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b/RadETL/R/radiologyOccurrenceId_ImageTable.R |
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#' 'radiologyOccurrenceId' |
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#' |
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#' radiologyOccurrenceId function will read StudyInstanceUID metadata of all DICOM files read by DICOMHeaderList function |
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#' |
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#' @param DICOMList you can put it like this and then run the function : DICOMList<-DICOMHeaderList(DICOMFolderPath) |
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#' @import digest |
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#' @import dplyr |
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#' @importFrom magrittr "%>%" |
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#' |
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#' @return A list containing anonymized StudyInstanceUID of DICOM |
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#' @examples |
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#' DICOMList<-DICOMHeaderList(DICOMFolderPath) |
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#' radiologyOccurrenceId(DICOMList) |
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#' @export |
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radiologyOccurrenceId<-function(DICOMList){ |
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radiologyOccurrenceId<-lapply(DICOMList, function(x){ |
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radiologyOccurrenceId<-as.character(data.frame(x[[1]] %>% dplyr::filter(name=='StudyInstanceUID') %>% dplyr::select(value))[c(1),]) |
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if(radiologyOccurrenceId=="character(0)" | radiologyOccurrenceId=="" | radiologyOccurrenceId=="integer(0)" | is.na(radiologyOccurrenceId)==T){ |
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radiologyOccurrenceId='NA' |
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} |
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return(radiologyOccurrenceId)}) |
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radiologyOccurrenceId<-as.data.frame(do.call(rbind, radiologyOccurrenceId)) |
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colnames(radiologyOccurrenceId)<-'radiologyOccurrenceId' |
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return(radiologyOccurrenceId)} |