Diff of /inference_URPC.py [000000] .. [903821]

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+++ b/inference_URPC.py
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+import os
+import argparse
+import torch
+from networks.unet_urpc import unet_3D_dv_semi
+from utils.test_patch import test_all_case
+
+parser = argparse.ArgumentParser()
+parser.add_argument('--dataset_name', type=str,  default='LA', help='dataset_name')
+parser.add_argument('--root_path', type=str, default='/***/data_set/LASet/data/', help='Name of Experiment')
+parser.add_argument('--exp', type=str,  default='vnet', help='exp_name')
+parser.add_argument('--model', type=str,  default='URPC', help='model_name')
+parser.add_argument('--gpu', type=str,  default='0', help='GPU to use')
+parser.add_argument('--detail', type=int,  default=1, help='print metrics for every samples?')
+parser.add_argument('--labelnum', type=int, default=25, help='labeled data')
+parser.add_argument('--nms', type=int, default=0, help='apply NMS post-procssing?')
+
+FLAGS = parser.parse_args()
+os.environ['CUDA_VISIBLE_DEVICES'] = FLAGS.gpu
+test_save_path = 'predictions/URPC/'
+
+num_classes = 2
+patch_size = (112, 112, 80)
+FLAGS.root_path = FLAGS.root_path
+with open(FLAGS.root_path + '/../test.list', 'r') as f:
+    image_list = f.readlines()
+image_list = [FLAGS.root_path + item.replace('\n', '') + "/mri_norm2.h5" for item in image_list]
+
+if not os.path.exists(test_save_path):
+    os.makedirs(test_save_path)
+print(test_save_path)
+
+def test_calculate_metric():
+    net = unet_3D_dv_semi(n_classes=num_classes, in_channels=1).cuda()
+    save_mode_path = 'model/LA_vnet_25_labeled/URPC/URPC_best_model.pth'
+    net.load_state_dict(torch.load(save_mode_path), strict=False)  # False
+    print("init weight from {}".format(save_mode_path))
+    net.eval()
+
+    avg_metric = test_all_case(FLAGS.model, 1, net, image_list, num_classes=num_classes,
+                    patch_size=(112, 112, 80), stride_xy=18, stride_z=4,
+                    save_result=False, test_save_path=test_save_path,
+                    metric_detail=FLAGS.detail, nms=FLAGS.nms)
+
+    return avg_metric
+
+
+if __name__ == '__main__':
+    metric = test_calculate_metric()
+    print(metric)