VAR-PCANet

plotFigures = 1;

fprintf(1, 'Adaptive unsharpening using VAR-PCANet...\n\n\n');

step_C_varpcanet(dirTest, dirUtilities, ext, numCoresFeatExtr, numCoresKnn, fidLogs, logS, savefile, plotFigures);