[5d12a0]: / src / weingartenImageCurvature.cxx

Download this file

71 lines (58 with data), 2.0 kB

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
#include <nanobind/nanobind.h>
#include <nanobind/stl/vector.h>
#include <nanobind/stl/string.h>
#include <nanobind/stl/tuple.h>
#include <nanobind/stl/list.h>
#include <nanobind/ndarray.h>
#include <nanobind/stl/shared_ptr.h>
#include <exception>
#include <vector>
#include <string>
#include <algorithm>
#include "itkImage.h"
#include "antscore/itkSurfaceImageCurvature.h"
#include "antsImage.h"
namespace nb = nanobind;
using namespace nb::literals;
AntsImage<itk::Image<float, 3>> weingartenImageCurvature( AntsImage<itk::Image<float, 3>> myimage,
float sigma, int opt )
{
typedef itk::Image<float, 3> ImageType;
typedef typename ImageType::Pointer ImagePointerType;
enum { ImageDimension = ImageType::ImageDimension };
typedef itk::SurfaceImageCurvature<ImageType> ParamType;
typename ParamType::Pointer Parameterizer = ParamType::New();
typename ImageType::Pointer input = myimage.ptr;
typename ImageType::DirectionType imgdir = input->GetDirection();
typename ImageType::DirectionType iddir = input->GetDirection();
iddir.SetIdentity();
input->SetDirection( iddir );
Parameterizer->SetInputImage(input);
Parameterizer->SetNeighborhoodRadius( 1. );
if( sigma <= 0.5 )
{
sigma = 1.66;
}
Parameterizer->SetSigma(sigma);
Parameterizer->SetUseLabel(false);
Parameterizer->SetUseGeodesicNeighborhood(false);
float sign = 1.0;
Parameterizer->SetkSign(sign);
Parameterizer->SetThreshold(0);
if( opt != 5 && opt != 6 )
{
Parameterizer->ComputeFrameOverDomain( 3 );
}
else
{
Parameterizer->ComputeFrameOverDomain( opt );
}
typename ImageType::Pointer output = Parameterizer->GetFunctionImage();
output->SetDirection( imgdir );
AntsImage<ImageType> outImage = { output };
return outImage;
}
void local_weingartenImageCurvature(nb::module_ &m)
{
m.def("weingartenImageCurvature", &weingartenImageCurvature);
}