Hippocampus_Segmentation / Git / Commit [9f71e2]

Samuel Callahan

Hippocampus_Segmentation

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Commit [9f71e2] main

Initial commit

Authored by: SCallahan 2025-04-20

Browse code at this revision

Parent: [421a5e]

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added	.gitignore
added	LICENSE.md
added	README.md
added	Section 1 EDA/.student_bashrc
added	Section 1 EDA/Final Project EDA.ipynb
added	Section 1 EDA/out/Final Project EDA.ipynb
added	Section 1 EDA/out/README.md
added	Section 1 EDA/out/imagesPLACEHOLDER.txt
added	Section 1 EDA/out/labelsPLACEHOLDER.txt
added	Section 2 Train_Eval_Model/.student_bashrc
added	Section 2 Train_Eval_Model/TestVolumesPLACEHOLDER.txt
added	Section 2 Train_Eval_Model/TrainingSetPLACEHOLDER.txt
added	Section 2 Train_Eval_Model/out/2020-09-08_2231_Basic_unet/modelPLACEHOLDER.txt
added	Section 2 Train_Eval_Model/out/2020-09-08_2231_Basic_unet/results.json
added	Section 2 Train_Eval_Model/src/data_prep/HippocampusDatasetLoader.py
added	Section 2 Train_Eval_Model/src/data_prep/SlicesDataset.py
added	Section 2 Train_Eval_Model/src/environment.yml
added	Section 2 Train_Eval_Model/src/experiments/UNetExperiment.py
added	Section 2 Train_Eval_Model/src/inference/UNetInferenceAgent.py
added	Section 2 Train_Eval_Model/src/inference/__init__.py
added	Section 2 Train_Eval_Model/src/networks/RecursiveUNet.py
added	Section 2 Train_Eval_Model/src/networks/__init__.py
added	Section 2 Train_Eval_Model/src/run_ml_pipeline.py
added	Section 2 Train_Eval_Model/src/runs/Sep08_22-31-40_af16c308771d_train/events.out.tfevents.1599604300.af16c308771d.1551.0
added	Section 2 Train_Eval_Model/src/runs/Sep08_22-31-40_af16c308771d_val/events.out.tfevents.1599604300.af16c308771d.1551.1

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LICENSE.md Diff Switch to side-by-side view

README.md Diff Switch to side-by-side view

Section 1 EDA/.student_bashrc Diff Switch to side-by-side view

Section 1 EDA/Final Project EDA.ipynb Diff Switch to side-by-side view

Section 1 EDA/out/Final Project EDA.ipynb Diff Switch to side-by-side view

Section 1 EDA/out/README.md Diff Switch to side-by-side view

Section 1 EDA/out/imagesPLACEHOLDER.txt Diff Switch to side-by-side view

Section 1 EDA/out/labelsPLACEHOLDER.txt Diff Switch to side-by-side view

Section 2 Train_Eval_Model/.student_bashrc Diff Switch to side-by-side view

Section 2 Train_Eval_Model/TestVolumesPLACEHOLDER.txt Diff Switch to side-by-side view

Section 2 Train_Eval_Model/TrainingSetPLACEHOLDER.txt Diff Switch to side-by-side view

Section 2 Train_Eval_Model/out/2020-09-08_2231_Basic_unet/modelPLACEHOLDER.txt Diff Switch to side-by-side view

Section 2 Train_Eval_Model/out/2020-09-08_2231_Basic_unet/results.json Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/data_prep/HippocampusDatasetLoader.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/data_prep/SlicesDataset.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/environment.yml Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/experiments/UNetExperiment.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/inference/UNetInferenceAgent.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/inference/init.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/networks/RecursiveUNet.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/networks/init.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/run_ml_pipeline.py Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/runs/Sep08_22-31-40_af16c308771d_train/events.out.tfevents.1599604300.af16c308771d.1551.0 Diff Switch to side-by-side view

Section 2 Train_Eval_Model/src/runs/Sep08_22-31-40_af16c308771d_val/events.out.tfevents.1599604300.af16c308771d.1551.1 Diff Switch to side-by-side view

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