--- a +++ b/MRM_NeAT_Atlas_Label.txt @@ -0,0 +1,46 @@ +====== Atlas_index-anatomical_label mapping ===== + +1 Left Hippocampus +2 External Capsule +3 Left Caudate Putamen +4 Left Ant Commissure +5 Left Globus Pallidus +6 Left Internal Capsule +7 Left Thalamus +8 Left Cerebellum +9 Left Superior Colliculi +10 Ventricles +11 Left Hypothalamus +12 Left Inferior Colliculi +13 Left Central Gray +14 Left Neocortex +15 Left Amygdala +16 Left Olfactory bulb +17 Brain Stem +18 Left Rest of Midbrain +19 Left Basal Forebrain Septum +20 Left Fimbria +21 Right Hippocampus +22 None (Right External Capsule label merged into label 2, covering the entire Corpus Callosum region) +23 Right Caudate Putamen +24 Right Ant Commissure +25 Right Globus Pallidus +26 Right Internal Capsule +27 Right Thalamus +28 Right Cerebellum +29 Right Superior Colliculi +30 None (Right Ventricles label merged with label 10) +31 Right Hypothalamus +32 Right Inferior Colliculi +33 Right Central Gray +34 Right Neocortex +35 Right Amygdala +36 Right Olfactory bulb +37 None (Right Brain Stem label merged with label 17) +38 Right Rest of Midbrain +39 Right Basal Forebrain Septum +40 Right Fimbria + +======================== +The left/right hemisphere is separated using automatic mirroring/registration method. +The left/right part of the ventricles (10/30), brain stem (17/37) and External Capsule (2/22) as they're usually not considered as anatomically separable.