|
a |
|
b/NAMESPACE |
|
|
1 |
# Generated by roxygen2: do not edit by hand |
|
|
2 |
|
|
|
3 |
export(CT_Skull_Strip) |
|
|
4 |
export(CT_Skull_Strip_register) |
|
|
5 |
export(CT_Skull_Strip_robust) |
|
|
6 |
export(CT_Skull_Strip_smooth) |
|
|
7 |
export(CT_Skull_Stripper) |
|
|
8 |
export(CT_Skull_Stripper_mask) |
|
|
9 |
export(biometric_mask) |
|
|
10 |
export(create_ct_head_mask) |
|
|
11 |
export(ct_biometric_mask) |
|
|
12 |
export(ct_dcm2nii) |
|
|
13 |
export(ct_ear_mask) |
|
|
14 |
export(ct_face_mask) |
|
|
15 |
export(ct_template) |
|
|
16 |
export(ct_template_fname) |
|
|
17 |
export(dil_ero) |
|
|
18 |
export(download_deepbleed_model) |
|
|
19 |
export(get_neighbors) |
|
|
20 |
export(ich_candidate_voxels) |
|
|
21 |
export(ich_cnn_preprocess) |
|
|
22 |
export(ich_predict) |
|
|
23 |
export(ich_preprocess) |
|
|
24 |
export(ich_process_predictors) |
|
|
25 |
export(ich_segment) |
|
|
26 |
export(ich_train_data) |
|
|
27 |
export(ich_train_model) |
|
|
28 |
export(load_deepbleed_model) |
|
|
29 |
export(local_moment) |
|
|
30 |
export(make_predictors) |
|
|
31 |
export(mean_image) |
|
|
32 |
export(mri_biometric_mask) |
|
|
33 |
export(mri_ear_mask) |
|
|
34 |
export(mri_face_mask) |
|
|
35 |
export(predict_deepbleed) |
|
|
36 |
export(register_deepbleed) |
|
|
37 |
export(segment_ct_head) |
|
|
38 |
export(segment_human) |
|
|
39 |
import(randomForest) |
|
|
40 |
importFrom(dcm2niir,check_dcm2nii) |
|
|
41 |
importFrom(dcm2niir,dcm2nii) |
|
|
42 |
importFrom(extrantsr,ants_apply_transforms) |
|
|
43 |
importFrom(extrantsr,ants_bwlabel) |
|
|
44 |
importFrom(extrantsr,bias_correct) |
|
|
45 |
importFrom(extrantsr,double_remove_neck) |
|
|
46 |
importFrom(extrantsr,otropos) |
|
|
47 |
importFrom(extrantsr,perona_malik) |
|
|
48 |
importFrom(extrantsr,reg_flip) |
|
|
49 |
importFrom(extrantsr,registration) |
|
|
50 |
importFrom(extrantsr,remove_neck) |
|
|
51 |
importFrom(extrantsr,zscore_template) |
|
|
52 |
importFrom(fslr,fsl_smooth) |
|
|
53 |
importFrom(fslr,fslbet) |
|
|
54 |
importFrom(fslr,fslerode) |
|
|
55 |
importFrom(fslr,fslfill) |
|
|
56 |
importFrom(fslr,fslmask) |
|
|
57 |
importFrom(fslr,fslmaths) |
|
|
58 |
importFrom(fslr,fslsmooth) |
|
|
59 |
importFrom(fslr,fslthresh) |
|
|
60 |
importFrom(fslr,get.imgext) |
|
|
61 |
importFrom(fslr,have.fsl) |
|
|
62 |
importFrom(fslr,mni_fname) |
|
|
63 |
importFrom(fslr,reverse_rpi_orient) |
|
|
64 |
importFrom(fslr,rpi_orient) |
|
|
65 |
importFrom(magic,ashift) |
|
|
66 |
importFrom(neurobase,check_mask_fail) |
|
|
67 |
importFrom(neurobase,check_nifti) |
|
|
68 |
importFrom(neurobase,check_outfile) |
|
|
69 |
importFrom(neurobase,checkimg) |
|
|
70 |
importFrom(neurobase,cog) |
|
|
71 |
importFrom(neurobase,datatyper) |
|
|
72 |
importFrom(neurobase,finite_img) |
|
|
73 |
importFrom(neurobase,mask_img) |
|
|
74 |
importFrom(neurobase,niftiarr) |
|
|
75 |
importFrom(neurobase,nii.stub) |
|
|
76 |
importFrom(neurobase,readnii) |
|
|
77 |
importFrom(neurobase,remake_img) |
|
|
78 |
importFrom(neurobase,rescale_img) |
|
|
79 |
importFrom(neurobase,window_img) |
|
|
80 |
importFrom(neurobase,writenii) |
|
|
81 |
importFrom(neurobase,zero_pad) |
|
|
82 |
importFrom(neurobase,zscore_img) |
|
|
83 |
importFrom(oro.nifti,cal_img) |
|
|
84 |
importFrom(oro.nifti,convert.bitpix) |
|
|
85 |
importFrom(oro.nifti,convert.datatype) |
|
|
86 |
importFrom(oro.nifti,drop_img_dim) |
|
|
87 |
importFrom(oro.nifti,pixdim) |
|
|
88 |
importFrom(oro.nifti,readNIfTI) |
|
|
89 |
importFrom(oro.nifti,voxdim) |
|
|
90 |
importFrom(oro.nifti,zero_trans) |
|
|
91 |
importFrom(stats,as.formula) |
|
|
92 |
importFrom(stats,complete.cases) |
|
|
93 |
importFrom(stats,fft) |
|
|
94 |
importFrom(stats,predict) |
|
|
95 |
importFrom(stats,quantile) |
|
|
96 |
importFrom(stats,sd) |