--- a
+++ b/parameters_samples/parameter_sample.sh
@@ -0,0 +1,20 @@
+# affine transformation parameter for masking (for reg_aladin)
+# -nac: initialize transformation with nifty header (default: centre of image)
+# -cog: centor of mass/gravity of mask to initialize transformation (default: centre of image)
+affine_param="" # e.g. -rigOnly -nac
+
+# parameter for reg_resample
+resamp_param=""
+
+# parameter for seg_LabFusion in mas_masking
+labfusion_param=""
+
+# parameter for reg_f3d in mas_mapping
+nrr_param=""
+
+
+################################################################
+# AVOID define parameters for the following internal variable:
+# -mas_mapping_param, mas_fusion_param, mas_parcell_fusion_param
+# Otherwise, may cause program error
+################################################################
\ No newline at end of file