--- a +++ b/data/labels table.txt @@ -0,0 +1,44 @@ +List of the structures segmented by SynthSeg along with their corresponding label values. + +The structures are given in the same order as they appear in the posteriors, i.e. the first map of the posteriors +corresponds to the background, then the second map is associated to the left cerebral white matter, etc. + +Please note that the label values follow the FreeSurfer classification. Also, we do not provide any colour scheme, +as the colour displayed for each structure depends on the used image viewer. + +WARNING: if you use the --v1 flag, note that it won't segment the CSF (label 24), since this was introduced in version 2 + +labels structures +0 background +2 left cerebral white matter +3 left cerebral cortex +4 left lateral ventricle +5 left inferior lateral ventricle +7 left cerebellum white matter +8 left cerebellum cortex +10 left thalamus +11 left caudate +12 left putamen +13 left pallidum +14 3rd ventricle +15 4th ventricle +16 brain-stem +17 left hippocampus +18 left amygdala +26 left accumbens area +24 CSF +28 left ventral DC +41 right cerebral white matter +42 right cerebral cortex +43 right lateral ventricle +44 right inferior lateral ventricle +46 right cerebellum white matter +47 right cerebellum cortex +49 right thalamus +50 right caudate +51 right putamen +52 right pallidum +53 right hippocampus +54 right amygdala +58 right accumbens area +60 right ventral DC \ No newline at end of file