[ab8281]: / brats_toolkit / config / dockers.json

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{
"econib":{
"name":"econib",
"author":"Michal Marcinkiewicz",
"fileformat":"gz-b17",
"runtime":"runc",
"id":"econib/brats-2018",
"command":" ",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-11726-9_2"
},
"mic-dkfz":{
"name":"mic-dkfz",
"author":"Fabian Isensee",
"fileformat":"gz-b17-f",
"runtime":"nvidia",
"id":"fabianisensee/isen2018",
"command":"python3.6 predict_patient.py",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-11726-9_21"
},
"scan":{
"name":"scan",
"author":"Richard McKinley",
"fileformat":"b17-t1",
"runtime":"nvidia",
"id":"mckinleyscan/brats:v1",
"command":"python DeepSCAN_BRATS.py",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-11726-9_40"
},
"xfeng":{
"name":"xfeng",
"author":"Xue Feng",
"fileformat":"gz-b17-f",
"runtime":"nvidia",
"id":"xf4j/brats18",
"command":"python /brats18/docker_run_survival.py",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-11726-9_25"
},
"lfb_rwth":{
"name":"lfb_rwth",
"author":"Leon Weninger",
"fileformat":"gz-b17-t1",
"runtime":"runc",
"id":"leonweninger/brats18_segmentation",
"command":" ",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-11726-9_1"
},
"gbmnet":{
"name":"gbmnet",
"author":"Nicholas Nuechterlein",
"fileformat":"gz-b17-t1",
"runtime":"runc",
"id":"nknuecht/gbmnet18",
"command":"python evaluate.py",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-11726-9_22"
},
"zyx_2019":{
"name":"zyx_2019",
"author":"yuanxing.zhao@nlpr.ia.ac.cn",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"jiaocha/zyxbrats",
"command":" ",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-32248-9_29"
},
"scan_2019":{
"name":"scan_2019",
"author":"Richard McKinley - richard.mckinley@gmail.com",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"scan/brats2019",
"command":"python DeepSCAN_BRATS_2019.py",
"mountpoint":"/data",
"citation": "https://link.springer.com/chapter/10.1007/978-3-030-46640-4_36"
},
"isen-20":{
"name":"iisen-20",
"author":"Fabian Isensee",
"email": "f.isensee@dkfz-heidelberg.de",
"citation": "TODO",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"brats/isen-20",
"command":"python runner.py",
"mountpoint":"/app/data/",
"user_mode": true,
"root_issue": false,
"flags": ""
},
"hnfnetv1-20":{
"name":"hnfnetv1-20",
"author":"Jia Haozhe",
"email": "HAJ39@pitt.edu",
"citation": "TODO",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"brats/hnfnetv1-20",
"command":"",
"mountpoint":"/app/data/",
"user_mode": true,
"root_issue": false,
"flags": ""
},
"yixinmpl-20":{
"name":"yixinmpl-20",
"author":"Yixin Wang",
"email": "wangyixin19@mails.ucas.ac.scan2020cn",
"citation": "TODO",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"brats/yixinmpl-20",
"command":"python run.py",
"mountpoint":"/workspace/data/",
"user_mode": false,
"root_issue": true,
"result_creation": false,
"flags": ""
},
"sanet0-20":{
"name":"sanet0-20",
"author":"Yading Yuan",
"email": "yading.yuan@mountsinai.org",
"citation": "TODO",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"brats/sanet0-20",
"command":"",
"mountpoint":"/app/data/",
"user_mode": true,
"root_issue": false,
"flags": "--shm-size=\"128G\""
},
"scan_lite-20":{
"name":"scan_lite-20",
"author":"Richard McKinley",
"email": "richard.mckinley@gmail.com",
"citation": "TODO",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"brats/scan-20",
"command":"python3 DeepSCAN_BRATS_2020.py -l",
"mountpoint":"/app/data/",
"user_mode": true,
"root_issue": false,
"flags": ""
},
"scan-20":{
"name":"scan2020",
"author":"Richard McKinley",
"email": "richard.mckinley@gmail.com",
"citation": "TODO",
"fileformat":"gz-b18",
"runtime":"nvidia",
"id":"brats/scan-20",
"command":"python3 DeepSCAN_BRATS_2020.py",
"mountpoint":"/app/data/",
"user_mode": true,
"root_issue": false,
"flags": ""
}
}