multi-atlas-segmentation / Git / Commit [a6edca]

Samuel Callahan

multi-atlas-segmentation

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Commit [a6edca] main

Initial commit

Authored by: SCallahan 2025-04-20

Browse code at this revision

Parent: [faff1e]

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added	depreciated/for_cluster/single_atlas_dice_step2.sh
added	depreciated/for_single_workstation/brain_extraction_batch.sh
added	depreciated/for_single_workstation/dilate_batch.sh
added	depreciated/for_single_workstation/labfusion.sh
added	depreciated/for_single_workstation/labfusion_batch.sh
added	depreciated/for_single_workstation/mask.sh
added	depreciated/for_single_workstation/mask_batch.sh
added	depreciated/for_single_workstation/parcellation.sh
added	depreciated/for_single_workstation/parcellation_batch.sh
added	docs/_config.yml
added	docs/groupwise_ex-vivo.png
added	docs/groupwise_in_vivo.png
added	docs/journal.pone.0086576.g001.png
added	docs/quickcheckdemo.png
added	parameters_samples/old_version/default_parameter_for_ex_vivo_coarse_step.sh
added	parameters_samples/old_version/default_parameter_for_ex_vivo_fine_step.sh
added	parameters_samples/old_version/default_parameter_for_in_vivo_coarse_step.sh
added	parameters_samples/old_version/default_parameter_for_in_vivo_fine_step.sh
added	parameters_samples/old_version/sample_parameter.sh
added	parameters_samples/parameter_sample.sh

depreciated/for_cluster/single_atlas_dice_step2.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/brain_extraction_batch.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/dilate_batch.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/labfusion.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/labfusion_batch.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/mask.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/mask_batch.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/parcellation.sh Diff Switch to side-by-side view

depreciated/for_single_workstation/parcellation_batch.sh Diff Switch to side-by-side view

docs/_config.yml Diff Switch to side-by-side view

docs/groupwise_ex-vivo.png

Binary file was added.

docs/groupwise_in_vivo.png

Binary file was added.

docs/journal.pone.0086576.g001.png

Binary file was added.

docs/quickcheckdemo.png

Binary file was added.

parameters_samples/old_version/default_parameter_for_ex_vivo_coarse_step.sh Diff Switch to side-by-side view

parameters_samples/old_version/default_parameter_for_ex_vivo_fine_step.sh Diff Switch to side-by-side view

parameters_samples/old_version/default_parameter_for_in_vivo_coarse_step.sh Diff Switch to side-by-side view

parameters_samples/old_version/default_parameter_for_in_vivo_fine_step.sh Diff Switch to side-by-side view

parameters_samples/old_version/sample_parameter.sh Diff Switch to side-by-side view

parameters_samples/parameter_sample.sh Diff Switch to side-by-side view

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