Dataset Directory

This directory contains original input, and output of every step would also appear here.

Dataset

In this repo, the dataset is downloaded from LONI Image Data Archive (IDA).
Collect and download AD and NC screening sample of ADNI1 and ADNI2, and extract them into this folder.
Thus, there would be four sub-directories in this floder as shown below:

• ADNI1_Screening_AD
• ADNI1_Screening_NC
• ADNI2_Screening_AD
• ADNI2_Screening_NC

Template

Create a folder names "Template", copy the template volume from the path:

$FSLDIR/data/standard/MNI152_T1_1mm.nii.gz

In which, $FSLDIR is the directory where FSL is installed in.