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  • We use naming convention based on FreeSurfer except dgm.

DeepGM: Deep gray-matter structures

Label No. Structure Name Label No. Structure Name
1 Left-Thalamus-Proper 2 Right-Thalamus-Proper
3 Left-Caudate 4 Right-Caudate
5 Left-Putamen 6 Right-Putamen
7 Left-Pallidum 8 Right-Pallidum
9 Left-Hippocampus 10 Right-Hippocampus
11 Left-Amygdala 12 Right-Amygdala

ASEG labels

Label Structure Label Structure
2 Left Cerebral WM 41 Right Cerebral WM
3 Left Cerebral Cortex 42 Right Cerebral Cortex
4 Left Lateral Ventricle 43 Right Lateral Ventricle
5 Left Inf Lat Vent 44 Right Inf Lat Vent
7 Left Cerebellum WM 46 Right Cerebellum WM
8 Left Cerebellum Cortex 47 Right Cerebellum Cortex
10 Left Thalamus 49 Right Thalamus
11 Left Caudate 50 Right Caudate
12 Left Putamen 51 Right Putamen
13 Left Pallidum 52 Right Pallidum
14 3rd Ventricle 53 Right Hippocampus
15 4th Ventricle 54 Right Amygdala
16 Brain Stem 58 Right Accumbens area
17 Left Hippocampus 60 Right VentralDC
18 Left Amygdala 62 Right vessel
24 CSF 63 Right choroid plexus
26 Left Accumbens area 77 WM hypointensities
28 Left VentralDC 85 Optic Chiasm
30 Left vessel 251 CC Posterior
31 Left choroid plexus 252 CC Mid Posterior
253 CC Central
254 CC Mid Anterior
255 CC Anterior

DKT labels

ID LABEL ID LABEL
1002 ctx-lh-caudalanteriorcingulate 2002 ctx-rh-caudalanteriorcingulate
1003 ctx-lh-caudalmiddlefrontal 2003 ctx-rh-caudalmiddlefrontal
1005 ctx-lh-cuneus 2005 ctx-rh-cuneus
1006 ctx-lh-entorhinal 2006 ctx-rh-entorhinal
1007 ctx-lh-fusiform 2007 ctx-rh-fusiform
1008 ctx-lh-inferiorparietal 2008 ctx-rh-inferiorparietal
1009 ctx-lh-inferiortemporal 2009 ctx-rh-inferiortemporal
1010 ctx-lh-isthmuscingulate 2010 ctx-rh-isthmuscingulate
1011 ctx-lh-lateraloccipital 2011 ctx-rh-lateraloccipital
1012 ctx-lh-lateralorbitofrontal 2012 ctx-rh-lateralorbitofrontal
1013 ctx-lh-lingual 2013 ctx-rh-lingual
1014 ctx-lh-medialorbitofrontal 2014 ctx-rh-medialorbitofrontal
1015 ctx-lh-middletemporal 2015 ctx-rh-middletemporal
1016 ctx-lh-parahippocampal 2016 ctx-rh-parahippocampal
1017 ctx-lh-paracentral 2017 ctx-rh-paracentral
1018 ctx-lh-parsopercularis 2018 ctx-rh-parsopercularis
1019 ctx-lh-parsorbitalis 2019 ctx-rh-parsorbitalis
1020 ctx-lh-parstriangularis 2020 ctx-rh-parstriangularis
1021 ctx-lh-pericalcarine 2021 ctx-rh-pericalcarine
1022 ctx-lh-postcentral 2022 ctx-rh-postcentral
1023 ctx-lh-posteriorcingulate 2023 ctx-rh-posteriorcingulate
1024 ctx-lh-precentral 2024 ctx-rh-precentral
1025 ctx-lh-precuneus 2025 ctx-rh-precuneus
1026 ctx-lh-rostralanteriorcingulate 2026 ctx-rh-rostralanteriorcingulate
1027 ctx-lh-rostralmiddlefrontal 2027 ctx-rh-rostralmiddlefrontal
1028 ctx-lh-superiorfrontal 2028 ctx-rh-superiorfrontal
1029 ctx-lh-superiorparietal 2029 ctx-rh-superiorparietal
1030 ctx-lh-superiortemporal 2030 ctx-rh-superiortemporal
1031 ctx-lh-supramarginal 2031 ctx-rh-supramarginal
1034 ctx-lh-transversetemporal 2034 ctx-rh-transversetemporal
1035 ctx-lh-insula 2035 ctx-rh-insula

WMP labels

ID LABEL ID LABEL
251 CC_Posterior
252 CC_Mid_Posterior
253 CC_Central
254 CC_Mid_Anterior
255 CC_Anterior
3001 wm-lh-bankssts 4001 wm-rh-bankssts
3002 wm-lh-caudalanteriorcingulate 4002 wm-rh-caudalanteriorcingulate
3003 wm-lh-caudalmiddlefrontal 4003 wm-rh-caudalmiddlefrontal
3005 wm-lh-cuneus 4005 wm-rh-cuneus
3006 wm-lh-entorhinal 4006 wm-rh-entorhinal
3007 wm-lh-fusiform 4007 wm-rh-fusiform
3008 wm-lh-inferiorparietal 4008 wm-rh-inferiorparietal
3009 wm-lh-inferiortemporal 4009 wm-rh-inferiortemporal
3010 wm-lh-isthmuscingulate 4010 wm-rh-isthmuscingulate
3011 wm-lh-lateraloccipital 4011 wm-rh-lateraloccipital
3012 wm-lh-lateralorbitofrontal 4012 wm-rh-lateralorbitofrontal
3013 wm-lh-lingual 4013 wm-rh-lingual
3014 wm-lh-medialorbitofrontal 4014 wm-rh-medialorbitofrontal
3015 wm-lh-middletemporal 4015 wm-rh-middletemporal
3016 wm-lh-parahippocampal 4016 wm-rh-parahippocampal
3017 wm-lh-paracentral 4017 wm-rh-paracentral
3018 wm-lh-parsopercularis 4018 wm-rh-parsopercularis
3019 wm-lh-parsorbitalis 4019 wm-rh-parsorbitalis
3020 wm-lh-parstriangularis 4020 wm-rh-parstriangularis
3021 wm-lh-pericalcarine 4021 wm-rh-pericalcarine
3022 wm-lh-postcentral 4022 wm-rh-postcentral
3023 wm-lh-posteriorcingulate 4023 wm-rh-posteriorcingulate
3024 wm-lh-precentral 4024 wm-rh-precentral
3025 wm-lh-precuneus 4025 wm-rh-precuneus
3026 wm-lh-rostralanteriorcingulate 4026 wm-rh-rostralanteriorcingulate
3027 wm-lh-rostralmiddlefrontal 4027 wm-rh-rostralmiddlefrontal
3028 wm-lh-superiorfrontal 4028 wm-rh-superiorfrontal
3029 wm-lh-superiorparietal 4029 wm-rh-superiorparietal
3030 wm-lh-superiortemporal 4030 wm-rh-superiortemporal
3031 wm-lh-supramarginal 4031 wm-rh-supramarginal
3032 wm-lh-frontalpole 4032 wm-rh-frontalpole
3033 wm-lh-temporalpole 4033 wm-rh-temporalpole
3034 wm-lh-transversetemporal 4034 wm-rh-transversetemporal
3035 wm-lh-insula 4035 wm-rh-insula