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			label="lr_flip_t1\ndesc: preproc"];
		18	[color="0.39 0.6 0.85",
			label="warp_t1_to_corobl_crop\nhemi: L"];
		18 -> 17;
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			label=n4_t1];
		19 -> 18;
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			label=reg_to_template];
		19 -> 23;
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			label="warp_t1_to_corobl_crop\nhemi: R"];
		19 -> 64;
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			label="import_t1\nsubject: 001"];
		20 -> 19;
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			label=compose_template_xfm_corobl];
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			label="template_xfm_itk2ras\nnative_modality: T1w"];
		21 -> 37;
		21 -> 64;
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			label="convert_template_xfm_ras2itk\nreg_suffix: T1w"];
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			label="qc_subfield\nspace: cropT1w"];
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			label="qc_subfield\nspace: cropT1w"];
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			label="qc_subfield_surf\nref_spaces: T1w"];
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			label="qc_subfield_surf\nref_spaces: T1w"];
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			label="qc_subfield_surf\nref_spaces: T1w"];
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			label=plot_subj_subfields];
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			label="get_subfield_vols_subj\ncrop_ref_spaces: cropT1w"];
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			label=warps
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			label="compose_warps_native_to_unfold\nnative_modality: T1w"];
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			label=compose_warps_unfold_to_crop_native];
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			label="create_unfold_ref\nautotop: hipp\nsubject: 001"];
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			label=create_unfold_coord_map];
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			label=create_warps_hipp];
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			label="compose_warps_native_to_unfold\nnative_modality: T1w"];
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			label=compose_warps_unfold_to_crop_native];
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			label=create_native_coord_ref];
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			label="create_native_coord_ref\nautotop: hipp"];
		72 -> 59;
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			label=create_warps_dentate];
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			label="compose_warps_native_to_unfold\nnative_modality: T1w"];
		100 -> 169;
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			label=compose_warps_unfold_to_crop_native];
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			label="create_unfold_ref\nautotop: dentate\nsubject: 001"];
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			label=create_unfold_coord_map];
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			label=create_warps_dentate];
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			label="compose_warps_native_to_unfold\nnative_modality: T1w"];
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			label=compose_warps_unfold_to_crop_native];
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			label=create_native_coord_ref];
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			label="create_native_coord_ref\nautotop: dentate"];
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			label="unflip_coords\nautotop: hipp\ndesc: laplace\nhemi: L"];
		12	[color="0.59 0.6 0.85",
			label=laplace_coords_hipp];
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			label="unflip_coords\nautotop: hipp\ndesc: laplace\nhemi: L"];
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			label=laplace_coords_hipp];
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			label="unflip_coords_equivol\ndesc: equivol\nhemi: L"];
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			label=equivolume_coords];
		32 -> 31;
		33	[color="0.13 0.6 0.85",
			label="prep_equivolume_coords\ndir: IO"];
		33 -> 32;
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			label=laplace_coords_hipp];
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			label=equivolume_coords];
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			label="prep_equivolume_coords\ndir: IO"];
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			label="unflip_coords\nautotop: dentate\ndesc: laplace\nhemi: L"];
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			label=laplace_coords_dentate];
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			label="unflip_coords\nautotop: dentate\ndesc: laplace\nhemi: L"];
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			label=laplace_coords_dentate];
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			label="unflip_coords\nautotop: dentate\ndesc: laplace\nhemi: L"];
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			label=laplace_coords_dentate];
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			label=laplace_coords_dentate];
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			label=laplace_coords_dentate];
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			label="unflip_coords\nautotop: hipp\ndesc: laplace\nhemi: L"];
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			label=laplace_coords_hipp];
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			label=laplace_coords_hipp];
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			label=preproc_t2
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	}
	subgraph cluster_9 {
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			label=gifti
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			label="merge_lr_spec_file\nautotop: hipp"];
		2	[color="0.15 0.6 0.85",
			label="create_spec_file_hipp\nlabel: hipp"];
		2 -> 1;
		3	[color="0.32 0.6 0.85",
			label=calculate_gyrification];
		3 -> 2;
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			label="create_dscalar_metric_cifti\nmetric: gyrification"];
		3 -> 53;
		4	[color="0.52 0.6 0.85",
			label="calculate_surface_area\nspace: T1w"];
		4 -> 3;
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			label=warp_gii_to_native];
		5 -> 2;
		5 -> 4;
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			label="smooth_surface\nspace: T1w"];
		5 -> 39;
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: hipp\ndensity: 0p5mm\nhemi: L\nsubject: 001\nsurfname: midthickness"];
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			label=calculate_curvature_from_surface];
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			label="create_dscalar_metric_cifti\nmetric: curvature"];
		38 -> 75;
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			label="calculate_thickness_from_surface\nspace: T1w"];
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			label="create_dscalar_metric_cifti\nmetric: thickness"];
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			label=warp_gii_to_native];
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			label=correct_nan_vertices];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: hipp\ndensity: 0p5mm\nhemi: L\nsubject: 001\nsurfname: inner"];
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			label=warp_gii_to_native];
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: hipp\ndensity: 0p5mm\nhemi: L\nsubject: 001\nsurfname: outer"];
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			label="nii_to_label_gii\ndensity: 0p5mm\nspace: T1w"];
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			label="resample_atlas_to_refvol\natlas: bigbrain\nhemi: L"];
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			label="create_spec_file_hipp\nlabel: hipp"];
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			label=calculate_gyrification];
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			label="calculate_surface_area\nspace: T1w"];
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			label=warp_gii_to_native];
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			label="smooth_surface\nspace: T1w"];
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: hipp\ndensity: 0p5mm\nhemi: R\nsubject: 001\nsurfname: midthickness"];
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			label=calculate_curvature_from_surface];
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			label="calculate_thickness_from_surface\nspace: T1w"];
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			label=warp_gii_to_native];
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: hipp\ndensity: 0p5mm\nhemi: R\nsubject: 001\nsurfname: inner"];
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			label=warp_gii_to_native];
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: hipp\ndensity: 0p5mm\nhemi: R\nsubject: 001\nsurfname: outer"];
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			label="nii_to_label_gii\ndensity: 0p5mm\nspace: T1w"];
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			label="resample_atlas_to_refvol\natlas: bigbrain\nhemi: R"];
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			label="merge_lr_spec_file\nautotop: dentate"];
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			label="create_spec_file_dentate\nlabel: dentate"];
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			label=calculate_gyrification];
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			label="create_dscalar_metric_cifti\nmetric: gyrification"];
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			label="calculate_surface_area\nspace: T1w"];
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			label="smooth_surface\nspace: T1w"];
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: dentate\ndensity: 0p5mm\nhemi: L\nsubject: 001\nsurfname: midthickness"];
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			label=calculate_curvature_from_surface];
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			label="create_dscalar_metric_cifti\nmetric: curvature"];
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			label="create_spec_file_dentate\nlabel: dentate"];
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			label=calculate_gyrification];
		118 -> 117;
		118 -> 136;
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			label="calculate_surface_area\nspace: T1w"];
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			label=warp_gii_to_native];
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			label="smooth_surface\nspace: T1w"];
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			label=correct_nan_vertices];
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			label=warp_gii_unfold2native];
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			label=constrain_surf_to_bbox];
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			label="cp_template_to_unfold\nautotop: dentate\ndensity: 0p5mm\nhemi: R\nsubject: 001\nsurfname: midthickness"];
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		132 -> 136;
		133 -> 94;
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			label=calculate_curvature_from_surface];
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		134 -> 136;
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		136 -> 93;
	}
	subgraph cluster_12 {
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			label=nnunet
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			label="run_inference\nhemi: Lflip"];
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			label="unflip_nnunet_nii\nhemi: L"];
		16 -> 188;
		63	[color="0.11 0.6 0.85",
			label=run_inference];
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			label=qc_nnunet_f3d];
		63 -> 190;
		186	[color="0.44 0.6 0.85",
			label=qc_nnunet_dice];
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			label=qc_nnunet_f3d];
		187 -> 186;
		188 -> 187;
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			label=qc_nnunet_dice];
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			label=shape_inject
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			label=reinsert_subject_labels];
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			label="unflip_postproc\nhemi: L"];
		13 -> 139;
		14	[color="0.66 0.6 0.85",
			label=template_shape_inject];
		14 -> 13;
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			label="import_template_shape\nsubject: 001"];
		15 -> 14;
		25	[color="0.31 0.6 0.85",
			label="prep_segs_for_greedy\nprefix: work/sub-001/anat/sub-001_space-template_desc-hipptissue"];
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			label=template_shape_inject];
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			label="template_shape_reg\nhemi: Lflip\nsubject: 001"];
		24 -> 14;
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			label="inject_init_laplace_coords\nautotop: hipp\ndir: AP"];
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			label="inject_init_laplace_coords\nautotop: hipp\ndir: PD"];
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			label="inject_init_laplace_coords\nautotop: dentate\ndir: AP"];
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			label="inject_init_laplace_coords\nautotop: dentate\ndir: PD"];
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			label="inject_init_laplace_coords\nautotop: dentate\ndir: IO"];
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			label="inject_init_laplace_coords\nautotop: hipp\ndir: IO"];
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			label="template_shape_reg\nhemi: R\nsubject: 001"];
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			label="prep_segs_for_greedy\nprefix: work/sub-001/anat/sub-001_hemi-Lflip_space-corobl_desc-nnunet"];
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			label=reinsert_subject_labels];
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			label="inject_init_laplace_coords\nautotop: hipp\ndir: AP"];
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			label="inject_init_laplace_coords\nautotop: hipp\ndir: PD"];
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			label="inject_init_laplace_coords\nautotop: dentate\ndir: AP"];
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			label="inject_init_laplace_coords\nautotop: dentate\ndir: PD"];
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			label="inject_init_laplace_coords\nautotop: dentate\ndir: IO"];
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			label="inject_init_laplace_coords\nautotop: hipp\ndir: IO"];
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			label="prep_segs_for_greedy\nprefix: work/sub-001/anat/sub-001_hemi-R_space-corobl_desc-nnunet"];
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	}
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		graph [color=blue,
			label=subfields
		];
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			label=combine_tissue_subfield_labels_corobl];
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			label="resample_subfields_to_native\nnative_modality: T1w"];
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		140	[color="0.02 0.6 0.85",
			label=label_subfields_from_vol_coords_corobl];
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			label=combine_tissue_subfield_labels_corobl];
		147	[color="0.25 0.6 0.85",
			label="resample_subfields_to_native\nnative_modality: T1w"];
		144 -> 147;
		145	[color="0.02 0.6 0.85",
			label=label_subfields_from_vol_coords_corobl];
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	}
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		graph [color=blue,
			label=resample_final_to_crop_native
		];
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			label=resample_subfields_native_crop];
		141	[color="0.61 0.6 0.85",
			label=create_native_crop_ref];
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			label=resample_coords_native_crop];
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			label=resample_coords_native_crop];
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			label=resample_coords_native_crop];
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			label=resample_coords_native_crop];
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			label=resample_coords_native_crop];
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			label=resample_coords_native_crop];
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			label="resample_coords_native_crop\nautotop: hipp"];
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			label=resample_native_to_crop];
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			label=resample_subfields_native_crop];
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			label=create_native_crop_ref];
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			label="resample_coords_native_crop\nautotop: hipp\ndesc: laplace"];
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			label="resample_coords_native_crop\nautotop: dentate\ndesc: laplace"];
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			label="resample_coords_native_crop\nautotop: hipp\ndesc: laplace"];
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			label="resample_coords_native_crop\nautotop: dentate\ndesc: laplace"];
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			label="resample_coords_native_crop\nautotop: hipp\ndesc: laplace"];
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			label="resample_coords_native_crop\nautotop: dentate\ndesc: laplace"];
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			label="resample_coords_native_crop\nautotop: hipp\ndesc: equivol"];
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			label=resample_native_to_crop];
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	subgraph cluster_14 {
		graph [color=blue,
			label=common
		];
	}
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}