--- a +++ b/NAMESPACE @@ -0,0 +1,96 @@ +# Generated by roxygen2: do not edit by hand + +export(CT_Skull_Strip) +export(CT_Skull_Strip_register) +export(CT_Skull_Strip_robust) +export(CT_Skull_Strip_smooth) +export(CT_Skull_Stripper) +export(CT_Skull_Stripper_mask) +export(biometric_mask) +export(create_ct_head_mask) +export(ct_biometric_mask) +export(ct_dcm2nii) +export(ct_ear_mask) +export(ct_face_mask) +export(ct_template) +export(ct_template_fname) +export(dil_ero) +export(download_deepbleed_model) +export(get_neighbors) +export(ich_candidate_voxels) +export(ich_cnn_preprocess) +export(ich_predict) +export(ich_preprocess) +export(ich_process_predictors) +export(ich_segment) +export(ich_train_data) +export(ich_train_model) +export(load_deepbleed_model) +export(local_moment) +export(make_predictors) +export(mean_image) +export(mri_biometric_mask) +export(mri_ear_mask) +export(mri_face_mask) +export(predict_deepbleed) +export(register_deepbleed) +export(segment_ct_head) +export(segment_human) +import(randomForest) +importFrom(dcm2niir,check_dcm2nii) +importFrom(dcm2niir,dcm2nii) +importFrom(extrantsr,ants_apply_transforms) +importFrom(extrantsr,ants_bwlabel) +importFrom(extrantsr,bias_correct) +importFrom(extrantsr,double_remove_neck) +importFrom(extrantsr,otropos) +importFrom(extrantsr,perona_malik) +importFrom(extrantsr,reg_flip) +importFrom(extrantsr,registration) +importFrom(extrantsr,remove_neck) +importFrom(extrantsr,zscore_template) +importFrom(fslr,fsl_smooth) +importFrom(fslr,fslbet) +importFrom(fslr,fslerode) +importFrom(fslr,fslfill) +importFrom(fslr,fslmask) +importFrom(fslr,fslmaths) +importFrom(fslr,fslsmooth) +importFrom(fslr,fslthresh) +importFrom(fslr,get.imgext) +importFrom(fslr,have.fsl) +importFrom(fslr,mni_fname) +importFrom(fslr,reverse_rpi_orient) +importFrom(fslr,rpi_orient) +importFrom(magic,ashift) +importFrom(neurobase,check_mask_fail) +importFrom(neurobase,check_nifti) +importFrom(neurobase,check_outfile) +importFrom(neurobase,checkimg) +importFrom(neurobase,cog) +importFrom(neurobase,datatyper) +importFrom(neurobase,finite_img) +importFrom(neurobase,mask_img) +importFrom(neurobase,niftiarr) +importFrom(neurobase,nii.stub) +importFrom(neurobase,readnii) +importFrom(neurobase,remake_img) +importFrom(neurobase,rescale_img) +importFrom(neurobase,window_img) +importFrom(neurobase,writenii) +importFrom(neurobase,zero_pad) +importFrom(neurobase,zscore_img) +importFrom(oro.nifti,cal_img) +importFrom(oro.nifti,convert.bitpix) +importFrom(oro.nifti,convert.datatype) +importFrom(oro.nifti,drop_img_dim) +importFrom(oro.nifti,pixdim) +importFrom(oro.nifti,readNIfTI) +importFrom(oro.nifti,voxdim) +importFrom(oro.nifti,zero_trans) +importFrom(stats,as.formula) +importFrom(stats,complete.cases) +importFrom(stats,fft) +importFrom(stats,predict) +importFrom(stats,quantile) +importFrom(stats,sd)