--- a
+++ b/3D Reconstruction/3D Visualization/Dual Marching Cubes/include/dualmc.h
@@ -0,0 +1,245 @@
+#ifndef DUALMC_H_INCLUDED
+#define DUALMC_H_INCLUDED
+
+/// \file   dualmc.h
+/// \author Dominik Wodniok
+/// \date   2009
+
+// c includes
+#include <cstdint>
+
+// stl includes
+#include <unordered_map>
+#include <vector>
+
+namespace dualmc {
+    
+
+typedef float VertexComponentsType;
+typedef int32_t QuadIndexType;
+
+/// vertex structure for dual points
+struct Vertex {
+    /// non-initializing constructor
+    Vertex();
+
+    /// initializing constructor
+    Vertex(VertexComponentsType x, VertexComponentsType y, VertexComponentsType z);
+    
+    /// initializing constructor
+    Vertex(Vertex const & v);
+    
+    // components
+    VertexComponentsType x,y,z;
+};
+
+/// quad indices structure
+struct Quad {
+    /// non-initializing constructor
+    Quad();
+    
+    /// initializing constructor
+    Quad(QuadIndexType i0, QuadIndexType i1,QuadIndexType i2, QuadIndexType i3);
+    
+    // quad indices
+    QuadIndexType i0,i1,i2,i3;
+    
+};
+
+/// \class  DualMC
+/// \author Dominik Wodniok
+/// \date   2009
+/// Class which implements the dual marching cubes algorithm from Gregory M. Nielson.
+/// Faces and vertices of the standard marching cubes algorithm correspond to
+/// vertices and faces in the dual algorithm. As a vertex in standard marching cubes
+/// usually is shared by 4 faces, the dual mesh is entirely made from quadrangles.
+/// Unfortunately, under rare circumstances the original algorithm can create
+/// non-manifold meshes. See the remarks of the original paper on this.
+/// The class optionally can guarantee manifold meshes by taking the Manifold
+/// Dual Marching Cubes approach from Rephael Wenger as described in
+/// chapter 3.3.5 of his book "Isosurfaces: Geometry, Topology, and Algorithms".
+template<class T> class DualMC {
+public:
+    // typedefs
+    typedef T VolumeDataType;
+
+    /// Extracts the iso surface for a given volume and iso value.
+    /// Output is a list of vertices and a list of indices, which connect
+    /// vertices to quads.
+    /// The quad mesh either uses shared vertex indices or is a quad soup if
+    /// desired.
+    void build(
+        VolumeDataType const * data,
+        int32_t const dimX, int32_t const dimY, int32_t const dimZ,
+        VolumeDataType const iso,
+        bool const generateManifold,
+        bool const generateSoup,
+        std::vector<Vertex> & vertices,
+        std::vector<Quad> & quads
+        );
+
+private:
+
+    /// Extract quad mesh with shared vertex indices.
+    void buildSharedVerticesQuads(
+        VolumeDataType const iso,
+        std::vector<Vertex> & vertices,
+        std::vector<Quad> & quads
+        );
+        
+    /// Extract quad soup.
+    void buildQuadSoup(
+        VolumeDataType const iso,
+        std::vector<Vertex> & vertices,
+        std::vector<Quad> & quads
+        );
+
+
+private:
+
+    /// enum with edge codes for a 12-bit voxel edge mask to indicate
+    /// grid edges which intersect the ISO surface of classic marching cubes
+    enum DMCEdgeCode {
+        EDGE0 = 1,
+        EDGE1 = 1 << 1,
+        EDGE2 = 1 << 2,
+        EDGE3 = 1 << 3,
+        EDGE4 = 1 << 4,
+        EDGE5 = 1 << 5,
+        EDGE6 = 1 << 6,
+        EDGE7 = 1 << 7,
+        EDGE8 = 1 << 8,
+        EDGE9 = 1 << 9,
+        EDGE10 = 1 << 10,
+        EDGE11 = 1 << 11,
+        FORCE_32BIT = 0xffffffff
+    };
+
+    /// get the 8-bit in-out mask for the voxel corners of the cell cube at (cx,cy,cz)
+    /// and the given iso value
+    int getCellCode(int32_t const cx, int32_t const cy, int32_t const cz, VolumeDataType const iso) const;
+
+    /// Get the 12-bit dual point code mask, which encodes the traditional
+    /// marching cube vertices of the traditional marching cubes face which
+    /// corresponds to the dual point.
+    /// This is also where the manifold dual marching cubes algorithm is
+    /// implemented.
+    int getDualPointCode(int32_t const cx, int32_t const cy, int32_t const cz,
+      VolumeDataType const iso, DMCEdgeCode const edge) const;
+
+    /// Given a dual point code and iso value, compute the dual point.
+    void calculateDualPoint(int32_t const cx, int32_t const cy, int32_t const cz,
+      VolumeDataType const iso, int const pointCode, Vertex &v) const;
+
+    /// Get the shared index of a dual point which is uniquly identified by its
+    /// cell cube index and a cube edge. The dual point is computed,
+    /// if it has not been computed before.
+    QuadIndexType getSharedDualPointIndex(int32_t const cx, int32_t const cy, int32_t const cz,
+      VolumeDataType const iso, DMCEdgeCode const edge,
+      std::vector<Vertex> & vertices);
+    
+    /// Compute a linearized cell cube index.
+    int32_t gA(int32_t const x, int32_t const y, int32_t const z) const;
+
+private:
+    // static lookup tables needed for (manifold) dual marching cubes
+
+    /// Dual Marching Cubes table
+    /// Encodes the edge vertices for the 256 marching cubes cases.
+    /// A marching cube case produces up to four faces and ,thus, up to four
+    /// dual points.
+    static int32_t const dualPointsList[256][4];
+    
+    /// Table which encodes the ambiguous face of cube configurations, which
+    /// can cause non-manifold meshes.
+    /// Needed for manifold dual marching cubes.
+    static uint8_t const problematicConfigs[256];
+    
+private:
+
+    /// convenience volume extent array for x-,y-, and z-dimension
+    int32_t dims[3];
+
+    /// convenience volume data point
+    VolumeDataType const * data;
+    
+    /// store whether the manifold dual marching cubes algorithm should be
+    /// applied.
+    bool generateManifold;
+    
+    /// Dual point key structure for hashing of shared vertices
+    struct DualPointKey {
+        // a dual point can be uniquely identified by ite linearized volume cell
+        // id and point code
+        int32_t linearizedCellID;
+        int pointCode;
+        /// Equal operator for unordered map
+        bool operator==(DualPointKey const & other) const;
+    };
+    
+    /// Functor for dual point key hash generation
+    struct DualPointKeyHash {
+        size_t operator()(DualPointKey const & k) const {
+            return size_t(k.linearizedCellID) | (size_t(k.pointCode) << 32u);
+        }
+    };
+    
+    /// Hash map for shared vertex index computations
+    std::unordered_map<DualPointKey,QuadIndexType,DualPointKeyHash> pointToIndex;
+};
+
+// inline function definitions
+
+//------------------------------------------------------------------------------
+
+inline
+Vertex::Vertex(){}
+
+//------------------------------------------------------------------------------
+
+inline
+Vertex::Vertex(
+    VertexComponentsType x,
+    VertexComponentsType y,
+    VertexComponentsType z
+    ) : x(x), y(y), z(z) {}
+
+//------------------------------------------------------------------------------
+
+inline
+Vertex::Vertex(Vertex const & v) : x(v.x), y(v.y), z(v.z) {}
+
+//------------------------------------------------------------------------------
+
+inline
+Quad::Quad(){}
+
+//------------------------------------------------------------------------------
+
+inline
+Quad::Quad(
+    QuadIndexType i0,
+    QuadIndexType i1,
+    QuadIndexType i2,
+    QuadIndexType i3
+    ) : i0(i0),i1(i1),i2(i2),i3(i3) {}
+
+//------------------------------------------------------------------------------
+
+template<class T> inline
+int32_t DualMC<T>::gA(int32_t const x, int32_t const y, int32_t const z) const {
+    return x + dims[0] * (y + dims[1] * z);
+}
+
+//------------------------------------------------------------------------------
+template<class T> inline
+bool DualMC<T>::DualPointKey::operator==(typename DualMC<T>::DualPointKey const & other) const {
+    return linearizedCellID == other.linearizedCellID && pointCode == other.pointCode;
+}
+
+#include "dualmc.tpp"
+
+#include "dualmc_tables.tpp"
+
+} // END: namespace dualmc
+#endif // DUALMC_H_INCLUDED