import torch

import pandas as pd

import numpy as np

from bert_tokenizer import load_list

from torch.utils.data import Dataset, DataLoader

class ImpressionsDataset(Dataset):

        """The dataset to contain report impressions and their labels."""

        def __init__(self, csv_path, list_path):

                """ Initialize the dataset object

                @param csv_path (string): path to the csv file containing labels

                @param list_path (string): path to the list of encoded impressions

                """

                self.df = pd.read_csv(csv_path)

                self.df =  self.df[['Enlarged Cardiomediastinum', 'Cardiomegaly', 'Lung Opacity',

                                    'Lung Lesion', 'Edema', 'Consolidation', 'Pneumonia', 'Atelectasis',

                                    'Pneumothorax', 'Pleural Effusion', 'Pleural Other', 'Fracture',

                                    'Support Devices', 'No Finding']]

                self.df.replace(0, 2, inplace=True) #negative label is 2

                self.df.replace(-1, 3, inplace=True) #uncertain label is 3

                self.df.fillna(0, inplace=True) #blank label is 0

                self.encoded_imp = load_list(path=list_path)

        def __len__(self):

                """Compute the length of the dataset

                @return (int): size of the dataframe

                """

                return self.df.shape[0]

        def __getitem__(self, idx):

                """ Functionality to index into the dataset

                @param idx (int): Integer index into the dataset

                @return (dictionary): Has keys 'imp', 'label' and 'len'. The value of 'imp' is

                                      a LongTensor of an encoded impression. The value of 'label'

                                      is a LongTensor containing the labels and 'the value of

                                      'len' is an integer representing the length of imp's value

                """

                if torch.is_tensor(idx):

                        idx = idx.tolist()

                label = self.df.iloc[idx].to_numpy()

                label = torch.LongTensor(label)

                imp = self.encoded_imp[idx]

                imp = torch.LongTensor(imp)

                return {"imp": imp, "label": label, "len": imp.shape[0]}