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b/local_config.py |
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PATH_TO_MIMIC_CXR = "<PATH_TO_MIMIC_CXR>" #TODO set your own path to MIMIC-CXR-JPG dataset (should point to a folder containing "mimic-cxr-jpg" folder) |
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PATH_TO_MIMIC_NLE = "<PATH_TO_MIMIC_NLE>" #TODO set your own path to MIMIC-NLE dataset (should point to a folder containing "mimic-nle" folder) |
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VIS_ROOT = f"{PATH_TO_MIMIC_CXR}/mimic-cxr-jpg/2.0.0" |
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JAVA_HOME = "<PATH_TO_JAVA>/java/jre1.8.0_361" #TODO set your own path to java home, adapt version if necessary |
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JAVA_PATH = "PATH_TO_JAVA/java/jre1.8.0_361/bin:" |
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CHEXBERT_ENV_PATH = '<PATH_TO_ENVS>/miniconda3/envs/chexbert/bin/python' #replace with path to chexbert environment |
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CHEXBERT_PATH = '<PATH_TO_PROJECT>/RaDialog/chexbert/src' #replace with path to chexbert project in RaDialog folder |
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WANDB_ENTITY = " " #TODO set your own wandb entity |