<!-- Generated by pkgdown: do not edit by hand -->
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1.0">
<title>DicomRDS Class — DicomRDS • RadETL</title>
<!-- jquery -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/jquery/3.3.1/jquery.min.js" integrity="sha256-FgpCb/KJQlLNfOu91ta32o/NMZxltwRo8QtmkMRdAu8=" crossorigin="anonymous"></script>
<!-- Bootstrap -->
<link href="https://cdnjs.cloudflare.com/ajax/libs/bootswatch/3.3.7/cerulean/bootstrap.min.css" rel="stylesheet" crossorigin="anonymous" />
<script src="https://cdnjs.cloudflare.com/ajax/libs/twitter-bootstrap/3.3.7/js/bootstrap.min.js" integrity="sha256-U5ZEeKfGNOja007MMD3YBI0A3OSZOQbeG6z2f2Y0hu8=" crossorigin="anonymous"></script>
<!-- Font Awesome icons -->
<link rel="stylesheet" href="https://cdnjs.cloudflare.com/ajax/libs/font-awesome/4.7.0/css/font-awesome.min.css" integrity="sha256-eZrrJcwDc/3uDhsdt61sL2oOBY362qM3lon1gyExkL0=" crossorigin="anonymous" />
<!-- clipboard.js -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/clipboard.js/2.0.4/clipboard.min.js" integrity="sha256-FiZwavyI2V6+EXO1U+xzLG3IKldpiTFf3153ea9zikQ=" crossorigin="anonymous"></script>
<!-- sticky kit -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/sticky-kit/1.1.3/sticky-kit.min.js" integrity="sha256-c4Rlo1ZozqTPE2RLuvbusY3+SU1pQaJC0TjuhygMipw=" crossorigin="anonymous"></script>
<!-- pkgdown -->
<link href="../pkgdown.css" rel="stylesheet">
<script src="../pkgdown.js"></script>
<meta property="og:title" content="DicomRDS Class — DicomRDS" />
<meta property="og:description" content="This class is a class that imports various metadata by reading an RDS file containing DICOM information.
There are basically functions that import data related to Radiology CDM." />
<meta name="twitter:card" content="summary" />
<!-- mathjax -->
<script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/MathJax.js" integrity="sha256-nvJJv9wWKEm88qvoQl9ekL2J+k/RWIsaSScxxlsrv8k=" crossorigin="anonymous"></script>
<script src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.5/config/TeX-AMS-MML_HTMLorMML.js" integrity="sha256-84DKXVJXs0/F8OTMzX4UR909+jtl4G7SPypPavF+GfA=" crossorigin="anonymous"></script>
<!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/html5shiv/3.7.3/html5shiv.min.js"></script>
<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
<![endif]-->
</head>
<body>
<div class="container template-reference-topic">
<header>
<div class="navbar navbar-default navbar-fixed-top" role="navigation">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar" aria-expanded="false">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<span class="navbar-brand">
<a class="navbar-link" href="../index.html">RadETL</a>
<span class="version label label-default" data-toggle="tooltip" data-placement="bottom" title="Released version">1.1</span>
</span>
</div>
<div id="navbar" class="navbar-collapse collapse">
<ul class="nav navbar-nav">
<li>
<a href="../index.html">
<span class="fa fa-home fa-lg"></span>
</a>
</li>
<li>
<a href="../reference/index.html">Reference</a>
</li>
</ul>
<ul class="nav navbar-nav navbar-right">
</ul>
</div><!--/.nav-collapse -->
</div><!--/.container -->
</div><!--/.navbar -->
</header>
<div class="row">
<div class="col-md-9 contents">
<div class="page-header">
<h1>DicomRDS Class</h1>
<div class="hidden name"><code>DicomRDS.Rd</code></div>
</div>
<div class="ref-description">
<p>This class is a class that imports various metadata by reading an RDS file containing DICOM information.
There are basically functions that import data related to Radiology CDM.</p>
</div>
<pre class="usage"><span class='no'>DicomRDS</span></pre>
<h2 class="hasAnchor" id="arguments"><a class="anchor" href="#arguments"></a>Arguments</h2>
<table class="ref-arguments">
<colgroup><col class="name" /><col class="desc" /></colgroup>
<tr>
<th>data</th>
<td><p>Data frame imported from DICOM RDS file</p></td>
</tr>
</table>
<h2 class="hasAnchor" id="format"><a class="anchor" href="#format"></a>Format</h2>
<p>An object of class <code>R6ClassGenerator</code> of length 24.</p>
<h2 class="hasAnchor" id="see-also"><a class="anchor" href="#see-also"></a>See also</h2>
<div class='dont-index'><p>https://github.com/OHDSI/Radiology-CDM/wiki</p></div>
<h2 class="hasAnchor" id="examples"><a class="anchor" href="#examples"></a>Examples</h2>
<pre class="examples"><span class='co'># NOT RUN {</span>
<span class='co'>############################# Example Code: Read DICOM RDS File ###################################</span>
<span class='no'>rdsFile</span> <span class='kw'><-</span> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/list.files'>list.files</a></span>(<span class='kw'>path</span> <span class='kw'>=</span> <span class='st'>"~/Radiology/rds_test"</span>, <span class='kw'>pattern</span> <span class='kw'>=</span> <span class='st'>"\\.rds$"</span>, <span class='kw'>full.names</span> <span class='kw'>=</span> <span class='no'>T</span>, <span class='kw'>recursive</span> <span class='kw'>=</span> <span class='no'>T</span>)
<span class='co'># If single data (only one metadata in dicom file )</span>
<span class='no'>dcmRDS</span> <span class='kw'><-</span> <span class='no'>DicomRDS</span>$<span class='fu'>new</span>(<span class='no'>data</span><span class='kw'>[[</span><span class='fl'>1</span>]])
<span class='co'># Create Occurrence ID for radiology image</span>
<span class='no'>roID</span> <span class='kw'><-</span> <span class='no'>dcmRDS</span>$<span class='fu'>createOccurrenceID</span>()
<span class='co'># Get PatientID</span>
<span class='no'>patientid</span> <span class='kw'><-</span> <span class='no'>dcmRDS</span>$<span class='fu'>getPatientID</span>()
<span class='no'>dcmRDS</span>$<span class='fu'>getDirectoryID</span>()
<span class='co'># This radiology contast or non-contrast</span>
<span class='no'>isContrast</span> <span class='kw'><-</span> <span class='no'>dcmRDS</span>$<span class='fu'>isPost4BrainCT</span>()
<span class='co'># If Multi data</span>
<span class='no'>data</span> <span class='kw'><-</span> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/readRDS'>readRDS</a></span>(<span class='kw'>file</span> <span class='kw'>=</span> <span class='no'>rdsFile</span>[<span class='fl'>5</span>])
<span class='kw'>for</span>(<span class='no'>i</span> <span class='kw'>in</span> <span class='fl'>1</span>:<span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/length'>length</a></span>(<span class='no'>data</span>)) {
<span class='no'>dcmRDS</span> <span class='kw'><-</span> <span class='no'>DicomRDS</span>$<span class='fu'>new</span>(<span class='no'>data</span><span class='kw'>[[</span><span class='no'>i</span>]])
<span class='no'>roID</span> <span class='kw'><-</span> <span class='no'>dcmRDS</span>$<span class='fu'>createOccurrenceID</span>()
<span class='no'>patientid</span> <span class='kw'><-</span> <span class='no'>dcmRDS</span>$<span class='fu'>getDirectoryID</span>()
<span class='no'>isContrast</span> <span class='kw'><-</span> <span class='no'>dcmRDS</span>$<span class='fu'>isPost4BrainCT</span>()
<span class='no'>df</span> <span class='kw'><-</span> <span class='fu'><a href='https://www.rdocumentation.org/packages/base/topics/data.frame'>data.frame</a></span>(<span class='no'>roID</span>, <span class='no'>patientid</span>, <span class='no'>isContrast</span>)
}
<span class='no'>df</span>
<span class='co'>######################################## Example Code: END ##########################################</span>
<span class='co'># }</span></pre>
</div>
<div class="col-md-3 hidden-xs hidden-sm" id="sidebar">
<h2>Contents</h2>
<ul class="nav nav-pills nav-stacked">
<li><a href="#arguments">Arguments</a></li>
<li><a href="#format">Format</a></li>
<li><a href="#see-also">See also</a></li>
<li><a href="#examples">Examples</a></li>
</ul>
<h2>Author</h2>
<p>Neon K.I.D</p>
</div>
</div>
<footer>
<div class="copyright">
<p>Developed by K.I.D Neon.</p>
</div>
<div class="pkgdown">
<p>Site built with <a href="https://pkgdown.r-lib.org/">pkgdown</a> 1.3.0.9000.</p>
</div>
</footer>
</div>
</body>
</html>