|
a |
|
b/src/padImage.cxx |
|
|
1 |
|
|
|
2 |
#include <nanobind/nanobind.h> |
|
|
3 |
#include <nanobind/stl/vector.h> |
|
|
4 |
#include <nanobind/stl/string.h> |
|
|
5 |
#include <nanobind/stl/tuple.h> |
|
|
6 |
#include <nanobind/ndarray.h> |
|
|
7 |
|
|
|
8 |
#include <exception> |
|
|
9 |
#include <vector> |
|
|
10 |
#include <string> |
|
|
11 |
|
|
|
12 |
#include "itkImage.h" |
|
|
13 |
#include "itkConstantPadImageFilter.h" |
|
|
14 |
|
|
|
15 |
#include "antsImage.h" |
|
|
16 |
|
|
|
17 |
namespace nb = nanobind; |
|
|
18 |
using namespace nb::literals; |
|
|
19 |
|
|
|
20 |
template < typename ImageType > |
|
|
21 |
AntsImage<ImageType> padImage( AntsImage<ImageType> & antsImage, |
|
|
22 |
std::vector<int> lowerPadDims, |
|
|
23 |
std::vector<int> upperPadDims, |
|
|
24 |
float padValue ) |
|
|
25 |
{ |
|
|
26 |
typedef typename ImageType::Pointer ImagePointerType; |
|
|
27 |
typename ImageType::Pointer itkImage = antsImage.ptr; |
|
|
28 |
|
|
|
29 |
|
|
|
30 |
typename ImageType::SizeType lowerExtendRegion; |
|
|
31 |
lowerExtendRegion[0] = lowerPadDims[0]; |
|
|
32 |
lowerExtendRegion[1] = lowerPadDims[1]; |
|
|
33 |
if (lowerPadDims.size() == 3) |
|
|
34 |
{ |
|
|
35 |
lowerExtendRegion[2] = lowerPadDims[2]; |
|
|
36 |
} |
|
|
37 |
|
|
|
38 |
typename ImageType::SizeType upperExtendRegion; |
|
|
39 |
upperExtendRegion[0] = upperPadDims[0]; |
|
|
40 |
upperExtendRegion[1] = upperPadDims[1]; |
|
|
41 |
if (upperPadDims.size() == 3) |
|
|
42 |
{ |
|
|
43 |
upperExtendRegion[2] = upperPadDims[2]; |
|
|
44 |
} |
|
|
45 |
|
|
|
46 |
//ImageType::PixelType constantPixel = padValue; |
|
|
47 |
typedef itk::ConstantPadImageFilter<ImageType, ImageType> PadImageFilterType; |
|
|
48 |
typename PadImageFilterType::Pointer padFilter = PadImageFilterType::New(); |
|
|
49 |
padFilter->SetInput( itkImage ); |
|
|
50 |
padFilter->SetPadLowerBound( lowerExtendRegion ); |
|
|
51 |
padFilter->SetPadUpperBound( upperExtendRegion ); |
|
|
52 |
padFilter->SetConstant( padValue ); |
|
|
53 |
padFilter->Update(); |
|
|
54 |
FixNonZeroIndex<ImageType>( padFilter->GetOutput() ); |
|
|
55 |
|
|
|
56 |
AntsImage<ImageType> myImage = { padFilter->GetOutput() }; |
|
|
57 |
return myImage; |
|
|
58 |
} |
|
|
59 |
|
|
|
60 |
void local_padImage(nb::module_ &m) |
|
|
61 |
{ |
|
|
62 |
m.def("padImage", &padImage<itk::Image<float, 2>>); |
|
|
63 |
m.def("padImage", &padImage<itk::Image<float, 3>>); |
|
|
64 |
m.def("padImage", &padImage<itk::Image<float, 4>>); |
|
|
65 |
} |
|
|
66 |
|