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b/RadETL/R/modalityImage.R |
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#' 'modalityImage' |
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#' |
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#' modalityImage function indicates modality of each image |
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#' |
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#' |
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#' @param DICOMList you can put it like this and then run the function : DICOMList<-DICOMHeaderList(DICOMFolderPath) |
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#' @import dplyr |
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#' @importFrom magrittr "%>%" |
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#' |
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#' |
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#' @return A dataframe indicating modality of each image |
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#' @examples |
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#' DICOMList<-DICOMHeaderList(DICOMFolderPath) |
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#' modalityImage(DICOMList) |
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#' @export |
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#modalityImage |
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modalityImage<-function(DICOMList){ |
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modalityImage<-lapply(DICOMList, function(x){ |
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modalityImage<-as.character(x[[1]] %>% filter(name=='Modality') %>% select(value)) |
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if(modalityImage=="CR" | modalityImage=="DX"){ |
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modalityImage='XR' |
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} |
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else if(modalityImage=="character(0)" | modalityImage=="" | modalityImage=="integer(0)"){ |
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modalityImage='NA' |
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} |
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return(modalityImage)}) |
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modalityImage<-as.data.frame(do.call(rbind, modalityImage)) |
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colnames(modalityImage)<-'modality' |
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return(modalityImage) |
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} |