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a |
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b/environment.yml |
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1 |
name: medi |
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2 |
channels: |
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3 |
- pytorch |
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4 |
- plotly |
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5 |
- nvidia |
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- conda-forge |
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7 |
- defaults |
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8 |
dependencies: |
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9 |
- _libgcc_mutex=0.1=conda_forge |
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10 |
- _openmp_mutex=4.5=2_gnu |
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11 |
- absl-py=1.3.0=py38h06a4308_0 |
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12 |
- anyio=3.5.0=py38h06a4308_0 |
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13 |
- argon2-cffi=21.3.0=pyhd3eb1b0_0 |
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14 |
- argon2-cffi-bindings=21.2.0=py38h7f8727e_0 |
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15 |
- asttokens=2.0.5=pyhd3eb1b0_0 |
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16 |
- attrs=22.1.0=py38h06a4308_0 |
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17 |
- babel=2.11.0=py38h06a4308_0 |
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18 |
- backcall=0.2.0=pyhd3eb1b0_0 |
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19 |
- backports=1.1=pyhd3eb1b0_0 |
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20 |
- backports.functools_lru_cache=1.6.4=pyhd3eb1b0_0 |
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21 |
- beautifulsoup4=4.11.1=py38h06a4308_0 |
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22 |
- blas=1.0=mkl |
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23 |
- bleach=4.1.0=pyhd3eb1b0_0 |
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24 |
- brotli=1.0.9=h5eee18b_7 |
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25 |
- brotli-bin=1.0.9=h5eee18b_7 |
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26 |
- brotlipy=0.7.0=py38h27cfd23_1003 |
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27 |
- bzip2=1.0.8=h7b6447c_0 |
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28 |
- ca-certificates=2023.01.10=h06a4308_0 |
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29 |
- certifi=2022.12.7=py38h06a4308_0 |
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30 |
- cffi=1.15.1=py38h74dc2b5_0 |
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31 |
- charset-normalizer=2.0.4=pyhd3eb1b0_0 |
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32 |
- click=8.0.4=py38h06a4308_0 |
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33 |
- cloudpickle=2.0.0=pyhd3eb1b0_0 |
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34 |
- comm=0.1.2=py38h06a4308_0 |
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35 |
- contourpy=1.0.5=py38hdb19cb5_0 |
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36 |
- cryptography=38.0.4=py38h9ce1e76_0 |
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37 |
- cuda=11.6.1=0 |
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38 |
- cuda-cccl=11.6.55=hf6102b2_0 |
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39 |
- cuda-command-line-tools=11.6.2=0 |
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40 |
- cuda-compiler=11.6.2=0 |
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41 |
- cuda-cudart=11.6.55=he381448_0 |
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42 |
- cuda-cudart-dev=11.6.55=h42ad0f4_0 |
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43 |
- cuda-cuobjdump=11.6.124=h2eeebcb_0 |
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44 |
- cuda-cupti=11.6.124=h86345e5_0 |
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45 |
- cuda-cuxxfilt=11.6.124=hecbf4f6_0 |
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46 |
- cuda-driver-dev=11.6.55=0 |
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47 |
- cuda-gdb=12.0.140=0 |
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48 |
- cuda-libraries=11.6.1=0 |
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49 |
- cuda-libraries-dev=11.6.1=0 |
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50 |
- cuda-memcheck=11.8.86=0 |
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51 |
- cuda-nsight=12.0.140=0 |
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52 |
- cuda-nsight-compute=12.0.1=0 |
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53 |
- cuda-nvcc=11.6.124=hbba6d2d_0 |
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54 |
- cuda-nvdisasm=12.0.140=0 |
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55 |
- cuda-nvml-dev=11.6.55=haa9ef22_0 |
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56 |
- cuda-nvprof=12.0.146=0 |
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57 |
- cuda-nvprune=11.6.124=he22ec0a_0 |
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58 |
- cuda-nvrtc=11.6.124=h020bade_0 |
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59 |
- cuda-nvrtc-dev=11.6.124=h249d397_0 |
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60 |
- cuda-nvtx=11.6.124=h0630a44_0 |
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61 |
- cuda-nvvp=12.0.146=0 |
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62 |
- cuda-runtime=11.6.1=0 |
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63 |
- cuda-samples=11.6.101=h8efea70_0 |
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64 |
- cuda-sanitizer-api=12.0.140=0 |
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65 |
- cuda-toolkit=11.6.1=0 |
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66 |
- cuda-tools=11.6.1=0 |
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67 |
- cuda-visual-tools=11.6.1=0 |
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68 |
- cudatoolkit=11.3.1=h2bc3f7f_2 |
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69 |
- cycler=0.11.0=pyhd3eb1b0_0 |
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70 |
- debugpy=1.5.1=py38h295c915_0 |
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71 |
- decorator=5.1.1=pyhd3eb1b0_0 |
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72 |
- defusedxml=0.7.1=pyhd3eb1b0_0 |
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73 |
- dm-tree=0.1.7=py38h6a678d5_1 |
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74 |
- entrypoints=0.4=py38h06a4308_0 |
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75 |
- executing=0.8.3=pyhd3eb1b0_0 |
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76 |
- ffmpeg=4.2.2=h20bf706_0 |
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77 |
- fftw=3.3.9=h27cfd23_1 |
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78 |
- filelock=3.9.0=py38h06a4308_0 |
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79 |
- flit-core=3.6.0=pyhd3eb1b0_0 |
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80 |
- freetype=2.11.0=h70c0345_0 |
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81 |
- future=0.18.2=py38_1 |
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82 |
- gast=0.5.3=pyhd3eb1b0_0 |
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83 |
- gds-tools=1.5.1.14=0 |
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84 |
- giflib=5.2.1=h5eee18b_1 |
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85 |
- gmp=6.2.1=h295c915_3 |
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86 |
- gnutls=3.6.15=he1e5248_0 |
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87 |
- huggingface_hub=0.10.1=py38h06a4308_0 |
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88 |
- icu=58.2=he6710b0_3 |
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89 |
- idna=3.4=py38h06a4308_0 |
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90 |
- importlib_metadata=4.11.3=hd3eb1b0_0 |
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91 |
- importlib_resources=5.2.0=pyhd3eb1b0_1 |
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92 |
- intel-openmp=2021.4.0=h06a4308_3561 |
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93 |
- ipykernel=6.19.2=py38hb070fc8_0 |
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94 |
- ipython=8.10.0=py38h06a4308_0 |
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95 |
- ipython_genutils=0.2.0=pyhd3eb1b0_1 |
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96 |
- ipywidgets=7.6.5=pyhd3eb1b0_1 |
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97 |
- jedi=0.18.1=py38h06a4308_1 |
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98 |
- jinja2=3.1.2=py38h06a4308_0 |
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99 |
- jpeg=9e=h7f8727e_0 |
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100 |
- json5=0.9.6=pyhd3eb1b0_0 |
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101 |
- jsonschema=4.17.3=py38h06a4308_0 |
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102 |
- jupyter_client=7.4.9=py38h06a4308_0 |
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103 |
- jupyter_core=5.2.0=py38h06a4308_0 |
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104 |
- jupyter_server=1.23.4=py38h06a4308_0 |
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105 |
- jupyterlab=3.5.3=py38h06a4308_0 |
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106 |
- jupyterlab_pygments=0.1.2=py_0 |
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107 |
- jupyterlab_server=2.16.5=py38h06a4308_0 |
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108 |
- jupyterlab_widgets=1.0.0=pyhd3eb1b0_1 |
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109 |
- kiwisolver=1.4.4=py38h6a678d5_0 |
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110 |
- lame=3.100=h7b6447c_0 |
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111 |
- lcms2=2.12=h3be6417_0 |
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112 |
- ld_impl_linux-64=2.38=h1181459_1 |
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113 |
- lerc=3.0=h295c915_0 |
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114 |
- libbrotlicommon=1.0.9=h5eee18b_7 |
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115 |
- libbrotlidec=1.0.9=h5eee18b_7 |
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116 |
- libbrotlienc=1.0.9=h5eee18b_7 |
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117 |
- libcublas=11.9.2.110=h5e84587_0 |
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118 |
- libcublas-dev=11.9.2.110=h5c901ab_0 |
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119 |
- libcufft=10.7.1.112=hf425ae0_0 |
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120 |
- libcufft-dev=10.7.1.112=ha5ce4c0_0 |
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121 |
- libcufile=1.5.1.14=0 |
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122 |
- libcufile-dev=1.5.1.14=0 |
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123 |
- libcurand=10.3.1.124=0 |
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124 |
- libcurand-dev=10.3.1.124=0 |
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125 |
- libcusolver=11.3.4.124=h33c3c4e_0 |
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126 |
- libcusparse=11.7.2.124=h7538f96_0 |
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127 |
- libcusparse-dev=11.7.2.124=hbbe9722_0 |
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128 |
- libdeflate=1.8=h7f8727e_5 |
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|
129 |
- libffi=3.3=he6710b0_2 |
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130 |
- libgcc-ng=12.1.0=h8d9b700_16 |
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131 |
- libgfortran-ng=11.2.0=h00389a5_1 |
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132 |
- libgfortran5=11.2.0=h1234567_1 |
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133 |
- libgomp=12.1.0=h8d9b700_16 |
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134 |
- libiconv=1.16=h7f8727e_2 |
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135 |
- libidn2=2.3.2=h7f8727e_0 |
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136 |
- libnpp=11.6.3.124=hd2722f0_0 |
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137 |
- libnpp-dev=11.6.3.124=h3c42840_0 |
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|
138 |
- libnsl=2.0.0=h5eee18b_0 |
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139 |
- libnvjpeg=11.6.2.124=hd473ad6_0 |
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|
140 |
- libnvjpeg-dev=11.6.2.124=hb5906b9_0 |
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141 |
- libopus=1.3.1=h7b6447c_0 |
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142 |
- libpng=1.6.37=hbc83047_0 |
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143 |
- libprotobuf=3.20.1=h4ff587b_0 |
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144 |
- libsodium=1.0.18=h7b6447c_0 |
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145 |
- libsqlite=3.39.2=h753d276_1 |
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146 |
- libstdcxx-ng=11.2.0=h1234567_1 |
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147 |
- libtasn1=4.16.0=h27cfd23_0 |
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148 |
- libtiff=4.4.0=hecacb30_0 |
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149 |
- libunistring=0.9.10=h27cfd23_0 |
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150 |
- libuuid=1.41.5=h5eee18b_0 |
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151 |
- libvpx=1.7.0=h439df22_0 |
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152 |
- libwebp=1.2.4=h11a3e52_0 |
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153 |
- libwebp-base=1.2.4=h5eee18b_0 |
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154 |
- libxml2=2.9.14=h74e7548_0 |
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155 |
- libxslt=1.1.35=h4e12654_0 |
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156 |
- libzlib=1.2.12=h166bdaf_2 |
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157 |
- lxml=4.9.1=py38h1edc446_0 |
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158 |
- lz4-c=1.9.4=h6a678d5_0 |
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|
159 |
- markupsafe=2.1.1=py38h7f8727e_0 |
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160 |
- matplotlib-base=3.6.2=py38h945d387_0 |
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161 |
- matplotlib-inline=0.1.6=py38h06a4308_0 |
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162 |
- mistune=2.0.4=py38h06a4308_0 |
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163 |
- mkl=2021.4.0=h06a4308_640 |
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164 |
- mkl-service=2.4.0=py38h7f8727e_0 |
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165 |
- mkl_fft=1.3.1=py38hd3c417c_0 |
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|
166 |
- mkl_random=1.2.2=py38h51133e4_0 |
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167 |
- mnist=0.2.2=py_0 |
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|
168 |
- munkres=1.1.4=py_0 |
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169 |
- nbclassic=0.4.8=py38h06a4308_0 |
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170 |
- nbclient=0.5.13=py38h06a4308_0 |
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171 |
- nbconvert=7.0.0=pyhd8ed1ab_0 |
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172 |
- nbconvert-core=7.0.0=pyhd8ed1ab_0 |
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173 |
- nbconvert-pandoc=7.0.0=pyhd8ed1ab_0 |
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174 |
- nbformat=5.7.0=py38h06a4308_0 |
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175 |
- ncurses=6.4=h6a678d5_0 |
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176 |
- nest-asyncio=1.5.6=py38h06a4308_0 |
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|
177 |
- nettle=3.7.3=hbbd107a_1 |
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|
178 |
- ninja=1.10.2=h06a4308_5 |
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|
179 |
- ninja-base=1.10.2=hd09550d_5 |
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|
180 |
- nltk=3.7=pyhd3eb1b0_0 |
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181 |
- nose=1.3.7=pyhd3eb1b0_1008 |
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182 |
- notebook=6.5.2=py38h06a4308_0 |
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183 |
- notebook-shim=0.2.2=py38h06a4308_0 |
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184 |
- nsight-compute=2022.4.1.6=0 |
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185 |
- openh264=2.1.1=h4ff587b_0 |
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186 |
- openssl=1.1.1t=h7f8727e_0 |
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187 |
- packaging=22.0=py38h06a4308_0 |
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|
188 |
- pandoc=2.12=h06a4308_1 |
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|
189 |
- pandocfilters=1.5.0=pyhd3eb1b0_0 |
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|
190 |
- parso=0.8.3=pyhd3eb1b0_0 |
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|
191 |
- pexpect=4.8.0=pyhd3eb1b0_3 |
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192 |
- pickleshare=0.7.5=pyhd3eb1b0_1003 |
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|
193 |
- pip=22.3.1=py38h06a4308_0 |
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|
194 |
- pkgutil-resolve-name=1.3.10=py38h06a4308_0 |
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|
195 |
- platformdirs=2.5.2=py38h06a4308_0 |
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|
196 |
- plotly=5.13.1=py_0 |
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197 |
- pooch=1.4.0=pyhd3eb1b0_0 |
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|
198 |
- prometheus_client=0.14.1=py38h06a4308_0 |
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|
199 |
- prompt-toolkit=3.0.36=py38h06a4308_0 |
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|
200 |
- psutil=5.9.0=py38h5eee18b_0 |
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|
201 |
- ptyprocess=0.7.0=pyhd3eb1b0_2 |
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|
202 |
- pure_eval=0.2.2=pyhd3eb1b0_0 |
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|
203 |
- pycodestyle=2.10.0=py38h06a4308_0 |
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|
204 |
- pycparser=2.21=pyhd3eb1b0_0 |
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|
205 |
- pygments=2.11.2=pyhd3eb1b0_0 |
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|
206 |
- pyopenssl=22.0.0=pyhd3eb1b0_0 |
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|
207 |
- pyparsing=3.0.9=py38h06a4308_0 |
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|
208 |
- pyrsistent=0.18.0=py38heee7806_0 |
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|
209 |
- pysocks=1.7.1=py38h06a4308_0 |
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|
210 |
- python=3.8.13=haa1d7c7_1 |
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|
211 |
- python-dateutil=2.8.2=pyhd3eb1b0_0 |
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|
212 |
- python-fastjsonschema=2.16.2=py38h06a4308_0 |
|
|
213 |
- python_abi=3.8=2_cp38 |
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|
214 |
- pytorch=1.13.1=py3.8_cuda11.6_cudnn8.3.2_0 |
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|
215 |
- pytorch-cuda=11.6=h867d48c_1 |
|
|
216 |
- pytorch-mutex=1.0=cuda |
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|
217 |
- pytz=2022.7=py38h06a4308_0 |
|
|
218 |
- pyyaml=6.0=py38h5eee18b_1 |
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|
219 |
- pyzmq=23.2.0=py38h6a678d5_0 |
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|
220 |
- readline=8.2=h5eee18b_0 |
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|
221 |
- regex=2022.7.9=py38h5eee18b_0 |
|
|
222 |
- requests=2.28.1=py38h06a4308_0 |
|
|
223 |
- send2trash=1.8.0=pyhd3eb1b0_1 |
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|
224 |
- six=1.16.0=pyhd3eb1b0_1 |
|
|
225 |
- sniffio=1.2.0=py38h06a4308_1 |
|
|
226 |
- soupsieve=2.3.2.post1=py38h06a4308_0 |
|
|
227 |
- sqlite=3.39.3=h5082296_0 |
|
|
228 |
- stack_data=0.2.0=pyhd3eb1b0_0 |
|
|
229 |
- tenacity=8.0.1=py38h06a4308_1 |
|
|
230 |
- tensorflow-probability=0.14.0=pyhd3eb1b0_0 |
|
|
231 |
- terminado=0.17.1=py38h06a4308_0 |
|
|
232 |
- timm=0.6.12=pyhd8ed1ab_0 |
|
|
233 |
- tinycss2=1.2.1=py38h06a4308_0 |
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|
234 |
- tk=8.6.12=h1ccaba5_0 |
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|
235 |
- tomli=2.0.1=py38h06a4308_0 |
|
|
236 |
- torchaudio=0.13.1=py38_cu116 |
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|
237 |
- torchvision=0.14.1=py38_cu116 |
|
|
238 |
- tornado=6.2=py38h5eee18b_0 |
|
|
239 |
- traitlets=5.7.1=py38h06a4308_0 |
|
|
240 |
- typing-extensions=4.4.0=py38h06a4308_0 |
|
|
241 |
- typing_extensions=4.4.0=py38h06a4308_0 |
|
|
242 |
- urllib3=1.26.14=py38h06a4308_0 |
|
|
243 |
- wcwidth=0.2.5=pyhd3eb1b0_0 |
|
|
244 |
- webencodings=0.5.1=py38_1 |
|
|
245 |
- websocket-client=0.58.0=py38h06a4308_4 |
|
|
246 |
- wheel=0.38.4=py38h06a4308_0 |
|
|
247 |
- widgetsnbextension=3.5.2=py38h06a4308_0 |
|
|
248 |
- x264=1!157.20191217=h7b6447c_0 |
|
|
249 |
- xz=5.2.10=h5eee18b_1 |
|
|
250 |
- yaml=0.2.5=h7b6447c_0 |
|
|
251 |
- zeromq=4.3.4=h2531618_0 |
|
|
252 |
- zlib=1.2.12=h7f8727e_2 |
|
|
253 |
- zstd=1.5.2=ha4553b6_0 |
|
|
254 |
- pip: |
|
|
255 |
- appdirs==1.4.4 |
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|
256 |
- brewer2mpl==1.4.1 |
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|
257 |
- fonttools==4.37.1 |
|
|
258 |
- h5py==3.7.0 |
|
|
259 |
- imageio==2.21.1 |
|
|
260 |
- importlib-metadata==6.1.0 |
|
|
261 |
- joblib==1.2.0 |
|
|
262 |
- jupyter-http-over-ws==0.0.8 |
|
|
263 |
- llvmlite==0.39.1 |
|
|
264 |
- lock==2018.3.25.2110 |
|
|
265 |
- matplotlib==3.5.3 |
|
|
266 |
- networkx==2.8.6 |
|
|
267 |
- numba==0.56.4 |
|
|
268 |
- numpy==1.23.2 |
|
|
269 |
- opencv-python==4.7.0.68 |
|
|
270 |
- pandas==1.5.3 |
|
|
271 |
- patsy==0.5.3 |
|
|
272 |
- phasepack==1.5 |
|
|
273 |
- pillow==9.2.0 |
|
|
274 |
- pillow-simd==9.0.0.post1 |
|
|
275 |
- pyfftw==0.13.1 |
|
|
276 |
- pynndescent==0.5.8 |
|
|
277 |
- pywavelets==1.3.0 |
|
|
278 |
- scikit-image==0.19.3 |
|
|
279 |
- scikit-learn==1.2.2 |
|
|
280 |
- scipy==1.10.1 |
|
|
281 |
- seaborn==0.11.2 |
|
|
282 |
- setuptools==67.6.1 |
|
|
283 |
- statsmodels==0.14.0 |
|
|
284 |
- text-unidecode==1.3 |
|
|
285 |
- threadpoolctl==3.1.0 |
|
|
286 |
- tifffile==2022.8.12 |
|
|
287 |
- torch-summary==1.4.5 |
|
|
288 |
- torchattacks==3.3.0 |
|
|
289 |
- torchinfo==1.7.2 |
|
|
290 |
- tqdm==4.65.0 |
|
|
291 |
- tzdata==2023.3 |
|
|
292 |
- umap-learn==0.5.3 |
|
|
293 |
- zipp==3.15.0 |