--- a +++ b/utils/autoanchor.py @@ -0,0 +1,169 @@ +# YOLOv5 🚀 by Ultralytics, AGPL-3.0 license +""" +AutoAnchor utils +""" + +import random + +import numpy as np +import torch +import yaml +from tqdm import tqdm + +from utils import TryExcept +from utils.general import LOGGER, TQDM_BAR_FORMAT, colorstr + +PREFIX = colorstr('AutoAnchor: ') + + +def check_anchor_order(m): + # Check anchor order against stride order for YOLOv5 Detect() module m, and correct if necessary + a = m.anchors.prod(-1).mean(-1).view(-1) # mean anchor area per output layer + da = a[-1] - a[0] # delta a + ds = m.stride[-1] - m.stride[0] # delta s + if da and (da.sign() != ds.sign()): # same order + LOGGER.info(f'{PREFIX}Reversing anchor order') + m.anchors[:] = m.anchors.flip(0) + + +@TryExcept(f'{PREFIX}ERROR') +def check_anchors(dataset, model, thr=4.0, imgsz=640): + # Check anchor fit to data, recompute if necessary + m = model.module.model[-1] if hasattr(model, 'module') else model.model[-1] # Detect() + shapes = imgsz * dataset.shapes / dataset.shapes.max(1, keepdims=True) + scale = np.random.uniform(0.9, 1.1, size=(shapes.shape[0], 1)) # augment scale + wh = torch.tensor(np.concatenate([l[:, 3:5] * s for s, l in zip(shapes * scale, dataset.labels)])).float() # wh + + def metric(k): # compute metric + r = wh[:, None] / k[None] + x = torch.min(r, 1 / r).min(2)[0] # ratio metric + best = x.max(1)[0] # best_x + aat = (x > 1 / thr).float().sum(1).mean() # anchors above threshold + bpr = (best > 1 / thr).float().mean() # best possible recall + return bpr, aat + + stride = m.stride.to(m.anchors.device).view(-1, 1, 1) # model strides + anchors = m.anchors.clone() * stride # current anchors + bpr, aat = metric(anchors.cpu().view(-1, 2)) + s = f'\n{PREFIX}{aat:.2f} anchors/target, {bpr:.3f} Best Possible Recall (BPR). ' + if bpr > 0.98: # threshold to recompute + LOGGER.info(f'{s}Current anchors are a good fit to dataset ✅') + else: + LOGGER.info(f'{s}Anchors are a poor fit to dataset ⚠️, attempting to improve...') + na = m.anchors.numel() // 2 # number of anchors + anchors = kmean_anchors(dataset, n=na, img_size=imgsz, thr=thr, gen=1000, verbose=False) + new_bpr = metric(anchors)[0] + if new_bpr > bpr: # replace anchors + anchors = torch.tensor(anchors, device=m.anchors.device).type_as(m.anchors) + m.anchors[:] = anchors.clone().view_as(m.anchors) + check_anchor_order(m) # must be in pixel-space (not grid-space) + m.anchors /= stride + s = f'{PREFIX}Done ✅ (optional: update model *.yaml to use these anchors in the future)' + else: + s = f'{PREFIX}Done ⚠️ (original anchors better than new anchors, proceeding with original anchors)' + LOGGER.info(s) + + +def kmean_anchors(dataset='./data/coco128.yaml', n=9, img_size=640, thr=4.0, gen=1000, verbose=True): + """ Creates kmeans-evolved anchors from training dataset + + Arguments: + dataset: path to data.yaml, or a loaded dataset + n: number of anchors + img_size: image size used for training + thr: anchor-label wh ratio threshold hyperparameter hyp['anchor_t'] used for training, default=4.0 + gen: generations to evolve anchors using genetic algorithm + verbose: print all results + + Return: + k: kmeans evolved anchors + + Usage: + from utils.autoanchor import *; _ = kmean_anchors() + """ + from scipy.cluster.vq import kmeans + + npr = np.random + thr = 1 / thr + + def metric(k, wh): # compute metrics + r = wh[:, None] / k[None] + x = torch.min(r, 1 / r).min(2)[0] # ratio metric + # x = wh_iou(wh, torch.tensor(k)) # iou metric + return x, x.max(1)[0] # x, best_x + + def anchor_fitness(k): # mutation fitness + _, best = metric(torch.tensor(k, dtype=torch.float32), wh) + return (best * (best > thr).float()).mean() # fitness + + def print_results(k, verbose=True): + k = k[np.argsort(k.prod(1))] # sort small to large + x, best = metric(k, wh0) + bpr, aat = (best > thr).float().mean(), (x > thr).float().mean() * n # best possible recall, anch > thr + s = f'{PREFIX}thr={thr:.2f}: {bpr:.4f} best possible recall, {aat:.2f} anchors past thr\n' \ + f'{PREFIX}n={n}, img_size={img_size}, metric_all={x.mean():.3f}/{best.mean():.3f}-mean/best, ' \ + f'past_thr={x[x > thr].mean():.3f}-mean: ' + for x in k: + s += '%i,%i, ' % (round(x[0]), round(x[1])) + if verbose: + LOGGER.info(s[:-2]) + return k + + if isinstance(dataset, str): # *.yaml file + with open(dataset, errors='ignore') as f: + data_dict = yaml.safe_load(f) # model dict + from utils.dataloaders import LoadImagesAndLabels + dataset = LoadImagesAndLabels(data_dict['train'], augment=True, rect=True) + + # Get label wh + shapes = img_size * dataset.shapes / dataset.shapes.max(1, keepdims=True) + wh0 = np.concatenate([l[:, 3:5] * s for s, l in zip(shapes, dataset.labels)]) # wh + + # Filter + i = (wh0 < 3.0).any(1).sum() + if i: + LOGGER.info(f'{PREFIX}WARNING ⚠️ Extremely small objects found: {i} of {len(wh0)} labels are <3 pixels in size') + wh = wh0[(wh0 >= 2.0).any(1)].astype(np.float32) # filter > 2 pixels + # wh = wh * (npr.rand(wh.shape[0], 1) * 0.9 + 0.1) # multiply by random scale 0-1 + + # Kmeans init + try: + LOGGER.info(f'{PREFIX}Running kmeans for {n} anchors on {len(wh)} points...') + assert n <= len(wh) # apply overdetermined constraint + s = wh.std(0) # sigmas for whitening + k = kmeans(wh / s, n, iter=30)[0] * s # points + assert n == len(k) # kmeans may return fewer points than requested if wh is insufficient or too similar + except Exception: + LOGGER.warning(f'{PREFIX}WARNING ⚠️ switching strategies from kmeans to random init') + k = np.sort(npr.rand(n * 2)).reshape(n, 2) * img_size # random init + wh, wh0 = (torch.tensor(x, dtype=torch.float32) for x in (wh, wh0)) + k = print_results(k, verbose=False) + + # Plot + # k, d = [None] * 20, [None] * 20 + # for i in tqdm(range(1, 21)): + # k[i-1], d[i-1] = kmeans(wh / s, i) # points, mean distance + # fig, ax = plt.subplots(1, 2, figsize=(14, 7), tight_layout=True) + # ax = ax.ravel() + # ax[0].plot(np.arange(1, 21), np.array(d) ** 2, marker='.') + # fig, ax = plt.subplots(1, 2, figsize=(14, 7)) # plot wh + # ax[0].hist(wh[wh[:, 0]<100, 0],400) + # ax[1].hist(wh[wh[:, 1]<100, 1],400) + # fig.savefig('wh.png', dpi=200) + + # Evolve + f, sh, mp, s = anchor_fitness(k), k.shape, 0.9, 0.1 # fitness, generations, mutation prob, sigma + pbar = tqdm(range(gen), bar_format=TQDM_BAR_FORMAT) # progress bar + for _ in pbar: + v = np.ones(sh) + while (v == 1).all(): # mutate until a change occurs (prevent duplicates) + v = ((npr.random(sh) < mp) * random.random() * npr.randn(*sh) * s + 1).clip(0.3, 3.0) + kg = (k.copy() * v).clip(min=2.0) + fg = anchor_fitness(kg) + if fg > f: + f, k = fg, kg.copy() + pbar.desc = f'{PREFIX}Evolving anchors with Genetic Algorithm: fitness = {f:.4f}' + if verbose: + print_results(k, verbose) + + return print_results(k).astype(np.float32)