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| a | b/results/2018-04-20_rand44659_allOn | ||
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| 1 | Your job 653216 ("-2018-04-20_rand44659_allOn") has been submitted |
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| 2 | |||
| 3 | |||
| 4 | @ @ @ @ @ @ START @ @ @ @ @ @ @ |
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| 5 | file: script_start.lua |
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| 6 | author Davide Chicco <davide.chicco@gmail.com> |
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| 7 | Fri Apr 20 14:41:42 2018 |
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| 8 | Readin' ../data/LungCancerDataset_AllRecords_NORM.csv |
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| 9 | |||
| 10 | OPTIM_PACKAGE = true |
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| 11 | XAVIER_INITIALIZATION = true |
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| 12 | DROPOUT_FLAG = true |
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| 13 | MOMENTUM_ALPHA = 0.5 |
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| 14 | MOMENTUM = true |
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| 15 | LEARN_RATE = 0.01 |
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| 16 | ITERATIONS = 200 |
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| 17 | Number of value profiles (rows) = 10443 |
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| 18 | Number features (columns) = 27 |
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| 19 | Number of targets (rows) = 10443 |
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| 20 | #patients_vett = 10443 |
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| 21 | |||
| 22 | training_set_size = 6266 |
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| 23 | validation_set_size = 2089 |
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| 24 | test_set_size = 2088 |
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| 25 | |||
| 26 | $$$ hidden_units = 5 hidden_layers = 1 $$$ |
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| 27 | XAVIER_INITIALIZATION = true |
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| 28 | completion: 4% (epoch=8)(element=6266) loss = 0.061 error progress = 4.55658% |
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| 29 | completion: 8% (epoch=16)(element=6266) loss = 0.013 error progress = 4.41918% |
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| 30 | completion: 12% (epoch=24)(element=6266) loss = 0.017 error progress = 4.34502% |
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| 31 | completion: 16% (epoch=32)(element=6266) loss = 0.069 error progress = 4.30251% |
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| 32 | completion: 20% (epoch=40)(element=6266) loss = 0.089 error progress = 4.26746% |
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| 33 | completion: 24% (epoch=48)(element=6266) loss = 0.021 error progress = 4.24555% |
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| 34 | completion: 28% (epoch=56)(element=6266) loss = 0.021 error progress = 4.20687% |
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| 35 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 4.17653% |
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| 36 | completion: 36% (epoch=72)(element=6266) loss = 0.015 error progress = 4.15431% |
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| 37 | completion: 40% (epoch=80)(element=6266) loss = 0.007 error progress = 4.13531% |
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| 38 | completion: 44% (epoch=88)(element=6266) loss = 0.11 error progress = 4.11896% |
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| 39 | completion: 48% (epoch=96)(element=6266) loss = 0.072 error progress = 4.10641% |
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| 40 | completion: 52% (epoch=104)(element=6266) loss = 0.137 error progress = 4.09504% |
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| 41 | completion: 56% (epoch=112)(element=6266) loss = 0.008 error progress = 4.08599% |
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| 42 | completion: 60% (epoch=120)(element=6266) loss = 0.003 error progress = 4.07886% |
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| 43 | completion: 64% (epoch=128)(element=6266) loss = 0.017 error progress = 4.07001% |
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| 44 | completion: 68% (epoch=136)(element=6266) loss = 0.102 error progress = 4.06377% |
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| 45 | completion: 72% (epoch=144)(element=6266) loss = 0.006 error progress = 4.0581% |
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| 46 | completion: 76% (epoch=152)(element=6266) loss = 0.054 error progress = 4.05139% |
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| 47 | completion: 80% (epoch=160)(element=6266) loss = 0.011 error progress = 4.04811% |
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| 48 | completion: 84% (epoch=168)(element=6266) loss = 0.063 error progress = 4.04407% |
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| 49 | completion: 88% (epoch=176)(element=6266) loss = 0.046 error progress = 4.04064% |
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| 50 | completion: 92% (epoch=184)(element=6266) loss = 0.024 error progress = 4.03767% |
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| 51 | completion: 96% (epoch=192)(element=6266) loss = 0.092 error progress = 4.03396% |
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| 52 | completion: 100% (epoch=200)(element=6266) loss = 0.052 error progress = 4.03089% |
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| 53 | |||
| 54 | |||
| 55 | ### executeTest(perceptron, validation_patient_profile) |
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| 56 | |||
| 57 | Correct predictions = 77.5% |
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| 58 | #FPplusFN=2089 |
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| 59 | minError=442 minErrorIndex=1 globalThreshold =-1.4786793598946 |
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| 60 | metrics area_roc = 77.03% |
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| 61 | (beta) metrics area_precision_recall = 43.67% |
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| 62 | |||
| 63 | duration the new area_roc metrics ROC_AUC_computer function: 1 seconds |
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| 64 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 01 seconds |
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| 65 | TOTAL: |
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| 66 | FN = 459 / 516 (truth == 1) & (prediction < threshold) |
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| 67 | TP = 57 / 516 (truth == 1) & (prediction >= threshold) |
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| 68 | |||
| 69 | FP = 11 / 1,573 (truth == 0) & (prediction >= threshold) |
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| 70 | TN = 1,562 / 1,573 (truth == 0) & (prediction < threshold) |
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| 71 | |||
| 72 | |||
| 73 | :::: Matthews correlation coefficient = +0.25 :::: |
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| 74 | |||
| 75 | accuracy = 0.78 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
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| 76 | recall = 0.11 = tp / (tp + fn) [worst = 0, best = 1] |
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| 77 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
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| 78 | f1_score = 0.2 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
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| 79 | Saved model file: ./models/model_hus5_hl1_time1524249852 |
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| 80 | |||
| 81 | $$$ hidden_units = 10 hidden_layers = 1 $$$ |
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| 82 | XAVIER_INITIALIZATION = true |
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| 83 | completion: 4% (epoch=8)(element=6266) loss = 0.04 error progress = 3.92664% |
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| 84 | completion: 8% (epoch=16)(element=6266) loss = 0.041 error progress = 3.76344% |
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| 85 | completion: 12% (epoch=24)(element=6266) loss = 0.012 error progress = 3.65179% |
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| 86 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 3.56861% |
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| 87 | completion: 20% (epoch=40)(element=6266) loss = 0.094 error progress = 3.49602% |
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| 88 | completion: 24% (epoch=48)(element=6266) loss = 0.057 error progress = 3.44149% |
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| 89 | completion: 28% (epoch=56)(element=6266) loss = 0.052 error progress = 3.39487% |
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| 90 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 3.35885% |
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| 91 | completion: 36% (epoch=72)(element=6266) loss = 0.038 error progress = 3.32977% |
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| 92 | completion: 40% (epoch=80)(element=6266) loss = 0.003 error progress = 3.30603% |
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| 93 | completion: 44% (epoch=88)(element=6266) loss = 0.04 error progress = 3.28492% |
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| 94 | completion: 48% (epoch=96)(element=6266) loss = 0.058 error progress = 3.26842% |
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| 95 | completion: 52% (epoch=104)(element=6266) loss = 0.035 error progress = 3.25426% |
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| 96 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 3.24281% |
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| 97 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 3.23154% |
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| 98 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 3.22166% |
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| 99 | completion: 68% (epoch=136)(element=6266) loss = 0.007 error progress = 3.21334% |
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| 100 | completion: 72% (epoch=144)(element=6266) loss = 0.011 error progress = 3.20607% |
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| 101 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 3.19931% |
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| 102 | completion: 80% (epoch=160)(element=6266) loss = 0.024 error progress = 3.19416% |
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| 103 | completion: 84% (epoch=168)(element=6266) loss = 0.022 error progress = 3.18925% |
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| 104 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 3.18364% |
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| 105 | completion: 92% (epoch=184)(element=6266) loss = 0.02 error progress = 3.17848% |
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| 106 | completion: 96% (epoch=192)(element=6266) loss = 0.01 error progress = 3.17482% |
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| 107 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 3.17125% |
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| 108 | |||
| 109 | |||
| 110 | ### executeTest(perceptron, validation_patient_profile) |
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| 111 | |||
| 112 | Correct predictions = 79.18% |
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| 113 | #FPplusFN=2089 |
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| 114 | minError=308 minErrorIndex=1 globalThreshold =-1.2494727665943 |
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| 115 | metrics area_roc = 86.44% |
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| 116 | (beta) metrics area_precision_recall = 61.32% |
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| 117 | |||
| 118 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
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| 119 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
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| 120 | TOTAL: |
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| 121 | FN = 430 / 516 (truth == 1) & (prediction < threshold) |
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| 122 | TP = 86 / 516 (truth == 1) & (prediction >= threshold) |
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| 123 | |||
| 124 | FP = 5 / 1,573 (truth == 0) & (prediction >= threshold) |
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| 125 | TN = 1,568 / 1,573 (truth == 0) & (prediction < threshold) |
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| 126 | |||
| 127 | |||
| 128 | :::: Matthews correlation coefficient = +0.35 :::: |
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| 129 | |||
| 130 | accuracy = 0.79 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
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| 131 | recall = 0.17 = tp / (tp + fn) [worst = 0, best = 1] |
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| 132 | specificity = 1 = tn / (tn + fp) [worst = 0, best = 1] |
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| 133 | f1_score = 0.28 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
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| 134 | Saved model file: ./models/model_hus10_hl1_time1524250000 |
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| 135 | |||
| 136 | $$$ hidden_units = 25 hidden_layers = 1 $$$ |
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| 137 | XAVIER_INITIALIZATION = true |
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| 138 | completion: 4% (epoch=8)(element=6266) loss = 0.02 error progress = 3.1868% |
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| 139 | completion: 8% (epoch=16)(element=6266) loss = 0.002 error progress = 3.04092% |
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| 140 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.96526% |
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| 141 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.9172% |
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| 142 | completion: 20% (epoch=40)(element=6266) loss = 0.027 error progress = 2.88082% |
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| 143 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.8563% |
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| 144 | completion: 28% (epoch=56)(element=6266) loss = 0.007 error progress = 2.83537% |
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| 145 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.81819% |
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| 146 | completion: 36% (epoch=72)(element=6266) loss = 0.014 error progress = 2.80508% |
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| 147 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.79679% |
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| 148 | completion: 44% (epoch=88)(element=6266) loss = 0.058 error progress = 2.78757% |
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| 149 | completion: 48% (epoch=96)(element=6266) loss = 0.015 error progress = 2.77778% |
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| 150 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.76994% |
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| 151 | completion: 56% (epoch=112)(element=6266) loss = 0.022 error progress = 2.76235% |
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| 152 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.75424% |
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| 153 | completion: 64% (epoch=128)(element=6266) loss = 0.018 error progress = 2.74606% |
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| 154 | completion: 68% (epoch=136)(element=6266) loss = 0.012 error progress = 2.73867% |
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| 155 | completion: 72% (epoch=144)(element=6266) loss = 0.041 error progress = 2.73052% |
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| 156 | completion: 76% (epoch=152)(element=6266) loss = 0.026 error progress = 2.72341% |
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| 157 | completion: 80% (epoch=160)(element=6266) loss = 0.028 error progress = 2.71585% |
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| 158 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 2.70746% |
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| 159 | completion: 88% (epoch=176)(element=6266) loss = 0.003 error progress = 2.69881% |
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| 160 | completion: 92% (epoch=184)(element=6266) loss = 0.017 error progress = 2.69064% |
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| 161 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 2.68322% |
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| 162 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 2.67584% |
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| 163 | |||
| 164 | |||
| 165 | ### executeTest(perceptron, validation_patient_profile) |
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| 166 | |||
| 167 | Correct predictions = 81.91% |
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| 168 | #FPplusFN=2089 |
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| 169 | minError=268 minErrorIndex=1 globalThreshold =-1.4286710822746 |
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| 170 | metrics area_roc = 90.23% |
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| 171 | (beta) metrics area_precision_recall = 64.08% |
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| 172 | |||
| 173 | duration the new area_roc metrics ROC_AUC_computer function: 1 seconds |
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| 174 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 01 seconds |
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| 175 | TOTAL: |
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| 176 | FN = 331 / 516 (truth == 1) & (prediction < threshold) |
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| 177 | TP = 185 / 516 (truth == 1) & (prediction >= threshold) |
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| 178 | |||
| 179 | FP = 47 / 1,573 (truth == 0) & (prediction >= threshold) |
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| 180 | TN = 1,526 / 1,573 (truth == 0) & (prediction < threshold) |
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| 181 | |||
| 182 | |||
| 183 | :::: Matthews correlation coefficient = +0.45 :::: |
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| 184 | |||
| 185 | accuracy = 0.82 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
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| 186 | recall = 0.36 = tp / (tp + fn) [worst = 0, best = 1] |
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| 187 | specificity = 0.97 = tn / (tn + fp) [worst = 0, best = 1] |
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| 188 | f1_score = 0.49 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
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| 189 | Saved model file: ./models/model_hus25_hl1_time1524250152 |
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| 190 | |||
| 191 | $$$ hidden_units = 50 hidden_layers = 1 $$$ |
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| 192 | XAVIER_INITIALIZATION = true |
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| 193 | completion: 4% (epoch=8)(element=6266) loss = 0.028 error progress = 2.83821% |
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| 194 | completion: 8% (epoch=16)(element=6266) loss = 0.008 error progress = 2.65539% |
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| 195 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.55874% |
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| 196 | completion: 16% (epoch=32)(element=6266) loss = 0.008 error progress = 2.49752% |
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| 197 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.44955% |
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| 198 | completion: 24% (epoch=48)(element=6266) loss = 0.011 error progress = 2.41272% |
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| 199 | completion: 28% (epoch=56)(element=6266) loss = 0.006 error progress = 2.38568% |
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| 200 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 2.36345% |
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| 201 | completion: 36% (epoch=72)(element=6266) loss = 0.029 error progress = 2.34394% |
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| 202 | completion: 40% (epoch=80)(element=6266) loss = 0.014 error progress = 2.32674% |
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| 203 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.30992% |
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| 204 | completion: 48% (epoch=96)(element=6266) loss = 0.006 error progress = 2.2959% |
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| 205 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 2.28532% |
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| 206 | completion: 56% (epoch=112)(element=6266) loss = 0.01 error progress = 2.27475% |
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| 207 | completion: 60% (epoch=120)(element=6266) loss = 0.038 error progress = 2.26548% |
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| 208 | completion: 64% (epoch=128)(element=6266) loss = 0 error progress = 2.25662% |
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| 209 | completion: 68% (epoch=136)(element=6266) loss = 0.002 error progress = 2.24855% |
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| 210 | completion: 72% (epoch=144)(element=6266) loss = 0.002 error progress = 2.24037% |
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| 211 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.23308% |
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| 212 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.2273% |
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| 213 | completion: 84% (epoch=168)(element=6266) loss = 0.033 error progress = 2.22035% |
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| 214 | completion: 88% (epoch=176)(element=6266) loss = 0.018 error progress = 2.21478% |
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| 215 | completion: 92% (epoch=184)(element=6266) loss = 0.007 error progress = 2.20947% |
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| 216 | completion: 96% (epoch=192)(element=6266) loss = 0.004 error progress = 2.20517% |
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| 217 | completion: 100% (epoch=200)(element=6266) loss = 0.003 error progress = 2.20011% |
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| 218 | |||
| 219 | |||
| 220 | ### executeTest(perceptron, validation_patient_profile) |
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| 221 | |||
| 222 | Correct predictions = 83.48% |
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| 223 | #FPplusFN=2089 |
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| 224 | minError=236 minErrorIndex=1 globalThreshold =-1.3998626696854 |
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| 225 | metrics area_roc = 90.52% |
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| 226 | (beta) metrics area_precision_recall = 70.31% |
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| 227 | |||
| 228 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
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| 229 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
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| 230 | TOTAL: |
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| 231 | FN = 327 / 516 (truth == 1) & (prediction < threshold) |
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| 232 | TP = 189 / 516 (truth == 1) & (prediction >= threshold) |
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| 233 | |||
| 234 | FP = 18 / 1,573 (truth == 0) & (prediction >= threshold) |
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| 235 | TN = 1,555 / 1,573 (truth == 0) & (prediction < threshold) |
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| 236 | |||
| 237 | |||
| 238 | :::: Matthews correlation coefficient = +0.51 :::: |
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| 239 | |||
| 240 | accuracy = 0.83 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
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| 241 | recall = 0.37 = tp / (tp + fn) [worst = 0, best = 1] |
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| 242 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
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| 243 | f1_score = 0.52 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
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| 244 | Saved model file: ./models/model_hus50_hl1_time1524250316 |
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| 245 | |||
| 246 | $$$ hidden_units = 75 hidden_layers = 1 $$$ |
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| 247 | XAVIER_INITIALIZATION = true |
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| 248 | completion: 4% (epoch=8)(element=6266) loss = 0.01 error progress = 2.763% |
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| 249 | completion: 8% (epoch=16)(element=6266) loss = 0.005 error progress = 2.59353% |
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| 250 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.50799% |
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| 251 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.44845% |
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| 252 | completion: 20% (epoch=40)(element=6266) loss = 0.004 error progress = 2.4039% |
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| 253 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.37042% |
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| 254 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.34062% |
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| 255 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.31617% |
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| 256 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.29378% |
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| 257 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.27528% |
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| 258 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.25859% |
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| 259 | completion: 48% (epoch=96)(element=6266) loss = 0.004 error progress = 2.24325% |
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| 260 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.22898% |
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| 261 | completion: 56% (epoch=112)(element=6266) loss = 0.006 error progress = 2.21433% |
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| 262 | completion: 60% (epoch=120)(element=6266) loss = 0.036 error progress = 2.20193% |
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| 263 | completion: 64% (epoch=128)(element=6266) loss = 0.008 error progress = 2.19001% |
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| 264 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.17943% |
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| 265 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 2.16947% |
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| 266 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.16014% |
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| 267 | completion: 80% (epoch=160)(element=6266) loss = 0.022 error progress = 2.15084% |
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| 268 | completion: 84% (epoch=168)(element=6266) loss = 0.011 error progress = 2.14165% |
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| 269 | completion: 88% (epoch=176)(element=6266) loss = 0.021 error progress = 2.13325% |
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| 270 | completion: 92% (epoch=184)(element=6266) loss = 0.014 error progress = 2.12442% |
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| 271 | completion: 96% (epoch=192)(element=6266) loss = 0.005 error progress = 2.11634% |
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| 272 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 2.10852% |
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| 273 | |||
| 274 | |||
| 275 | ### executeTest(perceptron, validation_patient_profile) |
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| 276 | |||
| 277 | Correct predictions = 84.87% |
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| 278 | #FPplusFN=2089 |
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| 279 | minError=228 minErrorIndex=1 globalThreshold =-1.3890950601197 |
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| 280 | metrics area_roc = 90.84% |
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| 281 | (beta) metrics area_precision_recall = 70.92% |
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| 282 | |||
| 283 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
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| 284 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
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| 285 | TOTAL: |
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| 286 | FN = 303 / 516 (truth == 1) & (prediction < threshold) |
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| 287 | TP = 213 / 516 (truth == 1) & (prediction >= threshold) |
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| 288 | |||
| 289 | FP = 13 / 1,573 (truth == 0) & (prediction >= threshold) |
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| 290 | TN = 1,560 / 1,573 (truth == 0) & (prediction < threshold) |
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| 291 | |||
| 292 | |||
| 293 | :::: Matthews correlation coefficient = +0.56 :::: |
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| 294 | |||
| 295 | accuracy = 0.85 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
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| 296 | recall = 0.41 = tp / (tp + fn) [worst = 0, best = 1] |
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| 297 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
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| 298 | f1_score = 0.57 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
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| 299 | Saved model file: ./models/model_hus75_hl1_time1524250499 |
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| 300 | |||
| 301 | $$$ hidden_units = 100 hidden_layers = 1 $$$ |
||
| 302 | XAVIER_INITIALIZATION = true |
||
| 303 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.67066% |
||
| 304 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.50093% |
||
| 305 | completion: 12% (epoch=24)(element=6266) loss = 0.007 error progress = 2.41051% |
||
| 306 | completion: 16% (epoch=32)(element=6266) loss = 0.014 error progress = 2.34988% |
||
| 307 | completion: 20% (epoch=40)(element=6266) loss = 0.008 error progress = 2.30416% |
||
| 308 | completion: 24% (epoch=48)(element=6266) loss = 0.011 error progress = 2.26773% |
||
| 309 | completion: 28% (epoch=56)(element=6266) loss = 0.003 error progress = 2.2375% |
||
| 310 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.21165% |
||
| 311 | completion: 36% (epoch=72)(element=6266) loss = 0.009 error progress = 2.18916% |
||
| 312 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.17063% |
||
| 313 | completion: 44% (epoch=88)(element=6266) loss = 0.003 error progress = 2.15364% |
||
| 314 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.13653% |
||
| 315 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.12223% |
||
| 316 | completion: 56% (epoch=112)(element=6266) loss = 0.006 error progress = 2.10945% |
||
| 317 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 2.09837% |
||
| 318 | completion: 64% (epoch=128)(element=6266) loss = 0 error progress = 2.08765% |
||
| 319 | completion: 68% (epoch=136)(element=6266) loss = 0.015 error progress = 2.07786% |
||
| 320 | completion: 72% (epoch=144)(element=6266) loss = 0.004 error progress = 2.06745% |
||
| 321 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.05814% |
||
| 322 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.04923% |
||
| 323 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 2.04098% |
||
| 324 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 2.0336% |
||
| 325 | completion: 92% (epoch=184)(element=6266) loss = 0.017 error progress = 2.02492% |
||
| 326 | completion: 96% (epoch=192)(element=6266) loss = 0.003 error progress = 2.01782% |
||
| 327 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 2.01176% |
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| 328 | |||
| 329 | |||
| 330 | ### executeTest(perceptron, validation_patient_profile) |
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| 331 | |||
| 332 | Correct predictions = 86.55% |
||
| 333 | #FPplusFN=2089 |
||
| 334 | minError=229 minErrorIndex=1 globalThreshold =-1.4888626348271 |
||
| 335 | metrics area_roc = 90.74% |
||
| 336 | (beta) metrics area_precision_recall = 71.36% |
||
| 337 | |||
| 338 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 339 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 340 | TOTAL: |
||
| 341 | FN = 253 / 516 (truth == 1) & (prediction < threshold) |
||
| 342 | TP = 263 / 516 (truth == 1) & (prediction >= threshold) |
||
| 343 | |||
| 344 | FP = 28 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 345 | TN = 1,545 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 346 | |||
| 347 | |||
| 348 | :::: Matthews correlation coefficient = +0.61 :::: |
||
| 349 | |||
| 350 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 351 | recall = 0.51 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 352 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 353 | f1_score = 0.65 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 354 | Saved model file: ./models/model_hus100_hl1_time1524250700 |
||
| 355 | |||
| 356 | $$$ hidden_units = 125 hidden_layers = 1 $$$ |
||
| 357 | XAVIER_INITIALIZATION = true |
||
| 358 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.64841% |
||
| 359 | completion: 8% (epoch=16)(element=6266) loss = 0.024 error progress = 2.46762% |
||
| 360 | completion: 12% (epoch=24)(element=6266) loss = 0.011 error progress = 2.37778% |
||
| 361 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.31652% |
||
| 362 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.27137% |
||
| 363 | completion: 24% (epoch=48)(element=6266) loss = 0.004 error progress = 2.23663% |
||
| 364 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.20784% |
||
| 365 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.18162% |
||
| 366 | completion: 36% (epoch=72)(element=6266) loss = 0.012 error progress = 2.15905% |
||
| 367 | completion: 40% (epoch=80)(element=6266) loss = 0.004 error progress = 2.14073% |
||
| 368 | completion: 44% (epoch=88)(element=6266) loss = 0.007 error progress = 2.12262% |
||
| 369 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.10563% |
||
| 370 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 2.0896% |
||
| 371 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 2.0756% |
||
| 372 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.06398% |
||
| 373 | completion: 64% (epoch=128)(element=6266) loss = 0.007 error progress = 2.05212% |
||
| 374 | completion: 68% (epoch=136)(element=6266) loss = 0.014 error progress = 2.04135% |
||
| 375 | completion: 72% (epoch=144)(element=6266) loss = 0.013 error progress = 2.03138% |
||
| 376 | completion: 76% (epoch=152)(element=6266) loss = 0 error progress = 2.02275% |
||
| 377 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.01375% |
||
| 378 | completion: 84% (epoch=168)(element=6266) loss = 0.003 error progress = 2.00498% |
||
| 379 | completion: 88% (epoch=176)(element=6266) loss = 0.014 error progress = 1.99709% |
||
| 380 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.98948% |
||
| 381 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 1.98255% |
||
| 382 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.9762% |
||
| 383 | |||
| 384 | |||
| 385 | ### executeTest(perceptron, validation_patient_profile) |
||
| 386 | |||
| 387 | Correct predictions = 88.18% |
||
| 388 | #FPplusFN=2089 |
||
| 389 | minError=216 minErrorIndex=1 globalThreshold =-1.2742473296622 |
||
| 390 | metrics area_roc = 92.19% |
||
| 391 | (beta) metrics area_precision_recall = 71.96% |
||
| 392 | |||
| 393 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 394 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 395 | TOTAL: |
||
| 396 | FN = 203 / 516 (truth == 1) & (prediction < threshold) |
||
| 397 | TP = 313 / 516 (truth == 1) & (prediction >= threshold) |
||
| 398 | |||
| 399 | FP = 44 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 400 | TN = 1,529 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 401 | |||
| 402 | |||
| 403 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 404 | |||
| 405 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 406 | recall = 0.61 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 407 | specificity = 0.97 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 408 | f1_score = 0.72 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 409 | Saved model file: ./models/model_hus125_hl1_time1524250924 |
||
| 410 | |||
| 411 | $$$ hidden_units = 150 hidden_layers = 1 $$$ |
||
| 412 | XAVIER_INITIALIZATION = true |
||
| 413 | completion: 4% (epoch=8)(element=6266) loss = 0.003 error progress = 2.62352% |
||
| 414 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.44085% |
||
| 415 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.35185% |
||
| 416 | completion: 16% (epoch=32)(element=6266) loss = 0.013 error progress = 2.28839% |
||
| 417 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.24277% |
||
| 418 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.20891% |
||
| 419 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.17871% |
||
| 420 | completion: 32% (epoch=64)(element=6266) loss = 0.004 error progress = 2.15472% |
||
| 421 | completion: 36% (epoch=72)(element=6266) loss = 0 error progress = 2.13388% |
||
| 422 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.11462% |
||
| 423 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.09665% |
||
| 424 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.07982% |
||
| 425 | completion: 52% (epoch=104)(element=6266) loss = 0.005 error progress = 2.06357% |
||
| 426 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 2.04946% |
||
| 427 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 2.03652% |
||
| 428 | completion: 64% (epoch=128)(element=6266) loss = 0 error progress = 2.02311% |
||
| 429 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.01146% |
||
| 430 | completion: 72% (epoch=144)(element=6266) loss = 0.002 error progress = 2.0008% |
||
| 431 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 1.99077% |
||
| 432 | completion: 80% (epoch=160)(element=6266) loss = 0 error progress = 1.98035% |
||
| 433 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 1.97098% |
||
| 434 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.96161% |
||
| 435 | completion: 92% (epoch=184)(element=6266) loss = 0 error progress = 1.9544% |
||
| 436 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.94644% |
||
| 437 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.93945% |
||
| 438 | |||
| 439 | |||
| 440 | ### executeTest(perceptron, validation_patient_profile) |
||
| 441 | |||
| 442 | Correct predictions = 87.79% |
||
| 443 | #FPplusFN=2089 |
||
| 444 | minError=219 minErrorIndex=1 globalThreshold =-1.2212179487472 |
||
| 445 | metrics area_roc = 91.75% |
||
| 446 | (beta) metrics area_precision_recall = 72.27% |
||
| 447 | |||
| 448 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 449 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 450 | TOTAL: |
||
| 451 | FN = 225 / 516 (truth == 1) & (prediction < threshold) |
||
| 452 | TP = 291 / 516 (truth == 1) & (prediction >= threshold) |
||
| 453 | |||
| 454 | FP = 30 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 455 | TN = 1,543 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 456 | |||
| 457 | |||
| 458 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 459 | |||
| 460 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 461 | recall = 0.56 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 462 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 463 | f1_score = 0.7 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 464 | Saved model file: ./models/model_hus150_hl1_time1524251174 |
||
| 465 | |||
| 466 | $$$ hidden_units = 175 hidden_layers = 1 $$$ |
||
| 467 | XAVIER_INITIALIZATION = true |
||
| 468 | completion: 4% (epoch=8)(element=6266) loss = 0.003 error progress = 2.62269% |
||
| 469 | completion: 8% (epoch=16)(element=6266) loss = 0.015 error progress = 2.44834% |
||
| 470 | completion: 12% (epoch=24)(element=6266) loss = 0.011 error progress = 2.35088% |
||
| 471 | completion: 16% (epoch=32)(element=6266) loss = 0.004 error progress = 2.28736% |
||
| 472 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.24185% |
||
| 473 | completion: 24% (epoch=48)(element=6266) loss = 0.013 error progress = 2.20345% |
||
| 474 | completion: 28% (epoch=56)(element=6266) loss = 0.007 error progress = 2.17177% |
||
| 475 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.14309% |
||
| 476 | completion: 36% (epoch=72)(element=6266) loss = 0 error progress = 2.11874% |
||
| 477 | completion: 40% (epoch=80)(element=6266) loss = 0.004 error progress = 2.09819% |
||
| 478 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.0804% |
||
| 479 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.06414% |
||
| 480 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 2.04837% |
||
| 481 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 2.03389% |
||
| 482 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 2.02121% |
||
| 483 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.00853% |
||
| 484 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.99664% |
||
| 485 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.98595% |
||
| 486 | completion: 76% (epoch=152)(element=6266) loss = 0 error progress = 1.97527% |
||
| 487 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.96419% |
||
| 488 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 1.95401% |
||
| 489 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.9445% |
||
| 490 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 1.93577% |
||
| 491 | completion: 96% (epoch=192)(element=6266) loss = 0 error progress = 1.92849% |
||
| 492 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.92085% |
||
| 493 | |||
| 494 | |||
| 495 | ### executeTest(perceptron, validation_patient_profile) |
||
| 496 | |||
| 497 | Correct predictions = 87.6% |
||
| 498 | #FPplusFN=2089 |
||
| 499 | minError=222 minErrorIndex=1 globalThreshold =-1.3455914670115 |
||
| 500 | metrics area_roc = 91.62% |
||
| 501 | (beta) metrics area_precision_recall = 71.42% |
||
| 502 | |||
| 503 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 504 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 505 | TOTAL: |
||
| 506 | FN = 230 / 516 (truth == 1) & (prediction < threshold) |
||
| 507 | TP = 286 / 516 (truth == 1) & (prediction >= threshold) |
||
| 508 | |||
| 509 | FP = 29 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 510 | TN = 1,544 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 511 | |||
| 512 | |||
| 513 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 514 | |||
| 515 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 516 | recall = 0.55 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 517 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 518 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 519 | Saved model file: ./models/model_hus175_hl1_time1524251455 |
||
| 520 | |||
| 521 | $$$ hidden_units = 200 hidden_layers = 1 $$$ |
||
| 522 | XAVIER_INITIALIZATION = true |
||
| 523 | completion: 4% (epoch=8)(element=6266) loss = 0.004 error progress = 2.58594% |
||
| 524 | completion: 8% (epoch=16)(element=6266) loss = 0.003 error progress = 2.40493% |
||
| 525 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.31636% |
||
| 526 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.25651% |
||
| 527 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.21503% |
||
| 528 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.17955% |
||
| 529 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.15043% |
||
| 530 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.12859% |
||
| 531 | completion: 36% (epoch=72)(element=6266) loss = 0.004 error progress = 2.10777% |
||
| 532 | completion: 40% (epoch=80)(element=6266) loss = 0.005 error progress = 2.08733% |
||
| 533 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.06923% |
||
| 534 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.05367% |
||
| 535 | completion: 52% (epoch=104)(element=6266) loss = 0.004 error progress = 2.04013% |
||
| 536 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 2.02672% |
||
| 537 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.01409% |
||
| 538 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.00271% |
||
| 539 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.99084% |
||
| 540 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.97985% |
||
| 541 | completion: 76% (epoch=152)(element=6266) loss = 0.004 error progress = 1.96891% |
||
| 542 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 1.95843% |
||
| 543 | completion: 84% (epoch=168)(element=6266) loss = 0.004 error progress = 1.94834% |
||
| 544 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 1.93866% |
||
| 545 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.93003% |
||
| 546 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 1.92088% |
||
| 547 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 1.91248% |
||
| 548 | |||
| 549 | |||
| 550 | ### executeTest(perceptron, validation_patient_profile) |
||
| 551 | |||
| 552 | Correct predictions = 87.17% |
||
| 553 | #FPplusFN=2089 |
||
| 554 | minError=231 minErrorIndex=1 globalThreshold =-1.2050185649665 |
||
| 555 | metrics area_roc = 91.42% |
||
| 556 | (beta) metrics area_precision_recall = 71.42% |
||
| 557 | |||
| 558 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 559 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 560 | TOTAL: |
||
| 561 | FN = 239 / 516 (truth == 1) & (prediction < threshold) |
||
| 562 | TP = 277 / 516 (truth == 1) & (prediction >= threshold) |
||
| 563 | |||
| 564 | FP = 29 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 565 | TN = 1,544 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 566 | |||
| 567 | |||
| 568 | :::: Matthews correlation coefficient = +0.63 :::: |
||
| 569 | |||
| 570 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 571 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 572 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 573 | f1_score = 0.67 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 574 | Saved model file: ./models/model_hus200_hl1_time1524251765 |
||
| 575 | |||
| 576 | $$$ hidden_units = 225 hidden_layers = 1 $$$ |
||
| 577 | XAVIER_INITIALIZATION = true |
||
| 578 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.55706% |
||
| 579 | completion: 8% (epoch=16)(element=6266) loss = 0.002 error progress = 2.38834% |
||
| 580 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.30055% |
||
| 581 | completion: 16% (epoch=32)(element=6266) loss = 0.006 error progress = 2.24278% |
||
| 582 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.20015% |
||
| 583 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.16226% |
||
| 584 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.1315% |
||
| 585 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.10578% |
||
| 586 | completion: 36% (epoch=72)(element=6266) loss = 0.007 error progress = 2.08124% |
||
| 587 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.05994% |
||
| 588 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.03952% |
||
| 589 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.0216% |
||
| 590 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.0064% |
||
| 591 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 1.99162% |
||
| 592 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 1.97871% |
||
| 593 | completion: 64% (epoch=128)(element=6266) loss = 0 error progress = 1.96538% |
||
| 594 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.95384% |
||
| 595 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 1.94249% |
||
| 596 | completion: 76% (epoch=152)(element=6266) loss = 0.003 error progress = 1.93157% |
||
| 597 | completion: 80% (epoch=160)(element=6266) loss = 0.003 error progress = 1.92103% |
||
| 598 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.91103% |
||
| 599 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.90189% |
||
| 600 | completion: 92% (epoch=184)(element=6266) loss = 0.004 error progress = 1.89218% |
||
| 601 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.88374% |
||
| 602 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.87493% |
||
| 603 | |||
| 604 | |||
| 605 | ### executeTest(perceptron, validation_patient_profile) |
||
| 606 | |||
| 607 | Correct predictions = 87.75% |
||
| 608 | #FPplusFN=2089 |
||
| 609 | minError=219 minErrorIndex=1 globalThreshold =-1.2899969375674 |
||
| 610 | metrics area_roc = 91.97% |
||
| 611 | (beta) metrics area_precision_recall = 72.11% |
||
| 612 | |||
| 613 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 614 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 615 | TOTAL: |
||
| 616 | FN = 219 / 516 (truth == 1) & (prediction < threshold) |
||
| 617 | TP = 297 / 516 (truth == 1) & (prediction >= threshold) |
||
| 618 | |||
| 619 | FP = 37 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 620 | TN = 1,536 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 621 | |||
| 622 | |||
| 623 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 624 | |||
| 625 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 626 | recall = 0.58 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 627 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 628 | f1_score = 0.7 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 629 | Saved model file: ./models/model_hus225_hl1_time1524252108 |
||
| 630 | |||
| 631 | $$$ hidden_units = 250 hidden_layers = 1 $$$ |
||
| 632 | XAVIER_INITIALIZATION = true |
||
| 633 | completion: 4% (epoch=8)(element=6266) loss = 0.004 error progress = 2.56888% |
||
| 634 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.39275% |
||
| 635 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.3034% |
||
| 636 | completion: 16% (epoch=32)(element=6266) loss = 0.007 error progress = 2.24091% |
||
| 637 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.19461% |
||
| 638 | completion: 24% (epoch=48)(element=6266) loss = 0.003 error progress = 2.15509% |
||
| 639 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.12375% |
||
| 640 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 2.09606% |
||
| 641 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.07095% |
||
| 642 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.04894% |
||
| 643 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.02584% |
||
| 644 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.00841% |
||
| 645 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 1.99295% |
||
| 646 | completion: 56% (epoch=112)(element=6266) loss = 0.005 error progress = 1.97773% |
||
| 647 | completion: 60% (epoch=120)(element=6266) loss = 0.007 error progress = 1.96264% |
||
| 648 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.9486% |
||
| 649 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.93626% |
||
| 650 | completion: 72% (epoch=144)(element=6266) loss = 0.002 error progress = 1.92432% |
||
| 651 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.91253% |
||
| 652 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.90134% |
||
| 653 | completion: 84% (epoch=168)(element=6266) loss = 0.007 error progress = 1.89099% |
||
| 654 | completion: 88% (epoch=176)(element=6266) loss = 0.008 error progress = 1.88002% |
||
| 655 | completion: 92% (epoch=184)(element=6266) loss = 0.003 error progress = 1.87004% |
||
| 656 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.85982% |
||
| 657 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.85067% |
||
| 658 | |||
| 659 | |||
| 660 | ### executeTest(perceptron, validation_patient_profile) |
||
| 661 | |||
| 662 | Correct predictions = 87.36% |
||
| 663 | #FPplusFN=2089 |
||
| 664 | minError=232 minErrorIndex=1 globalThreshold =-1.3322010822586 |
||
| 665 | metrics area_roc = 91.79% |
||
| 666 | (beta) metrics area_precision_recall = 70.61% |
||
| 667 | |||
| 668 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 669 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 670 | TOTAL: |
||
| 671 | FN = 239 / 516 (truth == 1) & (prediction < threshold) |
||
| 672 | TP = 277 / 516 (truth == 1) & (prediction >= threshold) |
||
| 673 | |||
| 674 | FP = 25 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 675 | TN = 1,548 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 676 | |||
| 677 | |||
| 678 | :::: Matthews correlation coefficient = +0.64 :::: |
||
| 679 | |||
| 680 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 681 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 682 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 683 | f1_score = 0.68 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 684 | Saved model file: ./models/model_hus250_hl1_time1524252489 |
||
| 685 | |||
| 686 | $$$ hidden_units = 275 hidden_layers = 1 $$$ |
||
| 687 | XAVIER_INITIALIZATION = true |
||
| 688 | completion: 4% (epoch=8)(element=6266) loss = 0.002 error progress = 2.55723% |
||
| 689 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.37918% |
||
| 690 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.28823% |
||
| 691 | completion: 16% (epoch=32)(element=6266) loss = 0.003 error progress = 2.23119% |
||
| 692 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.18925% |
||
| 693 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.15265% |
||
| 694 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.12466% |
||
| 695 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.10049% |
||
| 696 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.08057% |
||
| 697 | completion: 40% (epoch=80)(element=6266) loss = 0.005 error progress = 2.06049% |
||
| 698 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.04153% |
||
| 699 | completion: 48% (epoch=96)(element=6266) loss = 0.005 error progress = 2.0251% |
||
| 700 | completion: 52% (epoch=104)(element=6266) loss = 0.003 error progress = 2.00918% |
||
| 701 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 1.99393% |
||
| 702 | completion: 60% (epoch=120)(element=6266) loss = 0.003 error progress = 1.97929% |
||
| 703 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 1.96672% |
||
| 704 | completion: 68% (epoch=136)(element=6266) loss = 0.005 error progress = 1.95437% |
||
| 705 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 1.94238% |
||
| 706 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.93107% |
||
| 707 | completion: 80% (epoch=160)(element=6266) loss = 0 error progress = 1.92048% |
||
| 708 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 1.91055% |
||
| 709 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.9005% |
||
| 710 | completion: 92% (epoch=184)(element=6266) loss = 0.013 error progress = 1.89166% |
||
| 711 | completion: 96% (epoch=192)(element=6266) loss = 0 error progress = 1.8836% |
||
| 712 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.8745% |
||
| 713 | |||
| 714 | |||
| 715 | ### executeTest(perceptron, validation_patient_profile) |
||
| 716 | |||
| 717 | Correct predictions = 88.99% |
||
| 718 | #FPplusFN=2089 |
||
| 719 | minError=215 minErrorIndex=1 globalThreshold =-1.1546718707295 |
||
| 720 | metrics area_roc = 92.3% |
||
| 721 | (beta) metrics area_precision_recall = 73.6% |
||
| 722 | |||
| 723 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 724 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 725 | TOTAL: |
||
| 726 | FN = 204 / 516 (truth == 1) & (prediction < threshold) |
||
| 727 | TP = 312 / 516 (truth == 1) & (prediction >= threshold) |
||
| 728 | |||
| 729 | FP = 26 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 730 | TN = 1,547 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 731 | |||
| 732 | |||
| 733 | :::: Matthews correlation coefficient = +0.69 :::: |
||
| 734 | |||
| 735 | accuracy = 0.89 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 736 | recall = 0.6 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 737 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 738 | f1_score = 0.73 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 739 | Saved model file: ./models/model_hus275_hl1_time1524252913 |
||
| 740 | |||
| 741 | $$$ hidden_units = 300 hidden_layers = 1 $$$ |
||
| 742 | XAVIER_INITIALIZATION = true |
||
| 743 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.54418% |
||
| 744 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.3636% |
||
| 745 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.27302% |
||
| 746 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.21307% |
||
| 747 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.16935% |
||
| 748 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.13393% |
||
| 749 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.10431% |
||
| 750 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.07867% |
||
| 751 | completion: 36% (epoch=72)(element=6266) loss = 0.004 error progress = 2.05649% |
||
| 752 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.03581% |
||
| 753 | completion: 44% (epoch=88)(element=6266) loss = 0.005 error progress = 2.01759% |
||
| 754 | completion: 48% (epoch=96)(element=6266) loss = 0.003 error progress = 2.0013% |
||
| 755 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 1.98719% |
||
| 756 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 1.97332% |
||
| 757 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 1.95897% |
||
| 758 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 1.94571% |
||
| 759 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.93344% |
||
| 760 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 1.92163% |
||
| 761 | completion: 76% (epoch=152)(element=6266) loss = 0.004 error progress = 1.91111% |
||
| 762 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.90085% |
||
| 763 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 1.89067% |
||
| 764 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.88045% |
||
| 765 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.8713% |
||
| 766 | completion: 96% (epoch=192)(element=6266) loss = 0 error progress = 1.86206% |
||
| 767 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.85306% |
||
| 768 | |||
| 769 | |||
| 770 | ### executeTest(perceptron, validation_patient_profile) |
||
| 771 | |||
| 772 | Correct predictions = 87.08% |
||
| 773 | #FPplusFN=2089 |
||
| 774 | minError=227 minErrorIndex=1 globalThreshold =-1.1760284250837 |
||
| 775 | metrics area_roc = 91.89% |
||
| 776 | (beta) metrics area_precision_recall = 71.01% |
||
| 777 | |||
| 778 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 779 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 780 | TOTAL: |
||
| 781 | FN = 249 / 516 (truth == 1) & (prediction < threshold) |
||
| 782 | TP = 267 / 516 (truth == 1) & (prediction >= threshold) |
||
| 783 | |||
| 784 | FP = 21 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 785 | TN = 1,552 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 786 | |||
| 787 | |||
| 788 | :::: Matthews correlation coefficient = +0.63 :::: |
||
| 789 | |||
| 790 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 791 | recall = 0.52 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 792 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 793 | f1_score = 0.66 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 794 | Saved model file: ./models/model_hus300_hl1_time1524253378 |
||
| 795 | |||
| 796 | $$$ hidden_units = 350 hidden_layers = 1 $$$ |
||
| 797 | XAVIER_INITIALIZATION = true |
||
| 798 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.53331% |
||
| 799 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.36159% |
||
| 800 | completion: 12% (epoch=24)(element=6266) loss = 0.002 error progress = 2.27257% |
||
| 801 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.21269% |
||
| 802 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.16675% |
||
| 803 | completion: 24% (epoch=48)(element=6266) loss = 0.002 error progress = 2.12917% |
||
| 804 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.09996% |
||
| 805 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.07304% |
||
| 806 | completion: 36% (epoch=72)(element=6266) loss = 0.003 error progress = 2.04955% |
||
| 807 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.02885% |
||
| 808 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.00999% |
||
| 809 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 1.99214% |
||
| 810 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 1.97741% |
||
| 811 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 1.96218% |
||
| 812 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 1.94735% |
||
| 813 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.93395% |
||
| 814 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 1.92125% |
||
| 815 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 1.90926% |
||
| 816 | completion: 76% (epoch=152)(element=6266) loss = 0 error progress = 1.89672% |
||
| 817 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.88559% |
||
| 818 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 1.87518% |
||
| 819 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.86468% |
||
| 820 | completion: 92% (epoch=184)(element=6266) loss = 0 error progress = 1.85413% |
||
| 821 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.84421% |
||
| 822 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.83449% |
||
| 823 | |||
| 824 | |||
| 825 | ### executeTest(perceptron, validation_patient_profile) |
||
| 826 | |||
| 827 | Correct predictions = 87.41% |
||
| 828 | #FPplusFN=2089 |
||
| 829 | minError=207 minErrorIndex=1 globalThreshold =-1.3718564063267 |
||
| 830 | metrics area_roc = 92.4% |
||
| 831 | (beta) metrics area_precision_recall = 72.91% |
||
| 832 | |||
| 833 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 834 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 835 | TOTAL: |
||
| 836 | FN = 248 / 516 (truth == 1) & (prediction < threshold) |
||
| 837 | TP = 268 / 516 (truth == 1) & (prediction >= threshold) |
||
| 838 | |||
| 839 | FP = 15 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 840 | TN = 1,558 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 841 | |||
| 842 | |||
| 843 | :::: Matthews correlation coefficient = +0.64 :::: |
||
| 844 | |||
| 845 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 846 | recall = 0.52 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 847 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 848 | f1_score = 0.67 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 849 | Saved model file: ./models/model_hus350_hl1_time1524253954 |
||
| 850 | |||
| 851 | $$$ hidden_units = 400 hidden_layers = 1 $$$ |
||
| 852 | XAVIER_INITIALIZATION = true |
||
| 853 | completion: 4% (epoch=8)(element=6266) loss = 0.004 error progress = 2.5275% |
||
| 854 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.3521% |
||
| 855 | completion: 12% (epoch=24)(element=6266) loss = 0.002 error progress = 2.26182% |
||
| 856 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.19943% |
||
| 857 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.15337% |
||
| 858 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.11832% |
||
| 859 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.08853% |
||
| 860 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.06167% |
||
| 861 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.03817% |
||
| 862 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.01799% |
||
| 863 | completion: 44% (epoch=88)(element=6266) loss = 0.003 error progress = 1.99955% |
||
| 864 | completion: 48% (epoch=96)(element=6266) loss = 0.003 error progress = 1.98067% |
||
| 865 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 1.96343% |
||
| 866 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 1.94798% |
||
| 867 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 1.93214% |
||
| 868 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 1.91797% |
||
| 869 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 1.90463% |
||
| 870 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.89155% |
||
| 871 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.88024% |
||
| 872 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 1.86808% |
||
| 873 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 1.85697% |
||
| 874 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.84636% |
||
| 875 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.83638% |
||
| 876 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 1.82598% |
||
| 877 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.81631% |
||
| 878 | |||
| 879 | |||
| 880 | ### executeTest(perceptron, validation_patient_profile) |
||
| 881 | |||
| 882 | Correct predictions = 87.12% |
||
| 883 | #FPplusFN=2089 |
||
| 884 | minError=224 minErrorIndex=1 globalThreshold =-1.6962178234128 |
||
| 885 | metrics area_roc = 91.63% |
||
| 886 | (beta) metrics area_precision_recall = 70.55% |
||
| 887 | |||
| 888 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 889 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 890 | TOTAL: |
||
| 891 | FN = 234 / 516 (truth == 1) & (prediction < threshold) |
||
| 892 | TP = 282 / 516 (truth == 1) & (prediction >= threshold) |
||
| 893 | |||
| 894 | FP = 35 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 895 | TN = 1,538 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 896 | |||
| 897 | |||
| 898 | :::: Matthews correlation coefficient = +0.63 :::: |
||
| 899 | |||
| 900 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 901 | recall = 0.55 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 902 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 903 | f1_score = 0.68 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 904 | Saved model file: ./models/model_hus400_hl1_time1524254634 |
||
| 905 | |||
| 906 | $$$ hidden_units = 5 hidden_layers = 2 $$$ |
||
| 907 | XAVIER_INITIALIZATION = true |
||
| 908 | completion: 4% (epoch=8)(element=6266) loss = 0.062 error progress = 4.4478% |
||
| 909 | completion: 8% (epoch=16)(element=6266) loss = 0.088 error progress = 4.34054% |
||
| 910 | completion: 12% (epoch=24)(element=6266) loss = 0.031 error progress = 4.29406% |
||
| 911 | completion: 16% (epoch=32)(element=6266) loss = 0.051 error progress = 4.25705% |
||
| 912 | completion: 20% (epoch=40)(element=6266) loss = 0.066 error progress = 4.22893% |
||
| 913 | completion: 24% (epoch=48)(element=6266) loss = 0.07 error progress = 4.20333% |
||
| 914 | completion: 28% (epoch=56)(element=6266) loss = 0.052 error progress = 4.1792% |
||
| 915 | completion: 32% (epoch=64)(element=6266) loss = 0.021 error progress = 4.15595% |
||
| 916 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 4.13768% |
||
| 917 | completion: 40% (epoch=80)(element=6266) loss = 0.02 error progress = 4.12419% |
||
| 918 | completion: 44% (epoch=88)(element=6266) loss = 0.064 error progress = 4.11533% |
||
| 919 | completion: 48% (epoch=96)(element=6266) loss = 0.18 error progress = 4.12473% |
||
| 920 | completion: 52% (epoch=104)(element=6266) loss = 0.003 error progress = 4.13902% |
||
| 921 | completion: 56% (epoch=112)(element=6266) loss = 0.004 error progress = 4.15176% |
||
| 922 | completion: 60% (epoch=120)(element=6266) loss = 0.047 error progress = 4.16135% |
||
| 923 | completion: 64% (epoch=128)(element=6266) loss = 0.028 error progress = 4.17165% |
||
| 924 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 4.17978% |
||
| 925 | completion: 72% (epoch=144)(element=6266) loss = 0.002 error progress = 4.18614% |
||
| 926 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 4.19174% |
||
| 927 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 4.19599% |
||
| 928 | completion: 84% (epoch=168)(element=6266) loss = 0.054 error progress = 4.20084% |
||
| 929 | completion: 88% (epoch=176)(element=6266) loss = 0.177 error progress = 4.20531% |
||
| 930 | completion: 92% (epoch=184)(element=6266) loss = 0.028 error progress = 4.20933% |
||
| 931 | completion: 96% (epoch=192)(element=6266) loss = 0.039 error progress = 4.21309% |
||
| 932 | completion: 100% (epoch=200)(element=6266) loss = 0.17 error progress = 4.21606% |
||
| 933 | |||
| 934 | |||
| 935 | ### executeTest(perceptron, validation_patient_profile) |
||
| 936 | |||
| 937 | Correct predictions = 75.3% |
||
| 938 | ATTENTION: all the predictions are FALSE |
||
| 939 | #FPplusFN=2089 |
||
| 940 | minError=516 minErrorIndex=1 globalThreshold =-0.98048917221885 |
||
| 941 | metrics area_roc = 71.41% |
||
| 942 | (beta) metrics area_precision_recall = 27.71% |
||
| 943 | |||
| 944 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 945 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 946 | TOTAL: |
||
| 947 | FN = 516 / 516 (truth == 1) & (prediction < threshold) |
||
| 948 | TP = 0 / 516 (truth == 1) & (prediction >= threshold) |
||
| 949 | |||
| 950 | FP = 0 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 951 | TN = 1,573 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 952 | |||
| 953 | Matthews correlation coefficient = NOT computable |
||
| 954 | accuracy = 0.75 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 955 | recall = 0 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 956 | specificity = 1 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 957 | f1_score = 0 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 958 | Saved model file: ./models/model_hus5_hl2_time1524254823 |
||
| 959 | |||
| 960 | $$$ hidden_units = 10 hidden_layers = 2 $$$ |
||
| 961 | XAVIER_INITIALIZATION = true |
||
| 962 | completion: 4% (epoch=8)(element=6266) loss = 0.134 error progress = 4.16773% |
||
| 963 | completion: 8% (epoch=16)(element=6266) loss = 0.012 error progress = 3.88495% |
||
| 964 | completion: 12% (epoch=24)(element=6266) loss = 0.07 error progress = 3.77886% |
||
| 965 | completion: 16% (epoch=32)(element=6266) loss = 0.028 error progress = 3.71804% |
||
| 966 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 3.67797% |
||
| 967 | completion: 24% (epoch=48)(element=6266) loss = 0.039 error progress = 3.64375% |
||
| 968 | completion: 28% (epoch=56)(element=6266) loss = 0.019 error progress = 3.62071% |
||
| 969 | completion: 32% (epoch=64)(element=6266) loss = 0.061 error progress = 3.60072% |
||
| 970 | completion: 36% (epoch=72)(element=6266) loss = 0.013 error progress = 3.57993% |
||
| 971 | completion: 40% (epoch=80)(element=6266) loss = 0.045 error progress = 3.55376% |
||
| 972 | completion: 44% (epoch=88)(element=6266) loss = 0.006 error progress = 3.53169% |
||
| 973 | completion: 48% (epoch=96)(element=6266) loss = 0.011 error progress = 3.51517% |
||
| 974 | completion: 52% (epoch=104)(element=6266) loss = 0.08 error progress = 3.49869% |
||
| 975 | completion: 56% (epoch=112)(element=6266) loss = 0.158 error progress = 3.48492% |
||
| 976 | completion: 60% (epoch=120)(element=6266) loss = 0.003 error progress = 3.47463% |
||
| 977 | completion: 64% (epoch=128)(element=6266) loss = 0.043 error progress = 3.46422% |
||
| 978 | completion: 68% (epoch=136)(element=6266) loss = 0.052 error progress = 3.45402% |
||
| 979 | completion: 72% (epoch=144)(element=6266) loss = 0.038 error progress = 3.44312% |
||
| 980 | completion: 76% (epoch=152)(element=6266) loss = 0.031 error progress = 3.43251% |
||
| 981 | completion: 80% (epoch=160)(element=6266) loss = 0.004 error progress = 3.42524% |
||
| 982 | completion: 84% (epoch=168)(element=6266) loss = 0.021 error progress = 3.41719% |
||
| 983 | completion: 88% (epoch=176)(element=6266) loss = 0.004 error progress = 3.40897% |
||
| 984 | completion: 92% (epoch=184)(element=6266) loss = 0.008 error progress = 3.40204% |
||
| 985 | completion: 96% (epoch=192)(element=6266) loss = 0.004 error progress = 3.39531% |
||
| 986 | completion: 100% (epoch=200)(element=6266) loss = 0.024 error progress = 3.389% |
||
| 987 | |||
| 988 | |||
| 989 | ### executeTest(perceptron, validation_patient_profile) |
||
| 990 | |||
| 991 | Correct predictions = 77.98% |
||
| 992 | #FPplusFN=2089 |
||
| 993 | minError=339 minErrorIndex=1 globalThreshold =-1.8767338008691 |
||
| 994 | metrics area_roc = 85.56% |
||
| 995 | (beta) metrics area_precision_recall = 52.92% |
||
| 996 | |||
| 997 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 998 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 999 | TOTAL: |
||
| 1000 | FN = 439 / 516 (truth == 1) & (prediction < threshold) |
||
| 1001 | TP = 77 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1002 | |||
| 1003 | FP = 21 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1004 | TN = 1,552 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1005 | |||
| 1006 | |||
| 1007 | :::: Matthews correlation coefficient = +0.28 :::: |
||
| 1008 | |||
| 1009 | accuracy = 0.78 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1010 | recall = 0.15 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1011 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1012 | f1_score = 0.25 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1013 | Saved model file: ./models/model_hus10_hl2_time1524255019 |
||
| 1014 | |||
| 1015 | $$$ hidden_units = 25 hidden_layers = 2 $$$ |
||
| 1016 | XAVIER_INITIALIZATION = true |
||
| 1017 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 3.3039% |
||
| 1018 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 3.09878% |
||
| 1019 | completion: 12% (epoch=24)(element=6266) loss = 0.033 error progress = 3.00747% |
||
| 1020 | completion: 16% (epoch=32)(element=6266) loss = 0.062 error progress = 2.95111% |
||
| 1021 | completion: 20% (epoch=40)(element=6266) loss = 0.004 error progress = 2.90497% |
||
| 1022 | completion: 24% (epoch=48)(element=6266) loss = 0.01 error progress = 2.87331% |
||
| 1023 | completion: 28% (epoch=56)(element=6266) loss = 0.007 error progress = 2.84564% |
||
| 1024 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.81911% |
||
| 1025 | completion: 36% (epoch=72)(element=6266) loss = 0.005 error progress = 2.79799% |
||
| 1026 | completion: 40% (epoch=80)(element=6266) loss = 0.03 error progress = 2.77855% |
||
| 1027 | completion: 44% (epoch=88)(element=6266) loss = 0.013 error progress = 2.7628% |
||
| 1028 | completion: 48% (epoch=96)(element=6266) loss = 0.016 error progress = 2.74696% |
||
| 1029 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 2.73274% |
||
| 1030 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 2.72037% |
||
| 1031 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 2.70992% |
||
| 1032 | completion: 64% (epoch=128)(element=6266) loss = 0.142 error progress = 2.70047% |
||
| 1033 | completion: 68% (epoch=136)(element=6266) loss = 0.026 error progress = 2.69105% |
||
| 1034 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 2.68158% |
||
| 1035 | completion: 76% (epoch=152)(element=6266) loss = 0 error progress = 2.67246% |
||
| 1036 | completion: 80% (epoch=160)(element=6266) loss = 0.007 error progress = 2.6645% |
||
| 1037 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 2.65716% |
||
| 1038 | completion: 88% (epoch=176)(element=6266) loss = 0.003 error progress = 2.64947% |
||
| 1039 | completion: 92% (epoch=184)(element=6266) loss = 0.007 error progress = 2.64193% |
||
| 1040 | completion: 96% (epoch=192)(element=6266) loss = 0 error progress = 2.63528% |
||
| 1041 | completion: 100% (epoch=200)(element=6266) loss = 0.017 error progress = 2.62833% |
||
| 1042 | |||
| 1043 | |||
| 1044 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1045 | |||
| 1046 | Correct predictions = 82.19% |
||
| 1047 | #FPplusFN=2089 |
||
| 1048 | minError=308 minErrorIndex=1 globalThreshold =-1.3810422280757 |
||
| 1049 | metrics area_roc = 88.09% |
||
| 1050 | (beta) metrics area_precision_recall = 60.71% |
||
| 1051 | |||
| 1052 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1053 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1054 | TOTAL: |
||
| 1055 | FN = 325 / 516 (truth == 1) & (prediction < threshold) |
||
| 1056 | TP = 191 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1057 | |||
| 1058 | FP = 47 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1059 | TN = 1,526 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1060 | |||
| 1061 | |||
| 1062 | :::: Matthews correlation coefficient = +0.46 :::: |
||
| 1063 | |||
| 1064 | accuracy = 0.82 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1065 | recall = 0.37 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1066 | specificity = 0.97 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1067 | f1_score = 0.51 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1068 | Saved model file: ./models/model_hus25_hl2_time1524255225 |
||
| 1069 | |||
| 1070 | $$$ hidden_units = 50 hidden_layers = 2 $$$ |
||
| 1071 | XAVIER_INITIALIZATION = true |
||
| 1072 | completion: 4% (epoch=8)(element=6266) loss = 0.002 error progress = 3.03423% |
||
| 1073 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.80857% |
||
| 1074 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.69884% |
||
| 1075 | completion: 16% (epoch=32)(element=6266) loss = 0.005 error progress = 2.63192% |
||
| 1076 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.5847% |
||
| 1077 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.54398% |
||
| 1078 | completion: 28% (epoch=56)(element=6266) loss = 0.079 error progress = 2.51247% |
||
| 1079 | completion: 32% (epoch=64)(element=6266) loss = 0.005 error progress = 2.48469% |
||
| 1080 | completion: 36% (epoch=72)(element=6266) loss = 0 error progress = 2.46189% |
||
| 1081 | completion: 40% (epoch=80)(element=6266) loss = 0.009 error progress = 2.44041% |
||
| 1082 | completion: 44% (epoch=88)(element=6266) loss = 0.006 error progress = 2.42002% |
||
| 1083 | completion: 48% (epoch=96)(element=6266) loss = 0.007 error progress = 2.40296% |
||
| 1084 | completion: 52% (epoch=104)(element=6266) loss = 0.005 error progress = 2.3876% |
||
| 1085 | completion: 56% (epoch=112)(element=6266) loss = 0.004 error progress = 2.37406% |
||
| 1086 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 2.36% |
||
| 1087 | completion: 64% (epoch=128)(element=6266) loss = 0.004 error progress = 2.34648% |
||
| 1088 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 2.33471% |
||
| 1089 | completion: 72% (epoch=144)(element=6266) loss = 0.003 error progress = 2.32192% |
||
| 1090 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.31006% |
||
| 1091 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 2.29863% |
||
| 1092 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 2.29002% |
||
| 1093 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 2.28085% |
||
| 1094 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 2.27158% |
||
| 1095 | completion: 96% (epoch=192)(element=6266) loss = 0.003 error progress = 2.26376% |
||
| 1096 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 2.25581% |
||
| 1097 | |||
| 1098 | |||
| 1099 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1100 | |||
| 1101 | Correct predictions = 83.63% |
||
| 1102 | #FPplusFN=2089 |
||
| 1103 | minError=247 minErrorIndex=1 globalThreshold =-1.0383644458129 |
||
| 1104 | metrics area_roc = 90.45% |
||
| 1105 | (beta) metrics area_precision_recall = 64.93% |
||
| 1106 | |||
| 1107 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1108 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1109 | TOTAL: |
||
| 1110 | FN = 301 / 516 (truth == 1) & (prediction < threshold) |
||
| 1111 | TP = 215 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1112 | |||
| 1113 | FP = 41 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1114 | TN = 1,532 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1115 | |||
| 1116 | |||
| 1117 | :::: Matthews correlation coefficient = +0.51 :::: |
||
| 1118 | |||
| 1119 | accuracy = 0.84 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1120 | recall = 0.42 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1121 | specificity = 0.97 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1122 | f1_score = 0.56 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1123 | Saved model file: ./models/model_hus50_hl2_time1524255449 |
||
| 1124 | |||
| 1125 | $$$ hidden_units = 75 hidden_layers = 2 $$$ |
||
| 1126 | XAVIER_INITIALIZATION = true |
||
| 1127 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.89542% |
||
| 1128 | completion: 8% (epoch=16)(element=6266) loss = 0.007 error progress = 2.68923% |
||
| 1129 | completion: 12% (epoch=24)(element=6266) loss = 0.011 error progress = 2.57874% |
||
| 1130 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.50582% |
||
| 1131 | completion: 20% (epoch=40)(element=6266) loss = 0.008 error progress = 2.45528% |
||
| 1132 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.41193% |
||
| 1133 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.37764% |
||
| 1134 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.35018% |
||
| 1135 | completion: 36% (epoch=72)(element=6266) loss = 0 error progress = 2.32678% |
||
| 1136 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.30598% |
||
| 1137 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.28779% |
||
| 1138 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.27095% |
||
| 1139 | completion: 52% (epoch=104)(element=6266) loss = 0.003 error progress = 2.25683% |
||
| 1140 | completion: 56% (epoch=112)(element=6266) loss = 0.003 error progress = 2.24235% |
||
| 1141 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.22843% |
||
| 1142 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.2145% |
||
| 1143 | completion: 68% (epoch=136)(element=6266) loss = 0.003 error progress = 2.20129% |
||
| 1144 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.18939% |
||
| 1145 | completion: 76% (epoch=152)(element=6266) loss = 0.004 error progress = 2.17805% |
||
| 1146 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 2.16779% |
||
| 1147 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 2.15811% |
||
| 1148 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 2.14995% |
||
| 1149 | completion: 92% (epoch=184)(element=6266) loss = 0.003 error progress = 2.14154% |
||
| 1150 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 2.13321% |
||
| 1151 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 2.12516% |
||
| 1152 | |||
| 1153 | |||
| 1154 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1155 | |||
| 1156 | Correct predictions = 86.69% |
||
| 1157 | #FPplusFN=2089 |
||
| 1158 | minError=229 minErrorIndex=1 globalThreshold =-1.0591847281323 |
||
| 1159 | metrics area_roc = 91.11% |
||
| 1160 | (beta) metrics area_precision_recall = 68.5% |
||
| 1161 | |||
| 1162 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1163 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1164 | TOTAL: |
||
| 1165 | FN = 244 / 516 (truth == 1) & (prediction < threshold) |
||
| 1166 | TP = 272 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1167 | |||
| 1168 | FP = 34 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1169 | TN = 1,539 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1170 | |||
| 1171 | |||
| 1172 | :::: Matthews correlation coefficient = +0.62 :::: |
||
| 1173 | |||
| 1174 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1175 | recall = 0.53 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1176 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1177 | f1_score = 0.66 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1178 | Saved model file: ./models/model_hus75_hl2_time1524255699 |
||
| 1179 | |||
| 1180 | $$$ hidden_units = 100 hidden_layers = 2 $$$ |
||
| 1181 | XAVIER_INITIALIZATION = true |
||
| 1182 | completion: 4% (epoch=8)(element=6266) loss = 0.003 error progress = 2.80657% |
||
| 1183 | completion: 8% (epoch=16)(element=6266) loss = 0.01 error progress = 2.61688% |
||
| 1184 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.52143% |
||
| 1185 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.45395% |
||
| 1186 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.4021% |
||
| 1187 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.35554% |
||
| 1188 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.32164% |
||
| 1189 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.29387% |
||
| 1190 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.26698% |
||
| 1191 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.24546% |
||
| 1192 | completion: 44% (epoch=88)(element=6266) loss = 0.002 error progress = 2.22508% |
||
| 1193 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.20826% |
||
| 1194 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.19207% |
||
| 1195 | completion: 56% (epoch=112)(element=6266) loss = 0.003 error progress = 2.17705% |
||
| 1196 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.16428% |
||
| 1197 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.14919% |
||
| 1198 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 2.13669% |
||
| 1199 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.12406% |
||
| 1200 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 2.11344% |
||
| 1201 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 2.10306% |
||
| 1202 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 2.09188% |
||
| 1203 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 2.08233% |
||
| 1204 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 2.07372% |
||
| 1205 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 2.06471% |
||
| 1206 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 2.0565% |
||
| 1207 | |||
| 1208 | |||
| 1209 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1210 | |||
| 1211 | Correct predictions = 87.17% |
||
| 1212 | #FPplusFN=2089 |
||
| 1213 | minError=226 minErrorIndex=1 globalThreshold =-1.0811402275798 |
||
| 1214 | metrics area_roc = 90.52% |
||
| 1215 | (beta) metrics area_precision_recall = 54.64% |
||
| 1216 | |||
| 1217 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1218 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1219 | TOTAL: |
||
| 1220 | FN = 253 / 516 (truth == 1) & (prediction < threshold) |
||
| 1221 | TP = 263 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1222 | |||
| 1223 | FP = 15 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1224 | TN = 1,558 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1225 | |||
| 1226 | |||
| 1227 | :::: Matthews correlation coefficient = +0.64 :::: |
||
| 1228 | |||
| 1229 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1230 | recall = 0.51 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1231 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1232 | f1_score = 0.66 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1233 | Saved model file: ./models/model_hus100_hl2_time1524255980 |
||
| 1234 | |||
| 1235 | $$$ hidden_units = 125 hidden_layers = 2 $$$ |
||
| 1236 | XAVIER_INITIALIZATION = true |
||
| 1237 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.80471% |
||
| 1238 | completion: 8% (epoch=16)(element=6266) loss = 0.007 error progress = 2.59629% |
||
| 1239 | completion: 12% (epoch=24)(element=6266) loss = 0.002 error progress = 2.49442% |
||
| 1240 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.42856% |
||
| 1241 | completion: 20% (epoch=40)(element=6266) loss = 0.003 error progress = 2.37736% |
||
| 1242 | completion: 24% (epoch=48)(element=6266) loss = 0.002 error progress = 2.33771% |
||
| 1243 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.3037% |
||
| 1244 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 2.27855% |
||
| 1245 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.25575% |
||
| 1246 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.23567% |
||
| 1247 | completion: 44% (epoch=88)(element=6266) loss = 0.002 error progress = 2.2152% |
||
| 1248 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.1983% |
||
| 1249 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.18224% |
||
| 1250 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 2.16786% |
||
| 1251 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.15423% |
||
| 1252 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.14061% |
||
| 1253 | completion: 68% (epoch=136)(element=6266) loss = 0.003 error progress = 2.12867% |
||
| 1254 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.1172% |
||
| 1255 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 2.1061% |
||
| 1256 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.09607% |
||
| 1257 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 2.08658% |
||
| 1258 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 2.07769% |
||
| 1259 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 2.06959% |
||
| 1260 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 2.0614% |
||
| 1261 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 2.05352% |
||
| 1262 | |||
| 1263 | |||
| 1264 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1265 | |||
| 1266 | Correct predictions = 86.55% |
||
| 1267 | #FPplusFN=2089 |
||
| 1268 | minError=232 minErrorIndex=1 globalThreshold =-1.1476594590349 |
||
| 1269 | metrics area_roc = 90.85% |
||
| 1270 | (beta) metrics area_precision_recall = 70.31% |
||
| 1271 | |||
| 1272 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1273 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1274 | TOTAL: |
||
| 1275 | FN = 257 / 516 (truth == 1) & (prediction < threshold) |
||
| 1276 | TP = 259 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1277 | |||
| 1278 | FP = 24 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1279 | TN = 1,549 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1280 | |||
| 1281 | |||
| 1282 | :::: Matthews correlation coefficient = +0.61 :::: |
||
| 1283 | |||
| 1284 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1285 | recall = 0.5 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1286 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1287 | f1_score = 0.65 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1288 | Saved model file: ./models/model_hus125_hl2_time1524256300 |
||
| 1289 | |||
| 1290 | $$$ hidden_units = 150 hidden_layers = 2 $$$ |
||
| 1291 | XAVIER_INITIALIZATION = true |
||
| 1292 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.7524% |
||
| 1293 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.55546% |
||
| 1294 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.44562% |
||
| 1295 | completion: 16% (epoch=32)(element=6266) loss = 0.004 error progress = 2.36967% |
||
| 1296 | completion: 20% (epoch=40)(element=6266) loss = 0.003 error progress = 2.3091% |
||
| 1297 | completion: 24% (epoch=48)(element=6266) loss = 0.004 error progress = 2.26244% |
||
| 1298 | completion: 28% (epoch=56)(element=6266) loss = 0.003 error progress = 2.22516% |
||
| 1299 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 2.19423% |
||
| 1300 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.16807% |
||
| 1301 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.14502% |
||
| 1302 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.1242% |
||
| 1303 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.1061% |
||
| 1304 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 2.08865% |
||
| 1305 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 2.07156% |
||
| 1306 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.05645% |
||
| 1307 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.04186% |
||
| 1308 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.02835% |
||
| 1309 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.01417% |
||
| 1310 | completion: 76% (epoch=152)(element=6266) loss = 0.003 error progress = 2.00344% |
||
| 1311 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.99382% |
||
| 1312 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.98417% |
||
| 1313 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 1.97527% |
||
| 1314 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 1.96852% |
||
| 1315 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.9613% |
||
| 1316 | completion: 100% (epoch=200)(element=6266) loss = 0.003 error progress = 1.95307% |
||
| 1317 | |||
| 1318 | |||
| 1319 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1320 | |||
| 1321 | Correct predictions = 88.08% |
||
| 1322 | #FPplusFN=2089 |
||
| 1323 | minError=217 minErrorIndex=1 globalThreshold =-1.1579141103495 |
||
| 1324 | metrics area_roc = 92.18% |
||
| 1325 | (beta) metrics area_precision_recall = 72.67% |
||
| 1326 | |||
| 1327 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1328 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1329 | TOTAL: |
||
| 1330 | FN = 227 / 516 (truth == 1) & (prediction < threshold) |
||
| 1331 | TP = 289 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1332 | |||
| 1333 | FP = 22 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1334 | TN = 1,551 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1335 | |||
| 1336 | |||
| 1337 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 1338 | |||
| 1339 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1340 | recall = 0.56 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1341 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1342 | f1_score = 0.7 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1343 | Saved model file: ./models/model_hus150_hl2_time1524256668 |
||
| 1344 | |||
| 1345 | $$$ hidden_units = 175 hidden_layers = 2 $$$ |
||
| 1346 | XAVIER_INITIALIZATION = true |
||
| 1347 | completion: 4% (epoch=8)(element=6266) loss = 0.005 error progress = 2.72232% |
||
| 1348 | completion: 8% (epoch=16)(element=6266) loss = 0.002 error progress = 2.52464% |
||
| 1349 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.43254% |
||
| 1350 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.36457% |
||
| 1351 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.31441% |
||
| 1352 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.27246% |
||
| 1353 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.23588% |
||
| 1354 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.20396% |
||
| 1355 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.17532% |
||
| 1356 | completion: 40% (epoch=80)(element=6266) loss = 0.003 error progress = 2.14941% |
||
| 1357 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.1261% |
||
| 1358 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.10637% |
||
| 1359 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.08885% |
||
| 1360 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.07086% |
||
| 1361 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 2.05519% |
||
| 1362 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.03993% |
||
| 1363 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 2.02647% |
||
| 1364 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.01297% |
||
| 1365 | completion: 76% (epoch=152)(element=6266) loss = 0.003 error progress = 2.00113% |
||
| 1366 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.99051% |
||
| 1367 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 1.97963% |
||
| 1368 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 1.96947% |
||
| 1369 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.95916% |
||
| 1370 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.94962% |
||
| 1371 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.94005% |
||
| 1372 | |||
| 1373 | |||
| 1374 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1375 | |||
| 1376 | Correct predictions = 87.46% |
||
| 1377 | #FPplusFN=2089 |
||
| 1378 | minError=214 minErrorIndex=1 globalThreshold =-1.0872617133097 |
||
| 1379 | metrics area_roc = 91.91% |
||
| 1380 | (beta) metrics area_precision_recall = 72.44% |
||
| 1381 | |||
| 1382 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1383 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1384 | TOTAL: |
||
| 1385 | FN = 239 / 516 (truth == 1) & (prediction < threshold) |
||
| 1386 | TP = 277 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1387 | |||
| 1388 | FP = 23 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1389 | TN = 1,550 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1390 | |||
| 1391 | |||
| 1392 | :::: Matthews correlation coefficient = +0.64 :::: |
||
| 1393 | |||
| 1394 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1395 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1396 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1397 | f1_score = 0.68 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1398 | Saved model file: ./models/model_hus175_hl2_time1524257088 |
||
| 1399 | |||
| 1400 | $$$ hidden_units = 200 hidden_layers = 2 $$$ |
||
| 1401 | XAVIER_INITIALIZATION = true |
||
| 1402 | completion: 4% (epoch=8)(element=6266) loss = 0.016 error progress = 2.6887% |
||
| 1403 | completion: 8% (epoch=16)(element=6266) loss = 0.006 error progress = 2.51923% |
||
| 1404 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.4092% |
||
| 1405 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.33441% |
||
| 1406 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.27995% |
||
| 1407 | completion: 24% (epoch=48)(element=6266) loss = 0.03 error progress = 2.23636% |
||
| 1408 | completion: 28% (epoch=56)(element=6266) loss = 0.003 error progress = 2.20177% |
||
| 1409 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.17363% |
||
| 1410 | completion: 36% (epoch=72)(element=6266) loss = 0 error progress = 2.14784% |
||
| 1411 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.12273% |
||
| 1412 | completion: 44% (epoch=88)(element=6266) loss = 0.002 error progress = 2.1013% |
||
| 1413 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.08181% |
||
| 1414 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.06367% |
||
| 1415 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.04831% |
||
| 1416 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.03277% |
||
| 1417 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.01975% |
||
| 1418 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.00701% |
||
| 1419 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.99425% |
||
| 1420 | completion: 76% (epoch=152)(element=6266) loss = 0 error progress = 1.98267% |
||
| 1421 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.97118% |
||
| 1422 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.96131% |
||
| 1423 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.95195% |
||
| 1424 | completion: 92% (epoch=184)(element=6266) loss = 0 error progress = 1.94212% |
||
| 1425 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.93226% |
||
| 1426 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 1.92435% |
||
| 1427 | |||
| 1428 | |||
| 1429 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1430 | |||
| 1431 | Correct predictions = 88.42% |
||
| 1432 | #FPplusFN=2089 |
||
| 1433 | minError=201 minErrorIndex=1 globalThreshold =-1.0549830166475 |
||
| 1434 | metrics area_roc = 91.83% |
||
| 1435 | (beta) metrics area_precision_recall = 74.02% |
||
| 1436 | |||
| 1437 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1438 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1439 | TOTAL: |
||
| 1440 | FN = 218 / 516 (truth == 1) & (prediction < threshold) |
||
| 1441 | TP = 298 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1442 | |||
| 1443 | FP = 24 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1444 | TN = 1,549 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1445 | |||
| 1446 | |||
| 1447 | :::: Matthews correlation coefficient = +0.67 :::: |
||
| 1448 | |||
| 1449 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1450 | recall = 0.58 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1451 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1452 | f1_score = 0.71 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1453 | Saved model file: ./models/model_hus200_hl2_time1524257568 |
||
| 1454 | |||
| 1455 | $$$ hidden_units = 225 hidden_layers = 2 $$$ |
||
| 1456 | XAVIER_INITIALIZATION = true |
||
| 1457 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.68397% |
||
| 1458 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.48778% |
||
| 1459 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.38158% |
||
| 1460 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.30804% |
||
| 1461 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.25396% |
||
| 1462 | completion: 24% (epoch=48)(element=6266) loss = 0.006 error progress = 2.2118% |
||
| 1463 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.17647% |
||
| 1464 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.1443% |
||
| 1465 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.11732% |
||
| 1466 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.09413% |
||
| 1467 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.07107% |
||
| 1468 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.05168% |
||
| 1469 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.03441% |
||
| 1470 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.01849% |
||
| 1471 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.00347% |
||
| 1472 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.99158% |
||
| 1473 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.97914% |
||
| 1474 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 1.96791% |
||
| 1475 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.95718% |
||
| 1476 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 1.9464% |
||
| 1477 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.93632% |
||
| 1478 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.9272% |
||
| 1479 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.91805% |
||
| 1480 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.90983% |
||
| 1481 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.90069% |
||
| 1482 | |||
| 1483 | |||
| 1484 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1485 | |||
| 1486 | Correct predictions = 87.84% |
||
| 1487 | #FPplusFN=2089 |
||
| 1488 | minError=210 minErrorIndex=1 globalThreshold =-1.0306679537518 |
||
| 1489 | metrics area_roc = 92.09% |
||
| 1490 | (beta) metrics area_precision_recall = 71.73% |
||
| 1491 | |||
| 1492 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1493 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1494 | TOTAL: |
||
| 1495 | FN = 220 / 516 (truth == 1) & (prediction < threshold) |
||
| 1496 | TP = 296 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1497 | |||
| 1498 | FP = 34 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1499 | TN = 1,539 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1500 | |||
| 1501 | |||
| 1502 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 1503 | |||
| 1504 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1505 | recall = 0.57 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1506 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1507 | f1_score = 0.7 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1508 | Saved model file: ./models/model_hus225_hl2_time1524258109 |
||
| 1509 | |||
| 1510 | $$$ hidden_units = 250 hidden_layers = 2 $$$ |
||
| 1511 | XAVIER_INITIALIZATION = true |
||
| 1512 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.66085% |
||
| 1513 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.45966% |
||
| 1514 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.35676% |
||
| 1515 | completion: 16% (epoch=32)(element=6266) loss = 0.005 error progress = 2.286% |
||
| 1516 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.23499% |
||
| 1517 | completion: 24% (epoch=48)(element=6266) loss = 0.002 error progress = 2.19133% |
||
| 1518 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.15446% |
||
| 1519 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.12129% |
||
| 1520 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.09434% |
||
| 1521 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.07059% |
||
| 1522 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.049% |
||
| 1523 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.02832% |
||
| 1524 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.01008% |
||
| 1525 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 1.99346% |
||
| 1526 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 1.97873% |
||
| 1527 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 1.96472% |
||
| 1528 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.95156% |
||
| 1529 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.93798% |
||
| 1530 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 1.92585% |
||
| 1531 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 1.91519% |
||
| 1532 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.90461% |
||
| 1533 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.89497% |
||
| 1534 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.88575% |
||
| 1535 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.87652% |
||
| 1536 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.86723% |
||
| 1537 | |||
| 1538 | |||
| 1539 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1540 | |||
| 1541 | Correct predictions = 87.7% |
||
| 1542 | #FPplusFN=2089 |
||
| 1543 | minError=215 minErrorIndex=1 globalThreshold =-1.0194262346344 |
||
| 1544 | metrics area_roc = 92.07% |
||
| 1545 | (beta) metrics area_precision_recall = 73.34% |
||
| 1546 | |||
| 1547 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1548 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1549 | TOTAL: |
||
| 1550 | FN = 235 / 516 (truth == 1) & (prediction < threshold) |
||
| 1551 | TP = 281 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1552 | |||
| 1553 | FP = 22 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1554 | TN = 1,551 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1555 | |||
| 1556 | |||
| 1557 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 1558 | |||
| 1559 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1560 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1561 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1562 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1563 | Saved model file: ./models/model_hus250_hl2_time1524258725 |
||
| 1564 | |||
| 1565 | $$$ hidden_units = 275 hidden_layers = 2 $$$ |
||
| 1566 | XAVIER_INITIALIZATION = true |
||
| 1567 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.63413% |
||
| 1568 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.44791% |
||
| 1569 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.34129% |
||
| 1570 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.27245% |
||
| 1571 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.21519% |
||
| 1572 | completion: 24% (epoch=48)(element=6266) loss = 0.003 error progress = 2.17564% |
||
| 1573 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.13923% |
||
| 1574 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.10858% |
||
| 1575 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.08156% |
||
| 1576 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.06091% |
||
| 1577 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.04055% |
||
| 1578 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.02067% |
||
| 1579 | completion: 52% (epoch=104)(element=6266) loss = 0 error progress = 2.00133% |
||
| 1580 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 1.98548% |
||
| 1581 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 1.97029% |
||
| 1582 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 1.95536% |
||
| 1583 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.94224% |
||
| 1584 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.92949% |
||
| 1585 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 1.91747% |
||
| 1586 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.90701% |
||
| 1587 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.89661% |
||
| 1588 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.88706% |
||
| 1589 | completion: 92% (epoch=184)(element=6266) loss = 0 error progress = 1.87714% |
||
| 1590 | completion: 96% (epoch=192)(element=6266) loss = 0 error progress = 1.86721% |
||
| 1591 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.85854% |
||
| 1592 | |||
| 1593 | |||
| 1594 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1595 | |||
| 1596 | Correct predictions = 87.89% |
||
| 1597 | #FPplusFN=2089 |
||
| 1598 | minError=218 minErrorIndex=1 globalThreshold =-1.0311465456801 |
||
| 1599 | metrics area_roc = 91.55% |
||
| 1600 | (beta) metrics area_precision_recall = 72.69% |
||
| 1601 | |||
| 1602 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1603 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1604 | TOTAL: |
||
| 1605 | FN = 235 / 516 (truth == 1) & (prediction < threshold) |
||
| 1606 | TP = 281 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1607 | |||
| 1608 | FP = 18 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1609 | TN = 1,555 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1610 | |||
| 1611 | |||
| 1612 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 1613 | |||
| 1614 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1615 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1616 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1617 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1618 | Saved model file: ./models/model_hus275_hl2_time1524259422 |
||
| 1619 | |||
| 1620 | $$$ hidden_units = 300 hidden_layers = 2 $$$ |
||
| 1621 | XAVIER_INITIALIZATION = true |
||
| 1622 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.61997% |
||
| 1623 | completion: 8% (epoch=16)(element=6266) loss = 0.005 error progress = 2.43508% |
||
| 1624 | completion: 12% (epoch=24)(element=6266) loss = 0.007 error progress = 2.33374% |
||
| 1625 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.26226% |
||
| 1626 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.20663% |
||
| 1627 | completion: 24% (epoch=48)(element=6266) loss = 0.002 error progress = 2.16168% |
||
| 1628 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.12519% |
||
| 1629 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.0915% |
||
| 1630 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.06422% |
||
| 1631 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.03854% |
||
| 1632 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.01601% |
||
| 1633 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 1.9961% |
||
| 1634 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 1.97801% |
||
| 1635 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 1.95971% |
||
| 1636 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 1.94236% |
||
| 1637 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 1.92806% |
||
| 1638 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 1.91436% |
||
| 1639 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.90077% |
||
| 1640 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.88738% |
||
| 1641 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.87591% |
||
| 1642 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.86499% |
||
| 1643 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 1.85454% |
||
| 1644 | completion: 92% (epoch=184)(element=6266) loss = 0 error progress = 1.8459% |
||
| 1645 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.83667% |
||
| 1646 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.82728% |
||
| 1647 | |||
| 1648 | |||
| 1649 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1650 | |||
| 1651 | Correct predictions = 88.85% |
||
| 1652 | #FPplusFN=2089 |
||
| 1653 | minError=219 minErrorIndex=1 globalThreshold =-1.017091055818 |
||
| 1654 | metrics area_roc = 91.85% |
||
| 1655 | (beta) metrics area_precision_recall = 73.39% |
||
| 1656 | |||
| 1657 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1658 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1659 | TOTAL: |
||
| 1660 | FN = 195 / 516 (truth == 1) & (prediction < threshold) |
||
| 1661 | TP = 321 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1662 | |||
| 1663 | FP = 38 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1664 | TN = 1,535 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1665 | |||
| 1666 | |||
| 1667 | :::: Matthews correlation coefficient = +0.68 :::: |
||
| 1668 | |||
| 1669 | accuracy = 0.89 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1670 | recall = 0.62 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1671 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1672 | f1_score = 0.73 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1673 | Saved model file: ./models/model_hus300_hl2_time1524260213 |
||
| 1674 | |||
| 1675 | $$$ hidden_units = 350 hidden_layers = 2 $$$ |
||
| 1676 | XAVIER_INITIALIZATION = true |
||
| 1677 | completion: 4% (epoch=8)(element=6266) loss = 0.013 error progress = 2.57389% |
||
| 1678 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.40026% |
||
| 1679 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.31069% |
||
| 1680 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.24257% |
||
| 1681 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.19381% |
||
| 1682 | completion: 24% (epoch=48)(element=6266) loss = 0 error progress = 2.15316% |
||
| 1683 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.11944% |
||
| 1684 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.08903% |
||
| 1685 | completion: 36% (epoch=72)(element=6266) loss = 0.002 error progress = 2.06291% |
||
| 1686 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.03858% |
||
| 1687 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.01901% |
||
| 1688 | completion: 48% (epoch=96)(element=6266) loss = 0 error progress = 2.00015% |
||
| 1689 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 1.98225% |
||
| 1690 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 1.96571% |
||
| 1691 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 1.95127% |
||
| 1692 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.93696% |
||
| 1693 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.92263% |
||
| 1694 | completion: 72% (epoch=144)(element=6266) loss = 0 error progress = 1.91099% |
||
| 1695 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.89956% |
||
| 1696 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.88819% |
||
| 1697 | completion: 84% (epoch=168)(element=6266) loss = 0 error progress = 1.87813% |
||
| 1698 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.8676% |
||
| 1699 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.85733% |
||
| 1700 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 1.84753% |
||
| 1701 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.83874% |
||
| 1702 | |||
| 1703 | |||
| 1704 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1705 | |||
| 1706 | Correct predictions = 87.94% |
||
| 1707 | #FPplusFN=2089 |
||
| 1708 | minError=211 minErrorIndex=1 globalThreshold =-1.0106046791808 |
||
| 1709 | metrics area_roc = 92% |
||
| 1710 | (beta) metrics area_precision_recall = 73.57% |
||
| 1711 | |||
| 1712 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1713 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1714 | TOTAL: |
||
| 1715 | FN = 226 / 516 (truth == 1) & (prediction < threshold) |
||
| 1716 | TP = 290 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1717 | |||
| 1718 | FP = 26 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1719 | TN = 1,547 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1720 | |||
| 1721 | |||
| 1722 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 1723 | |||
| 1724 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1725 | recall = 0.56 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1726 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1727 | f1_score = 0.7 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1728 | Saved model file: ./models/model_hus350_hl2_time1524261188 |
||
| 1729 | |||
| 1730 | $$$ hidden_units = 400 hidden_layers = 2 $$$ |
||
| 1731 | XAVIER_INITIALIZATION = true |
||
| 1732 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.6091% |
||
| 1733 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.41582% |
||
| 1734 | completion: 12% (epoch=24)(element=6266) loss = 0.005 error progress = 2.31123% |
||
| 1735 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.24041% |
||
| 1736 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.18344% |
||
| 1737 | completion: 24% (epoch=48)(element=6266) loss = 0.004 error progress = 2.13937% |
||
| 1738 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.10181% |
||
| 1739 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.07128% |
||
| 1740 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.04267% |
||
| 1741 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.0192% |
||
| 1742 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 1.99643% |
||
| 1743 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 1.97499% |
||
| 1744 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 1.95502% |
||
| 1745 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 1.93743% |
||
| 1746 | completion: 60% (epoch=120)(element=6266) loss = 0 error progress = 1.92104% |
||
| 1747 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.90612% |
||
| 1748 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.89252% |
||
| 1749 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.88017% |
||
| 1750 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.86771% |
||
| 1751 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.85683% |
||
| 1752 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.84557% |
||
| 1753 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.83567% |
||
| 1754 | completion: 92% (epoch=184)(element=6266) loss = 0 error progress = 1.82568% |
||
| 1755 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.8171% |
||
| 1756 | completion: 100% (epoch=200)(element=6266) loss = 0 error progress = 1.80847% |
||
| 1757 | |||
| 1758 | |||
| 1759 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1760 | |||
| 1761 | Correct predictions = 88.42% |
||
| 1762 | #FPplusFN=2089 |
||
| 1763 | minError=208 minErrorIndex=1 globalThreshold =-1.0330131659432 |
||
| 1764 | metrics area_roc = 92.56% |
||
| 1765 | (beta) metrics area_precision_recall = 74.27% |
||
| 1766 | |||
| 1767 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1768 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1769 | TOTAL: |
||
| 1770 | FN = 219 / 516 (truth == 1) & (prediction < threshold) |
||
| 1771 | TP = 297 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1772 | |||
| 1773 | FP = 23 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1774 | TN = 1,550 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1775 | |||
| 1776 | |||
| 1777 | :::: Matthews correlation coefficient = +0.67 :::: |
||
| 1778 | |||
| 1779 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1780 | recall = 0.58 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1781 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1782 | f1_score = 0.71 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1783 | Saved model file: ./models/model_hus400_hl2_time1524262380 |
||
| 1784 | |||
| 1785 | $$$ hidden_units = 5 hidden_layers = 3 $$$ |
||
| 1786 | XAVIER_INITIALIZATION = true |
||
| 1787 | completion: 4% (epoch=8)(element=6266) loss = 0.097 error progress = 4.79103% |
||
| 1788 | completion: 8% (epoch=16)(element=6266) loss = 0.094 error progress = 4.75157% |
||
| 1789 | completion: 12% (epoch=24)(element=6266) loss = 0.106 error progress = 4.73539% |
||
| 1790 | completion: 16% (epoch=32)(element=6266) loss = 0.103 error progress = 4.72469% |
||
| 1791 | completion: 20% (epoch=40)(element=6266) loss = 0.097 error progress = 4.71573% |
||
| 1792 | completion: 24% (epoch=48)(element=6266) loss = 0.101 error progress = 4.70712% |
||
| 1793 | completion: 28% (epoch=56)(element=6266) loss = 0.097 error progress = 4.70138% |
||
| 1794 | completion: 32% (epoch=64)(element=6266) loss = 0.1 error progress = 4.69588% |
||
| 1795 | completion: 36% (epoch=72)(element=6266) loss = 0.026 error progress = 4.6924% |
||
| 1796 | completion: 40% (epoch=80)(element=6266) loss = 0.031 error progress = 4.68975% |
||
| 1797 | completion: 44% (epoch=88)(element=6266) loss = 0.1 error progress = 4.68748% |
||
| 1798 | completion: 48% (epoch=96)(element=6266) loss = 0.096 error progress = 4.68496% |
||
| 1799 | completion: 52% (epoch=104)(element=6266) loss = 0.102 error progress = 4.6831% |
||
| 1800 | completion: 56% (epoch=112)(element=6266) loss = 0.016 error progress = 4.68123% |
||
| 1801 | completion: 60% (epoch=120)(element=6266) loss = 0.095 error progress = 4.68015% |
||
| 1802 | completion: 64% (epoch=128)(element=6266) loss = 0.104 error progress = 4.6789% |
||
| 1803 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 4.67754% |
||
| 1804 | completion: 72% (epoch=144)(element=6266) loss = 0.099 error progress = 4.67641% |
||
| 1805 | completion: 76% (epoch=152)(element=6266) loss = 0.054 error progress = 4.67451% |
||
| 1806 | completion: 80% (epoch=160)(element=6266) loss = 0.093 error progress = 4.67313% |
||
| 1807 | completion: 84% (epoch=168)(element=6266) loss = 0.11 error progress = 4.67141% |
||
| 1808 | completion: 88% (epoch=176)(element=6266) loss = 0.117 error progress = 4.67013% |
||
| 1809 | completion: 92% (epoch=184)(element=6266) loss = 0.073 error progress = 4.66895% |
||
| 1810 | completion: 96% (epoch=192)(element=6266) loss = 0.02 error progress = 4.66718% |
||
| 1811 | completion: 100% (epoch=200)(element=6266) loss = 0.006 error progress = 4.66619% |
||
| 1812 | |||
| 1813 | |||
| 1814 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1815 | |||
| 1816 | Correct predictions = 75.3% |
||
| 1817 | ATTENTION: all the predictions are FALSE |
||
| 1818 | #FPplusFN=2089 |
||
| 1819 | minError=516 minErrorIndex=1 globalThreshold =-2.003358990258 |
||
| 1820 | metrics area_roc = 63.79% |
||
| 1821 | (beta) metrics area_precision_recall = 19.18% |
||
| 1822 | |||
| 1823 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1824 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1825 | TOTAL: |
||
| 1826 | FN = 516 / 516 (truth == 1) & (prediction < threshold) |
||
| 1827 | TP = 0 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1828 | |||
| 1829 | FP = 0 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1830 | TN = 1,573 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1831 | |||
| 1832 | Matthews correlation coefficient = NOT computable |
||
| 1833 | accuracy = 0.75 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1834 | recall = 0 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1835 | specificity = 1 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1836 | f1_score = 0 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1837 | Saved model file: ./models/model_hus5_hl3_time1524262620 |
||
| 1838 | |||
| 1839 | $$$ hidden_units = 10 hidden_layers = 3 $$$ |
||
| 1840 | XAVIER_INITIALIZATION = true |
||
| 1841 | completion: 4% (epoch=8)(element=6266) loss = 0.139 error progress = 4.53764% |
||
| 1842 | completion: 8% (epoch=16)(element=6266) loss = 0.065 error progress = 4.41591% |
||
| 1843 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 4.36185% |
||
| 1844 | completion: 16% (epoch=32)(element=6266) loss = 0.128 error progress = 4.32825% |
||
| 1845 | completion: 20% (epoch=40)(element=6266) loss = 0.018 error progress = 4.30085% |
||
| 1846 | completion: 24% (epoch=48)(element=6266) loss = 0.174 error progress = 4.28485% |
||
| 1847 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 4.27019% |
||
| 1848 | completion: 32% (epoch=64)(element=6266) loss = 0.111 error progress = 4.2547% |
||
| 1849 | completion: 36% (epoch=72)(element=6266) loss = 0.005 error progress = 4.24575% |
||
| 1850 | completion: 40% (epoch=80)(element=6266) loss = 0.004 error progress = 4.23679% |
||
| 1851 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 4.23062% |
||
| 1852 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 4.22343% |
||
| 1853 | completion: 52% (epoch=104)(element=6266) loss = 0.119 error progress = 4.21695% |
||
| 1854 | completion: 56% (epoch=112)(element=6266) loss = 0.033 error progress = 4.2112% |
||
| 1855 | completion: 60% (epoch=120)(element=6266) loss = 0.057 error progress = 4.20735% |
||
| 1856 | completion: 64% (epoch=128)(element=6266) loss = 0 error progress = 4.2037% |
||
| 1857 | completion: 68% (epoch=136)(element=6266) loss = 0.009 error progress = 4.2% |
||
| 1858 | completion: 72% (epoch=144)(element=6266) loss = 0.099 error progress = 4.19622% |
||
| 1859 | completion: 76% (epoch=152)(element=6266) loss = 0.042 error progress = 4.19291% |
||
| 1860 | completion: 80% (epoch=160)(element=6266) loss = 0.165 error progress = 4.19006% |
||
| 1861 | completion: 84% (epoch=168)(element=6266) loss = 0.026 error progress = 4.18764% |
||
| 1862 | completion: 88% (epoch=176)(element=6266) loss = 0.063 error progress = 4.18559% |
||
| 1863 | completion: 92% (epoch=184)(element=6266) loss = 0.013 error progress = 4.18391% |
||
| 1864 | completion: 96% (epoch=192)(element=6266) loss = 0.011 error progress = 4.18264% |
||
| 1865 | completion: 100% (epoch=200)(element=6266) loss = 0.033 error progress = 4.181% |
||
| 1866 | |||
| 1867 | |||
| 1868 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1869 | |||
| 1870 | Correct predictions = 75.3% |
||
| 1871 | ATTENTION: all the predictions are FALSE |
||
| 1872 | #FPplusFN=2089 |
||
| 1873 | minError=432 minErrorIndex=1 globalThreshold =-2.352214885995 |
||
| 1874 | metrics area_roc = 80.86% |
||
| 1875 | (beta) metrics area_precision_recall = 39.91% |
||
| 1876 | |||
| 1877 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1878 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1879 | TOTAL: |
||
| 1880 | FN = 516 / 516 (truth == 1) & (prediction < threshold) |
||
| 1881 | TP = 0 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1882 | |||
| 1883 | FP = 0 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1884 | TN = 1,573 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1885 | |||
| 1886 | Matthews correlation coefficient = NOT computable |
||
| 1887 | accuracy = 0.75 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1888 | recall = 0 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1889 | specificity = 1 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1890 | f1_score = 0 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1891 | Saved model file: ./models/model_hus10_hl3_time1524262862 |
||
| 1892 | |||
| 1893 | $$$ hidden_units = 25 hidden_layers = 3 $$$ |
||
| 1894 | XAVIER_INITIALIZATION = true |
||
| 1895 | completion: 4% (epoch=8)(element=6266) loss = 0.018 error progress = 3.73497% |
||
| 1896 | completion: 8% (epoch=16)(element=6266) loss = 0.028 error progress = 3.58197% |
||
| 1897 | completion: 12% (epoch=24)(element=6266) loss = 0.005 error progress = 3.51624% |
||
| 1898 | completion: 16% (epoch=32)(element=6266) loss = 0.054 error progress = 3.46591% |
||
| 1899 | completion: 20% (epoch=40)(element=6266) loss = 0.055 error progress = 3.43517% |
||
| 1900 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 3.40813% |
||
| 1901 | completion: 28% (epoch=56)(element=6266) loss = 0.01 error progress = 3.38517% |
||
| 1902 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 3.36869% |
||
| 1903 | completion: 36% (epoch=72)(element=6266) loss = 0.014 error progress = 3.35278% |
||
| 1904 | completion: 40% (epoch=80)(element=6266) loss = 0.141 error progress = 3.33865% |
||
| 1905 | completion: 44% (epoch=88)(element=6266) loss = 0.002 error progress = 3.32434% |
||
| 1906 | completion: 48% (epoch=96)(element=6266) loss = 0.021 error progress = 3.30545% |
||
| 1907 | completion: 52% (epoch=104)(element=6266) loss = 0.003 error progress = 3.28529% |
||
| 1908 | completion: 56% (epoch=112)(element=6266) loss = 0 error progress = 3.26491% |
||
| 1909 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 3.24494% |
||
| 1910 | completion: 64% (epoch=128)(element=6266) loss = 0.01 error progress = 3.23062% |
||
| 1911 | completion: 68% (epoch=136)(element=6266) loss = 0.013 error progress = 3.21858% |
||
| 1912 | completion: 72% (epoch=144)(element=6266) loss = 0.01 error progress = 3.2076% |
||
| 1913 | completion: 76% (epoch=152)(element=6266) loss = 0.006 error progress = 3.19886% |
||
| 1914 | completion: 80% (epoch=160)(element=6266) loss = 0.011 error progress = 3.19058% |
||
| 1915 | completion: 84% (epoch=168)(element=6266) loss = 0.013 error progress = 3.18646% |
||
| 1916 | completion: 88% (epoch=176)(element=6266) loss = 0.013 error progress = 3.18054% |
||
| 1917 | completion: 92% (epoch=184)(element=6266) loss = 0.012 error progress = 3.17514% |
||
| 1918 | completion: 96% (epoch=192)(element=6266) loss = 0.01 error progress = 3.17138% |
||
| 1919 | completion: 100% (epoch=200)(element=6266) loss = 0.02 error progress = 3.1681% |
||
| 1920 | |||
| 1921 | |||
| 1922 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1923 | |||
| 1924 | Correct predictions = 80.61% |
||
| 1925 | #FPplusFN=2089 |
||
| 1926 | minError=299 minErrorIndex=1 globalThreshold =-0.7214847620649 |
||
| 1927 | metrics area_roc = 83.9% |
||
| 1928 | (beta) metrics area_precision_recall = 57.81% |
||
| 1929 | |||
| 1930 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1931 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1932 | TOTAL: |
||
| 1933 | FN = 368 / 516 (truth == 1) & (prediction < threshold) |
||
| 1934 | TP = 148 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1935 | |||
| 1936 | FP = 37 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1937 | TN = 1,536 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1938 | |||
| 1939 | |||
| 1940 | :::: Matthews correlation coefficient = +0.4 :::: |
||
| 1941 | |||
| 1942 | accuracy = 0.81 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1943 | recall = 0.29 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1944 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 1945 | f1_score = 0.42 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 1946 | Saved model file: ./models/model_hus25_hl3_time1524263117 |
||
| 1947 | |||
| 1948 | $$$ hidden_units = 50 hidden_layers = 3 $$$ |
||
| 1949 | XAVIER_INITIALIZATION = true |
||
| 1950 | completion: 4% (epoch=8)(element=6266) loss = 0.006 error progress = 3.24003% |
||
| 1951 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 3.03717% |
||
| 1952 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.95022% |
||
| 1953 | completion: 16% (epoch=32)(element=6266) loss = 0.013 error progress = 2.88729% |
||
| 1954 | completion: 20% (epoch=40)(element=6266) loss = 0.038 error progress = 2.84024% |
||
| 1955 | completion: 24% (epoch=48)(element=6266) loss = 0.009 error progress = 2.80457% |
||
| 1956 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.78231% |
||
| 1957 | completion: 32% (epoch=64)(element=6266) loss = 0.004 error progress = 2.76122% |
||
| 1958 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.74328% |
||
| 1959 | completion: 40% (epoch=80)(element=6266) loss = 0.015 error progress = 2.72724% |
||
| 1960 | completion: 44% (epoch=88)(element=6266) loss = 0.005 error progress = 2.71181% |
||
| 1961 | completion: 48% (epoch=96)(element=6266) loss = 0.162 error progress = 2.69936% |
||
| 1962 | completion: 52% (epoch=104)(element=6266) loss = 0.053 error progress = 2.69037% |
||
| 1963 | completion: 56% (epoch=112)(element=6266) loss = 0.057 error progress = 2.68078% |
||
| 1964 | completion: 60% (epoch=120)(element=6266) loss = 0.031 error progress = 2.67019% |
||
| 1965 | completion: 64% (epoch=128)(element=6266) loss = 0.004 error progress = 2.6617% |
||
| 1966 | completion: 68% (epoch=136)(element=6266) loss = 0.041 error progress = 2.65503% |
||
| 1967 | completion: 72% (epoch=144)(element=6266) loss = 0.003 error progress = 2.64614% |
||
| 1968 | completion: 76% (epoch=152)(element=6266) loss = 0.007 error progress = 2.63893% |
||
| 1969 | completion: 80% (epoch=160)(element=6266) loss = 0.015 error progress = 2.63219% |
||
| 1970 | completion: 84% (epoch=168)(element=6266) loss = 0.004 error progress = 2.62492% |
||
| 1971 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 2.61791% |
||
| 1972 | completion: 92% (epoch=184)(element=6266) loss = 0.01 error progress = 2.61215% |
||
| 1973 | completion: 96% (epoch=192)(element=6266) loss = 0.012 error progress = 2.60712% |
||
| 1974 | completion: 100% (epoch=200)(element=6266) loss = 0.007 error progress = 2.60264% |
||
| 1975 | |||
| 1976 | |||
| 1977 | ### executeTest(perceptron, validation_patient_profile) |
||
| 1978 | |||
| 1979 | Correct predictions = 83.01% |
||
| 1980 | #FPplusFN=2089 |
||
| 1981 | minError=270 minErrorIndex=1 globalThreshold =-1.4297087610735 |
||
| 1982 | metrics area_roc = 88.61% |
||
| 1983 | (beta) metrics area_precision_recall = 64.73% |
||
| 1984 | |||
| 1985 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 1986 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 1987 | TOTAL: |
||
| 1988 | FN = 337 / 516 (truth == 1) & (prediction < threshold) |
||
| 1989 | TP = 179 / 516 (truth == 1) & (prediction >= threshold) |
||
| 1990 | |||
| 1991 | FP = 18 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 1992 | TN = 1,555 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 1993 | |||
| 1994 | |||
| 1995 | :::: Matthews correlation coefficient = +0.5 :::: |
||
| 1996 | |||
| 1997 | accuracy = 0.83 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 1998 | recall = 0.35 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 1999 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2000 | f1_score = 0.5 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2001 | Saved model file: ./models/model_hus50_hl3_time1524263399 |
||
| 2002 | |||
| 2003 | $$$ hidden_units = 75 hidden_layers = 3 $$$ |
||
| 2004 | XAVIER_INITIALIZATION = true |
||
| 2005 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 3.07514% |
||
| 2006 | completion: 8% (epoch=16)(element=6266) loss = 0.022 error progress = 2.84448% |
||
| 2007 | completion: 12% (epoch=24)(element=6266) loss = 0.007 error progress = 2.73171% |
||
| 2008 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.64871% |
||
| 2009 | completion: 20% (epoch=40)(element=6266) loss = 0.004 error progress = 2.59849% |
||
| 2010 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.54858% |
||
| 2011 | completion: 28% (epoch=56)(element=6266) loss = 0.004 error progress = 2.51013% |
||
| 2012 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.47865% |
||
| 2013 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.44776% |
||
| 2014 | completion: 40% (epoch=80)(element=6266) loss = 0.003 error progress = 2.42344% |
||
| 2015 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.40241% |
||
| 2016 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.38561% |
||
| 2017 | completion: 52% (epoch=104)(element=6266) loss = 0.003 error progress = 2.36977% |
||
| 2018 | completion: 56% (epoch=112)(element=6266) loss = 0.005 error progress = 2.35461% |
||
| 2019 | completion: 60% (epoch=120)(element=6266) loss = 0.003 error progress = 2.34042% |
||
| 2020 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.32635% |
||
| 2021 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.31238% |
||
| 2022 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.29978% |
||
| 2023 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.28834% |
||
| 2024 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.27866% |
||
| 2025 | completion: 84% (epoch=168)(element=6266) loss = 0.003 error progress = 2.26839% |
||
| 2026 | completion: 88% (epoch=176)(element=6266) loss = 0.003 error progress = 2.25931% |
||
| 2027 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 2.25035% |
||
| 2028 | completion: 96% (epoch=192)(element=6266) loss = 0.003 error progress = 2.24282% |
||
| 2029 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 2.23435% |
||
| 2030 | |||
| 2031 | |||
| 2032 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2033 | |||
| 2034 | Correct predictions = 85.4% |
||
| 2035 | #FPplusFN=2089 |
||
| 2036 | minError=242 minErrorIndex=1 globalThreshold =-1.0476497787304 |
||
| 2037 | metrics area_roc = 90.79% |
||
| 2038 | (beta) metrics area_precision_recall = 69.05% |
||
| 2039 | |||
| 2040 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2041 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2042 | TOTAL: |
||
| 2043 | FN = 276 / 516 (truth == 1) & (prediction < threshold) |
||
| 2044 | TP = 240 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2045 | |||
| 2046 | FP = 29 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2047 | TN = 1,544 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2048 | |||
| 2049 | |||
| 2050 | :::: Matthews correlation coefficient = +0.58 :::: |
||
| 2051 | |||
| 2052 | accuracy = 0.85 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2053 | recall = 0.47 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2054 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2055 | f1_score = 0.61 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2056 | Saved model file: ./models/model_hus75_hl3_time1524263715 |
||
| 2057 | |||
| 2058 | $$$ hidden_units = 100 hidden_layers = 3 $$$ |
||
| 2059 | XAVIER_INITIALIZATION = true |
||
| 2060 | completion: 4% (epoch=8)(element=6266) loss = 0.009 error progress = 3.06982% |
||
| 2061 | completion: 8% (epoch=16)(element=6266) loss = 0.003 error progress = 2.8466% |
||
| 2062 | completion: 12% (epoch=24)(element=6266) loss = 0.002 error progress = 2.73071% |
||
| 2063 | completion: 16% (epoch=32)(element=6266) loss = 0.003 error progress = 2.6449% |
||
| 2064 | completion: 20% (epoch=40)(element=6266) loss = 0.004 error progress = 2.57996% |
||
| 2065 | completion: 24% (epoch=48)(element=6266) loss = 0.004 error progress = 2.52773% |
||
| 2066 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.48332% |
||
| 2067 | completion: 32% (epoch=64)(element=6266) loss = 0.003 error progress = 2.4461% |
||
| 2068 | completion: 36% (epoch=72)(element=6266) loss = 0.003 error progress = 2.41488% |
||
| 2069 | completion: 40% (epoch=80)(element=6266) loss = 0.003 error progress = 2.39157% |
||
| 2070 | completion: 44% (epoch=88)(element=6266) loss = 0.004 error progress = 2.3682% |
||
| 2071 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.34769% |
||
| 2072 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.32844% |
||
| 2073 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.30927% |
||
| 2074 | completion: 60% (epoch=120)(element=6266) loss = 0.003 error progress = 2.29284% |
||
| 2075 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.27654% |
||
| 2076 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.26175% |
||
| 2077 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.24884% |
||
| 2078 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.23548% |
||
| 2079 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.22362% |
||
| 2080 | completion: 84% (epoch=168)(element=6266) loss = 0.003 error progress = 2.21218% |
||
| 2081 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 2.20288% |
||
| 2082 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 2.1936% |
||
| 2083 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 2.18543% |
||
| 2084 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 2.17626% |
||
| 2085 | |||
| 2086 | |||
| 2087 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2088 | |||
| 2089 | Correct predictions = 87.03% |
||
| 2090 | #FPplusFN=2089 |
||
| 2091 | minError=233 minErrorIndex=1 globalThreshold =-1.0665833440966 |
||
| 2092 | metrics area_roc = 90.91% |
||
| 2093 | (beta) metrics area_precision_recall = 53.05% |
||
| 2094 | |||
| 2095 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2096 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2097 | TOTAL: |
||
| 2098 | FN = 235 / 516 (truth == 1) & (prediction < threshold) |
||
| 2099 | TP = 281 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2100 | |||
| 2101 | FP = 36 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2102 | TN = 1,537 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2103 | |||
| 2104 | |||
| 2105 | :::: Matthews correlation coefficient = +0.63 :::: |
||
| 2106 | |||
| 2107 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2108 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2109 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2110 | f1_score = 0.67 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2111 | Saved model file: ./models/model_hus100_hl3_time1524264078 |
||
| 2112 | |||
| 2113 | $$$ hidden_units = 125 hidden_layers = 3 $$$ |
||
| 2114 | XAVIER_INITIALIZATION = true |
||
| 2115 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.94695% |
||
| 2116 | completion: 8% (epoch=16)(element=6266) loss = 0.004 error progress = 2.72138% |
||
| 2117 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.60357% |
||
| 2118 | completion: 16% (epoch=32)(element=6266) loss = 0.004 error progress = 2.52799% |
||
| 2119 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.4695% |
||
| 2120 | completion: 24% (epoch=48)(element=6266) loss = 0.003 error progress = 2.42557% |
||
| 2121 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.39077% |
||
| 2122 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.35897% |
||
| 2123 | completion: 36% (epoch=72)(element=6266) loss = 0 error progress = 2.33082% |
||
| 2124 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.30967% |
||
| 2125 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.28855% |
||
| 2126 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.27076% |
||
| 2127 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.25482% |
||
| 2128 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 2.24018% |
||
| 2129 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.22529% |
||
| 2130 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.21323% |
||
| 2131 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.20346% |
||
| 2132 | completion: 72% (epoch=144)(element=6266) loss = 0.002 error progress = 2.19542% |
||
| 2133 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.18737% |
||
| 2134 | completion: 80% (epoch=160)(element=6266) loss = 0.003 error progress = 2.17906% |
||
| 2135 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 2.17066% |
||
| 2136 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 2.16202% |
||
| 2137 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 2.15546% |
||
| 2138 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 2.14796% |
||
| 2139 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 2.14062% |
||
| 2140 | |||
| 2141 | |||
| 2142 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2143 | |||
| 2144 | Correct predictions = 87.27% |
||
| 2145 | #FPplusFN=2089 |
||
| 2146 | minError=226 minErrorIndex=1 globalThreshold =-0.96243208057981 |
||
| 2147 | metrics area_roc = 91.38% |
||
| 2148 | (beta) metrics area_precision_recall = 70.07% |
||
| 2149 | |||
| 2150 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2151 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2152 | TOTAL: |
||
| 2153 | FN = 226 / 516 (truth == 1) & (prediction < threshold) |
||
| 2154 | TP = 290 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2155 | |||
| 2156 | FP = 40 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2157 | TN = 1,533 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2158 | |||
| 2159 | |||
| 2160 | :::: Matthews correlation coefficient = +0.63 :::: |
||
| 2161 | |||
| 2162 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2163 | recall = 0.56 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2164 | specificity = 0.97 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2165 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2166 | Saved model file: ./models/model_hus125_hl3_time1524264498 |
||
| 2167 | |||
| 2168 | $$$ hidden_units = 150 hidden_layers = 3 $$$ |
||
| 2169 | XAVIER_INITIALIZATION = true |
||
| 2170 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.90434% |
||
| 2171 | completion: 8% (epoch=16)(element=6266) loss = 0.005 error progress = 2.66751% |
||
| 2172 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.54358% |
||
| 2173 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.46205% |
||
| 2174 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.39917% |
||
| 2175 | completion: 24% (epoch=48)(element=6266) loss = 0.002 error progress = 2.35561% |
||
| 2176 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.31771% |
||
| 2177 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.28721% |
||
| 2178 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.25745% |
||
| 2179 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.23582% |
||
| 2180 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.21617% |
||
| 2181 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.19641% |
||
| 2182 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.17939% |
||
| 2183 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.16453% |
||
| 2184 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.15127% |
||
| 2185 | completion: 64% (epoch=128)(element=6266) loss = 0.002 error progress = 2.13752% |
||
| 2186 | completion: 68% (epoch=136)(element=6266) loss = 0.002 error progress = 2.12511% |
||
| 2187 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.11399% |
||
| 2188 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.10416% |
||
| 2189 | completion: 80% (epoch=160)(element=6266) loss = 0.003 error progress = 2.0931% |
||
| 2190 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 2.08274% |
||
| 2191 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 2.07332% |
||
| 2192 | completion: 92% (epoch=184)(element=6266) loss = 0.003 error progress = 2.06428% |
||
| 2193 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 2.05589% |
||
| 2194 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 2.04895% |
||
| 2195 | |||
| 2196 | |||
| 2197 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2198 | |||
| 2199 | Correct predictions = 86.79% |
||
| 2200 | #FPplusFN=2089 |
||
| 2201 | minError=246 minErrorIndex=1 globalThreshold =-0.98084638731507 |
||
| 2202 | metrics area_roc = 90.4% |
||
| 2203 | (beta) metrics area_precision_recall = 64.03% |
||
| 2204 | |||
| 2205 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2206 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2207 | TOTAL: |
||
| 2208 | FN = 195 / 516 (truth == 1) & (prediction < threshold) |
||
| 2209 | TP = 321 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2210 | |||
| 2211 | FP = 81 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2212 | TN = 1,492 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2213 | |||
| 2214 | |||
| 2215 | :::: Matthews correlation coefficient = +0.62 :::: |
||
| 2216 | |||
| 2217 | accuracy = 0.87 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2218 | recall = 0.62 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2219 | specificity = 0.95 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2220 | f1_score = 0.7 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2221 | Saved model file: ./models/model_hus150_hl3_time1524264987 |
||
| 2222 | |||
| 2223 | $$$ hidden_units = 175 hidden_layers = 3 $$$ |
||
| 2224 | XAVIER_INITIALIZATION = true |
||
| 2225 | completion: 4% (epoch=8)(element=6266) loss = 0.003 error progress = 2.83639% |
||
| 2226 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.61532% |
||
| 2227 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.49333% |
||
| 2228 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.41815% |
||
| 2229 | completion: 20% (epoch=40)(element=6266) loss = 0.004 error progress = 2.35554% |
||
| 2230 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.31191% |
||
| 2231 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.27602% |
||
| 2232 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.24633% |
||
| 2233 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.22007% |
||
| 2234 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.19709% |
||
| 2235 | completion: 44% (epoch=88)(element=6266) loss = 0.002 error progress = 2.17522% |
||
| 2236 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.15725% |
||
| 2237 | completion: 52% (epoch=104)(element=6266) loss = 0.002 error progress = 2.13838% |
||
| 2238 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 2.12146% |
||
| 2239 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.1067% |
||
| 2240 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.09373% |
||
| 2241 | completion: 68% (epoch=136)(element=6266) loss = 0.002 error progress = 2.08121% |
||
| 2242 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.06809% |
||
| 2243 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.05586% |
||
| 2244 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.04393% |
||
| 2245 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 2.03374% |
||
| 2246 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 2.02399% |
||
| 2247 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 2.01583% |
||
| 2248 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 2.00805% |
||
| 2249 | completion: 100% (epoch=200)(element=6266) loss = 0.012 error progress = 1.99931% |
||
| 2250 | |||
| 2251 | |||
| 2252 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2253 | |||
| 2254 | Correct predictions = 88.46% |
||
| 2255 | #FPplusFN=2089 |
||
| 2256 | minError=215 minErrorIndex=1 globalThreshold =-1.0256556658434 |
||
| 2257 | metrics area_roc = 91.6% |
||
| 2258 | (beta) metrics area_precision_recall = 71.45% |
||
| 2259 | |||
| 2260 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2261 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2262 | TOTAL: |
||
| 2263 | FN = 208 / 516 (truth == 1) & (prediction < threshold) |
||
| 2264 | TP = 308 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2265 | |||
| 2266 | FP = 33 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2267 | TN = 1,540 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2268 | |||
| 2269 | |||
| 2270 | :::: Matthews correlation coefficient = +0.67 :::: |
||
| 2271 | |||
| 2272 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2273 | recall = 0.6 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2274 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2275 | f1_score = 0.72 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2276 | Saved model file: ./models/model_hus175_hl3_time1524265554 |
||
| 2277 | |||
| 2278 | $$$ hidden_units = 200 hidden_layers = 3 $$$ |
||
| 2279 | XAVIER_INITIALIZATION = true |
||
| 2280 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.78163% |
||
| 2281 | completion: 8% (epoch=16)(element=6266) loss = 0 error progress = 2.57817% |
||
| 2282 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.47021% |
||
| 2283 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.39202% |
||
| 2284 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.338% |
||
| 2285 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.29533% |
||
| 2286 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.26099% |
||
| 2287 | completion: 32% (epoch=64)(element=6266) loss = 0.004 error progress = 2.22939% |
||
| 2288 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.2019% |
||
| 2289 | completion: 40% (epoch=80)(element=6266) loss = 0 error progress = 2.17782% |
||
| 2290 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.15789% |
||
| 2291 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.14049% |
||
| 2292 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.12568% |
||
| 2293 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.11119% |
||
| 2294 | completion: 60% (epoch=120)(element=6266) loss = 0.003 error progress = 2.09722% |
||
| 2295 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.08295% |
||
| 2296 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 2.07194% |
||
| 2297 | completion: 72% (epoch=144)(element=6266) loss = 0.002 error progress = 2.0611% |
||
| 2298 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.05023% |
||
| 2299 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 2.03968% |
||
| 2300 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 2.02985% |
||
| 2301 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 2.02116% |
||
| 2302 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 2.01301% |
||
| 2303 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 2.00619% |
||
| 2304 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.99722% |
||
| 2305 | |||
| 2306 | |||
| 2307 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2308 | |||
| 2309 | Correct predictions = 87.7% |
||
| 2310 | #FPplusFN=2089 |
||
| 2311 | minError=236 minErrorIndex=1 globalThreshold =-1.0497762131032 |
||
| 2312 | metrics area_roc = 91.61% |
||
| 2313 | (beta) metrics area_precision_recall = 70.14% |
||
| 2314 | |||
| 2315 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2316 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2317 | TOTAL: |
||
| 2318 | FN = 226 / 516 (truth == 1) & (prediction < threshold) |
||
| 2319 | TP = 290 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2320 | |||
| 2321 | FP = 31 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2322 | TN = 1,542 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2323 | |||
| 2324 | |||
| 2325 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 2326 | |||
| 2327 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2328 | recall = 0.56 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2329 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2330 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2331 | Saved model file: ./models/model_hus200_hl3_time1524266211 |
||
| 2332 | |||
| 2333 | $$$ hidden_units = 225 hidden_layers = 3 $$$ |
||
| 2334 | XAVIER_INITIALIZATION = true |
||
| 2335 | completion: 4% (epoch=8)(element=6266) loss = 0.003 error progress = 2.7849% |
||
| 2336 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.57778% |
||
| 2337 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.47073% |
||
| 2338 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.39026% |
||
| 2339 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.33268% |
||
| 2340 | completion: 24% (epoch=48)(element=6266) loss = 0.004 error progress = 2.28583% |
||
| 2341 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.24638% |
||
| 2342 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.21161% |
||
| 2343 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.1839% |
||
| 2344 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.15825% |
||
| 2345 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.13485% |
||
| 2346 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.11541% |
||
| 2347 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.09672% |
||
| 2348 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 2.07948% |
||
| 2349 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.06157% |
||
| 2350 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.04581% |
||
| 2351 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 2.03243% |
||
| 2352 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.01998% |
||
| 2353 | completion: 76% (epoch=152)(element=6266) loss = 0.002 error progress = 2.00837% |
||
| 2354 | completion: 80% (epoch=160)(element=6266) loss = 0.003 error progress = 1.99675% |
||
| 2355 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.98605% |
||
| 2356 | completion: 88% (epoch=176)(element=6266) loss = 0 error progress = 1.97531% |
||
| 2357 | completion: 92% (epoch=184)(element=6266) loss = 0.002 error progress = 1.96631% |
||
| 2358 | completion: 96% (epoch=192)(element=6266) loss = 0.002 error progress = 1.95698% |
||
| 2359 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.94917% |
||
| 2360 | |||
| 2361 | |||
| 2362 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2363 | |||
| 2364 | Correct predictions = 88.42% |
||
| 2365 | #FPplusFN=2089 |
||
| 2366 | minError=218 minErrorIndex=1 globalThreshold =-1.0389312956868 |
||
| 2367 | metrics area_roc = 91.79% |
||
| 2368 | (beta) metrics area_precision_recall = 71.16% |
||
| 2369 | |||
| 2370 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2371 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2372 | TOTAL: |
||
| 2373 | FN = 206 / 516 (truth == 1) & (prediction < threshold) |
||
| 2374 | TP = 310 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2375 | |||
| 2376 | FP = 36 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2377 | TN = 1,537 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2378 | |||
| 2379 | |||
| 2380 | :::: Matthews correlation coefficient = +0.67 :::: |
||
| 2381 | |||
| 2382 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2383 | recall = 0.6 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2384 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2385 | f1_score = 0.72 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2386 | Saved model file: ./models/model_hus225_hl3_time1524266965 |
||
| 2387 | |||
| 2388 | $$$ hidden_units = 250 hidden_layers = 3 $$$ |
||
| 2389 | XAVIER_INITIALIZATION = true |
||
| 2390 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.77222% |
||
| 2391 | completion: 8% (epoch=16)(element=6266) loss = 0.007 error progress = 2.55304% |
||
| 2392 | completion: 12% (epoch=24)(element=6266) loss = 0.003 error progress = 2.43794% |
||
| 2393 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.36492% |
||
| 2394 | completion: 20% (epoch=40)(element=6266) loss = 0.003 error progress = 2.30781% |
||
| 2395 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.26313% |
||
| 2396 | completion: 28% (epoch=56)(element=6266) loss = 0.002 error progress = 2.22635% |
||
| 2397 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.19152% |
||
| 2398 | completion: 36% (epoch=72)(element=6266) loss = 0.004 error progress = 2.1636% |
||
| 2399 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.13677% |
||
| 2400 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.11342% |
||
| 2401 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.09236% |
||
| 2402 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.07503% |
||
| 2403 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.0577% |
||
| 2404 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.04436% |
||
| 2405 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.02858% |
||
| 2406 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 2.01524% |
||
| 2407 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 2.00217% |
||
| 2408 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.99019% |
||
| 2409 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.97984% |
||
| 2410 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 1.96944% |
||
| 2411 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.96053% |
||
| 2412 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.95149% |
||
| 2413 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.94318% |
||
| 2414 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.93554% |
||
| 2415 | |||
| 2416 | |||
| 2417 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2418 | |||
| 2419 | Correct predictions = 88.22% |
||
| 2420 | #FPplusFN=2089 |
||
| 2421 | minError=213 minErrorIndex=1 globalThreshold =-0.99025144958357 |
||
| 2422 | metrics area_roc = 91.82% |
||
| 2423 | (beta) metrics area_precision_recall = 72.21% |
||
| 2424 | |||
| 2425 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2426 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2427 | TOTAL: |
||
| 2428 | FN = 216 / 516 (truth == 1) & (prediction < threshold) |
||
| 2429 | TP = 300 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2430 | |||
| 2431 | FP = 30 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2432 | TN = 1,543 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2433 | |||
| 2434 | |||
| 2435 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 2436 | |||
| 2437 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2438 | recall = 0.58 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2439 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2440 | f1_score = 0.71 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2441 | Saved model file: ./models/model_hus250_hl3_time1524267815 |
||
| 2442 | |||
| 2443 | $$$ hidden_units = 275 hidden_layers = 3 $$$ |
||
| 2444 | XAVIER_INITIALIZATION = true |
||
| 2445 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.7596% |
||
| 2446 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.54255% |
||
| 2447 | completion: 12% (epoch=24)(element=6266) loss = 0 error progress = 2.42405% |
||
| 2448 | completion: 16% (epoch=32)(element=6266) loss = 0.002 error progress = 2.34219% |
||
| 2449 | completion: 20% (epoch=40)(element=6266) loss = 0.001 error progress = 2.28179% |
||
| 2450 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.2334% |
||
| 2451 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.19553% |
||
| 2452 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.16166% |
||
| 2453 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.13359% |
||
| 2454 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.10988% |
||
| 2455 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.09108% |
||
| 2456 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.07101% |
||
| 2457 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.05132% |
||
| 2458 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.03298% |
||
| 2459 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.01594% |
||
| 2460 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 2.00309% |
||
| 2461 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.99028% |
||
| 2462 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.9781% |
||
| 2463 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.96705% |
||
| 2464 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.95667% |
||
| 2465 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.94686% |
||
| 2466 | completion: 88% (epoch=176)(element=6266) loss = 0.002 error progress = 1.93692% |
||
| 2467 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.92756% |
||
| 2468 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.91848% |
||
| 2469 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 1.91017% |
||
| 2470 | |||
| 2471 | |||
| 2472 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2473 | |||
| 2474 | Correct predictions = 87.89% |
||
| 2475 | #FPplusFN=2089 |
||
| 2476 | minError=223 minErrorIndex=1 globalThreshold =-0.95773665364595 |
||
| 2477 | metrics area_roc = 91.38% |
||
| 2478 | (beta) metrics area_precision_recall = 54.69% |
||
| 2479 | |||
| 2480 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2481 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2482 | TOTAL: |
||
| 2483 | FN = 229 / 516 (truth == 1) & (prediction < threshold) |
||
| 2484 | TP = 287 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2485 | |||
| 2486 | FP = 24 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2487 | TN = 1,549 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2488 | |||
| 2489 | |||
| 2490 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 2491 | |||
| 2492 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2493 | recall = 0.56 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2494 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2495 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2496 | Saved model file: ./models/model_hus275_hl3_time1524268770 |
||
| 2497 | |||
| 2498 | $$$ hidden_units = 300 hidden_layers = 3 $$$ |
||
| 2499 | XAVIER_INITIALIZATION = true |
||
| 2500 | completion: 4% (epoch=8)(element=6266) loss = 0 error progress = 2.70924% |
||
| 2501 | completion: 8% (epoch=16)(element=6266) loss = 0.001 error progress = 2.50558% |
||
| 2502 | completion: 12% (epoch=24)(element=6266) loss = 0.003 error progress = 2.39151% |
||
| 2503 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.3187% |
||
| 2504 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.26602% |
||
| 2505 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.21984% |
||
| 2506 | completion: 28% (epoch=56)(element=6266) loss = 0 error progress = 2.18322% |
||
| 2507 | completion: 32% (epoch=64)(element=6266) loss = 0 error progress = 2.14949% |
||
| 2508 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.12147% |
||
| 2509 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.09742% |
||
| 2510 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.0753% |
||
| 2511 | completion: 48% (epoch=96)(element=6266) loss = 0.003 error progress = 2.05625% |
||
| 2512 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.03731% |
||
| 2513 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.01928% |
||
| 2514 | completion: 60% (epoch=120)(element=6266) loss = 0.002 error progress = 2.0028% |
||
| 2515 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.98783% |
||
| 2516 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.97498% |
||
| 2517 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.96154% |
||
| 2518 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.95104% |
||
| 2519 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 1.9406% |
||
| 2520 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.93009% |
||
| 2521 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.92179% |
||
| 2522 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.91304% |
||
| 2523 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.90419% |
||
| 2524 | completion: 100% (epoch=200)(element=6266) loss = 0.002 error progress = 1.89545% |
||
| 2525 | |||
| 2526 | |||
| 2527 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2528 | |||
| 2529 | Correct predictions = 87.65% |
||
| 2530 | #FPplusFN=2089 |
||
| 2531 | minError=214 minErrorIndex=1 globalThreshold =-1.0372542695559 |
||
| 2532 | metrics area_roc = 91.65% |
||
| 2533 | (beta) metrics area_precision_recall = 73.77% |
||
| 2534 | |||
| 2535 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2536 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2537 | TOTAL: |
||
| 2538 | FN = 242 / 516 (truth == 1) & (prediction < threshold) |
||
| 2539 | TP = 274 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2540 | |||
| 2541 | FP = 16 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2542 | TN = 1,557 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2543 | |||
| 2544 | |||
| 2545 | :::: Matthews correlation coefficient = +0.65 :::: |
||
| 2546 | |||
| 2547 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2548 | recall = 0.53 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2549 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2550 | f1_score = 0.68 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2551 | Saved model file: ./models/model_hus300_hl3_time1524269864 |
||
| 2552 | |||
| 2553 | $$$ hidden_units = 350 hidden_layers = 3 $$$ |
||
| 2554 | XAVIER_INITIALIZATION = true |
||
| 2555 | completion: 4% (epoch=8)(element=6266) loss = 0.001 error progress = 2.73248% |
||
| 2556 | completion: 8% (epoch=16)(element=6266) loss = 0.004 error progress = 2.50847% |
||
| 2557 | completion: 12% (epoch=24)(element=6266) loss = 0.001 error progress = 2.38995% |
||
| 2558 | completion: 16% (epoch=32)(element=6266) loss = 0 error progress = 2.31336% |
||
| 2559 | completion: 20% (epoch=40)(element=6266) loss = 0.002 error progress = 2.25972% |
||
| 2560 | completion: 24% (epoch=48)(element=6266) loss = 0.001 error progress = 2.21614% |
||
| 2561 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.17799% |
||
| 2562 | completion: 32% (epoch=64)(element=6266) loss = 0.001 error progress = 2.14636% |
||
| 2563 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.1192% |
||
| 2564 | completion: 40% (epoch=80)(element=6266) loss = 0.001 error progress = 2.09443% |
||
| 2565 | completion: 44% (epoch=88)(element=6266) loss = 0.001 error progress = 2.07251% |
||
| 2566 | completion: 48% (epoch=96)(element=6266) loss = 0.002 error progress = 2.05475% |
||
| 2567 | completion: 52% (epoch=104)(element=6266) loss = 0.001 error progress = 2.03756% |
||
| 2568 | completion: 56% (epoch=112)(element=6266) loss = 0.001 error progress = 2.02034% |
||
| 2569 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 2.00424% |
||
| 2570 | completion: 64% (epoch=128)(element=6266) loss = 0 error progress = 1.98998% |
||
| 2571 | completion: 68% (epoch=136)(element=6266) loss = 0.001 error progress = 1.97593% |
||
| 2572 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.96503% |
||
| 2573 | completion: 76% (epoch=152)(element=6266) loss = 0 error progress = 1.95409% |
||
| 2574 | completion: 80% (epoch=160)(element=6266) loss = 0.002 error progress = 1.94359% |
||
| 2575 | completion: 84% (epoch=168)(element=6266) loss = 0.001 error progress = 1.93334% |
||
| 2576 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.9225% |
||
| 2577 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.91296% |
||
| 2578 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.90443% |
||
| 2579 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.89546% |
||
| 2580 | |||
| 2581 | |||
| 2582 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2583 | |||
| 2584 | Correct predictions = 88.46% |
||
| 2585 | #FPplusFN=2089 |
||
| 2586 | minError=220 minErrorIndex=1 globalThreshold =-1.2074667560887 |
||
| 2587 | metrics area_roc = 91.65% |
||
| 2588 | (beta) metrics area_precision_recall = 70.85% |
||
| 2589 | |||
| 2590 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2591 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2592 | TOTAL: |
||
| 2593 | FN = 213 / 516 (truth == 1) & (prediction < threshold) |
||
| 2594 | TP = 303 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2595 | |||
| 2596 | FP = 28 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2597 | TN = 1,545 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2598 | |||
| 2599 | |||
| 2600 | :::: Matthews correlation coefficient = +0.67 :::: |
||
| 2601 | |||
| 2602 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2603 | recall = 0.59 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2604 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2605 | f1_score = 0.72 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2606 | Saved model file: ./models/model_hus350_hl3_time1524271237 |
||
| 2607 | |||
| 2608 | $$$ hidden_units = 400 hidden_layers = 3 $$$ |
||
| 2609 | XAVIER_INITIALIZATION = true |
||
| 2610 | completion: 4% (epoch=8)(element=6266) loss = 0.003 error progress = 2.69412% |
||
| 2611 | completion: 8% (epoch=16)(element=6266) loss = 0.004 error progress = 2.48582% |
||
| 2612 | completion: 12% (epoch=24)(element=6266) loss = 0.009 error progress = 2.36853% |
||
| 2613 | completion: 16% (epoch=32)(element=6266) loss = 0.001 error progress = 2.29795% |
||
| 2614 | completion: 20% (epoch=40)(element=6266) loss = 0 error progress = 2.24087% |
||
| 2615 | completion: 24% (epoch=48)(element=6266) loss = 0.003 error progress = 2.19651% |
||
| 2616 | completion: 28% (epoch=56)(element=6266) loss = 0.001 error progress = 2.15921% |
||
| 2617 | completion: 32% (epoch=64)(element=6266) loss = 0.002 error progress = 2.12678% |
||
| 2618 | completion: 36% (epoch=72)(element=6266) loss = 0.001 error progress = 2.10184% |
||
| 2619 | completion: 40% (epoch=80)(element=6266) loss = 0.002 error progress = 2.07807% |
||
| 2620 | completion: 44% (epoch=88)(element=6266) loss = 0 error progress = 2.05459% |
||
| 2621 | completion: 48% (epoch=96)(element=6266) loss = 0.001 error progress = 2.03411% |
||
| 2622 | completion: 52% (epoch=104)(element=6266) loss = 0.005 error progress = 2.01713% |
||
| 2623 | completion: 56% (epoch=112)(element=6266) loss = 0.002 error progress = 1.99963% |
||
| 2624 | completion: 60% (epoch=120)(element=6266) loss = 0.001 error progress = 1.98445% |
||
| 2625 | completion: 64% (epoch=128)(element=6266) loss = 0.001 error progress = 1.97139% |
||
| 2626 | completion: 68% (epoch=136)(element=6266) loss = 0 error progress = 1.95878% |
||
| 2627 | completion: 72% (epoch=144)(element=6266) loss = 0.001 error progress = 1.94764% |
||
| 2628 | completion: 76% (epoch=152)(element=6266) loss = 0.001 error progress = 1.93582% |
||
| 2629 | completion: 80% (epoch=160)(element=6266) loss = 0.001 error progress = 1.92561% |
||
| 2630 | completion: 84% (epoch=168)(element=6266) loss = 0.002 error progress = 1.91535% |
||
| 2631 | completion: 88% (epoch=176)(element=6266) loss = 0.001 error progress = 1.90427% |
||
| 2632 | completion: 92% (epoch=184)(element=6266) loss = 0.001 error progress = 1.8942% |
||
| 2633 | completion: 96% (epoch=192)(element=6266) loss = 0.001 error progress = 1.88464% |
||
| 2634 | completion: 100% (epoch=200)(element=6266) loss = 0.001 error progress = 1.87506% |
||
| 2635 | |||
| 2636 | |||
| 2637 | ### executeTest(perceptron, validation_patient_profile) |
||
| 2638 | |||
| 2639 | Correct predictions = 87.84% |
||
| 2640 | #FPplusFN=2089 |
||
| 2641 | minError=197 minErrorIndex=1 globalThreshold =-1.0443069674754 |
||
| 2642 | metrics area_roc = 91.61% |
||
| 2643 | (beta) metrics area_precision_recall = 73.94% |
||
| 2644 | |||
| 2645 | duration the new area_roc metrics ROC_AUC_computer function: 0 seconds |
||
| 2646 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 00 seconds |
||
| 2647 | TOTAL: |
||
| 2648 | FN = 236 / 516 (truth == 1) & (prediction < threshold) |
||
| 2649 | TP = 280 / 516 (truth == 1) & (prediction >= threshold) |
||
| 2650 | |||
| 2651 | FP = 18 / 1,573 (truth == 0) & (prediction >= threshold) |
||
| 2652 | TN = 1,555 / 1,573 (truth == 0) & (prediction < threshold) |
||
| 2653 | |||
| 2654 | |||
| 2655 | :::: Matthews correlation coefficient = +0.66 :::: |
||
| 2656 | |||
| 2657 | accuracy = 0.88 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2658 | recall = 0.54 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2659 | specificity = 0.99 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2660 | f1_score = 0.69 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2661 | Saved model file: ./models/model_hus400_hl3_time1524272934 |
||
| 2662 | |||
| 2663 | @ @ [1] AUPR = 43.67% MCC = 0.25 F1_score = 0.2 AUROC = 77.03% hidden units = 5 hidden layers = 1 @ @ |
||
| 2664 | @ @ [2] AUPR = 61.32% MCC = 0.35 F1_score = 0.28 AUROC = 86.44% hidden units = 10 hidden layers = 1 @ @ |
||
| 2665 | @ @ [3] AUPR = 64.08% MCC = 0.45 F1_score = 0.49 AUROC = 90.23% hidden units = 25 hidden layers = 1 @ @ |
||
| 2666 | @ @ [4] AUPR = 70.31% MCC = 0.51 F1_score = 0.52 AUROC = 90.52% hidden units = 50 hidden layers = 1 @ @ |
||
| 2667 | @ @ [5] AUPR = 70.92% MCC = 0.56 F1_score = 0.57 AUROC = 90.84% hidden units = 75 hidden layers = 1 @ @ |
||
| 2668 | @ @ [6] AUPR = 71.36% MCC = 0.61 F1_score = 0.65 AUROC = 90.74% hidden units = 100 hidden layers = 1 @ @ |
||
| 2669 | @ @ [7] AUPR = 71.96% MCC = 0.66 F1_score = 0.72 AUROC = 92.19% hidden units = 125 hidden layers = 1 @ @ |
||
| 2670 | @ @ [8] AUPR = 72.27% MCC = 0.65 F1_score = 0.7 AUROC = 91.75% hidden units = 150 hidden layers = 1 @ @ |
||
| 2671 | @ @ [9] AUPR = 71.42% MCC = 0.65 F1_score = 0.69 AUROC = 91.62% hidden units = 175 hidden layers = 1 @ @ |
||
| 2672 | @ @ [10] AUPR = 71.42% MCC = 0.63 F1_score = 0.67 AUROC = 91.42% hidden units = 200 hidden layers = 1 @ @ |
||
| 2673 | @ @ [11] AUPR = 72.11% MCC = 0.65 F1_score = 0.7 AUROC = 91.97% hidden units = 225 hidden layers = 1 @ @ |
||
| 2674 | @ @ [12] AUPR = 70.61% MCC = 0.64 F1_score = 0.68 AUROC = 91.79% hidden units = 250 hidden layers = 1 @ @ |
||
| 2675 | @ @ [13] AUPR = 73.6% MCC = 0.69 F1_score = 0.73 AUROC = 92.3% hidden units = 275 hidden layers = 1 @ @ |
||
| 2676 | @ @ [14] AUPR = 71.01% MCC = 0.63 F1_score = 0.66 AUROC = 91.89% hidden units = 300 hidden layers = 1 @ @ |
||
| 2677 | @ @ [15] AUPR = 72.91% MCC = 0.64 F1_score = 0.67 AUROC = 92.4% hidden units = 350 hidden layers = 1 @ @ |
||
| 2678 | @ @ [16] AUPR = 70.55% MCC = 0.63 F1_score = 0.68 AUROC = 91.63% hidden units = 400 hidden layers = 1 @ @ |
||
| 2679 | @ @ [17] AUPR = 27.71% MCC = -2 F1_score = 0 AUROC = 71.41% hidden units = 5 hidden layers = 2 @ @ |
||
| 2680 | @ @ [18] AUPR = 52.92% MCC = 0.28 F1_score = 0.25 AUROC = 85.56% hidden units = 10 hidden layers = 2 @ @ |
||
| 2681 | @ @ [19] AUPR = 60.71% MCC = 0.46 F1_score = 0.51 AUROC = 88.09% hidden units = 25 hidden layers = 2 @ @ |
||
| 2682 | @ @ [20] AUPR = 64.93% MCC = 0.51 F1_score = 0.56 AUROC = 90.45% hidden units = 50 hidden layers = 2 @ @ |
||
| 2683 | @ @ [21] AUPR = 68.5% MCC = 0.62 F1_score = 0.66 AUROC = 91.11% hidden units = 75 hidden layers = 2 @ @ |
||
| 2684 | @ @ [22] AUPR = 54.64% MCC = 0.64 F1_score = 0.66 AUROC = 90.52% hidden units = 100 hidden layers = 2 @ @ |
||
| 2685 | @ @ [23] AUPR = 70.31% MCC = 0.61 F1_score = 0.65 AUROC = 90.85% hidden units = 125 hidden layers = 2 @ @ |
||
| 2686 | @ @ [24] AUPR = 72.67% MCC = 0.66 F1_score = 0.7 AUROC = 92.18% hidden units = 150 hidden layers = 2 @ @ |
||
| 2687 | @ @ [25] AUPR = 72.44% MCC = 0.64 F1_score = 0.68 AUROC = 91.91% hidden units = 175 hidden layers = 2 @ @ |
||
| 2688 | @ @ [26] AUPR = 74.02% MCC = 0.67 F1_score = 0.71 AUROC = 91.83% hidden units = 200 hidden layers = 2 @ @ |
||
| 2689 | @ @ [27] AUPR = 71.73% MCC = 0.65 F1_score = 0.7 AUROC = 92.09% hidden units = 225 hidden layers = 2 @ @ |
||
| 2690 | @ @ [28] AUPR = 73.34% MCC = 0.65 F1_score = 0.69 AUROC = 92.07% hidden units = 250 hidden layers = 2 @ @ |
||
| 2691 | @ @ [29] AUPR = 72.69% MCC = 0.66 F1_score = 0.69 AUROC = 91.55% hidden units = 275 hidden layers = 2 @ @ |
||
| 2692 | @ @ [30] AUPR = 73.39% MCC = 0.68 F1_score = 0.73 AUROC = 91.85% hidden units = 300 hidden layers = 2 @ @ |
||
| 2693 | @ @ [31] AUPR = 73.57% MCC = 0.66 F1_score = 0.7 AUROC = 92% hidden units = 350 hidden layers = 2 @ @ |
||
| 2694 | @ @ [32] AUPR = 74.27% MCC = 0.67 F1_score = 0.71 AUROC = 92.56% hidden units = 400 hidden layers = 2 @ @ |
||
| 2695 | @ @ [33] AUPR = 19.18% MCC = -2 F1_score = 0 AUROC = 63.79% hidden units = 5 hidden layers = 3 @ @ |
||
| 2696 | @ @ [34] AUPR = 39.91% MCC = -2 F1_score = 0 AUROC = 80.86% hidden units = 10 hidden layers = 3 @ @ |
||
| 2697 | @ @ [35] AUPR = 57.81% MCC = 0.4 F1_score = 0.42 AUROC = 83.9% hidden units = 25 hidden layers = 3 @ @ |
||
| 2698 | @ @ [36] AUPR = 64.73% MCC = 0.5 F1_score = 0.5 AUROC = 88.61% hidden units = 50 hidden layers = 3 @ @ |
||
| 2699 | @ @ [37] AUPR = 69.05% MCC = 0.58 F1_score = 0.61 AUROC = 90.79% hidden units = 75 hidden layers = 3 @ @ |
||
| 2700 | @ @ [38] AUPR = 53.05% MCC = 0.63 F1_score = 0.67 AUROC = 90.91% hidden units = 100 hidden layers = 3 @ @ |
||
| 2701 | @ @ [39] AUPR = 70.07% MCC = 0.63 F1_score = 0.69 AUROC = 91.38% hidden units = 125 hidden layers = 3 @ @ |
||
| 2702 | @ @ [40] AUPR = 64.03% MCC = 0.62 F1_score = 0.7 AUROC = 90.4% hidden units = 150 hidden layers = 3 @ @ |
||
| 2703 | @ @ [41] AUPR = 71.45% MCC = 0.67 F1_score = 0.72 AUROC = 91.6% hidden units = 175 hidden layers = 3 @ @ |
||
| 2704 | @ @ [42] AUPR = 70.14% MCC = 0.65 F1_score = 0.69 AUROC = 91.61% hidden units = 200 hidden layers = 3 @ @ |
||
| 2705 | @ @ [43] AUPR = 71.16% MCC = 0.67 F1_score = 0.72 AUROC = 91.79% hidden units = 225 hidden layers = 3 @ @ |
||
| 2706 | @ @ [44] AUPR = 72.21% MCC = 0.66 F1_score = 0.71 AUROC = 91.82% hidden units = 250 hidden layers = 3 @ @ |
||
| 2707 | @ @ [45] AUPR = 54.69% MCC = 0.66 F1_score = 0.69 AUROC = 91.38% hidden units = 275 hidden layers = 3 @ @ |
||
| 2708 | @ @ [46] AUPR = 73.77% MCC = 0.65 F1_score = 0.68 AUROC = 91.65% hidden units = 300 hidden layers = 3 @ @ |
||
| 2709 | @ @ [47] AUPR = 70.85% MCC = 0.67 F1_score = 0.72 AUROC = 91.65% hidden units = 350 hidden layers = 3 @ @ |
||
| 2710 | @ @ [48] AUPR = 73.94% MCC = 0.66 F1_score = 0.69 AUROC = 91.61% hidden units = 400 hidden layers = 3 @ @ |
||
| 2711 | |||
| 2712 | modelFileVect[13] |
||
| 2713 | modelFileToLoad =./models/model_hus275_hl1_time1524252913 |
||
| 2714 | |||
| 2715 | |||
| 2716 | ### executeTest(loadedModel, test_patient_profile) |
||
| 2717 | |||
| 2718 | Correct predictions = 88.94% |
||
| 2719 | #FPplusFN=2088 |
||
| 2720 | minError=201 minErrorIndex=1 globalThreshold =-1.4486029425536 |
||
| 2721 | metrics area_roc = 94.87% |
||
| 2722 | (beta) metrics area_precision_recall = 75.06% |
||
| 2723 | |||
| 2724 | duration the new area_roc metrics ROC_AUC_computer function: 1 seconds |
||
| 2725 | duration the new area_roc metrics ROC_AUC_computer function: 00 days, 00 hours, 00 minutes, 01 seconds |
||
| 2726 | TOTAL: |
||
| 2727 | FN = 193 / 535 (truth == 1) & (prediction < threshold) |
||
| 2728 | TP = 342 / 535 (truth == 1) & (prediction >= threshold) |
||
| 2729 | |||
| 2730 | FP = 38 / 1,553 (truth == 0) & (prediction >= threshold) |
||
| 2731 | TN = 1,515 / 1,553 (truth == 0) & (prediction < threshold) |
||
| 2732 | |||
| 2733 | |||
| 2734 | :::: Matthews correlation coefficient = +0.7 :::: |
||
| 2735 | |||
| 2736 | accuracy = 0.89 = (tp + tn) / (tp + tn +fn + fp) [worst = 0, best = 1] |
||
| 2737 | recall = 0.64 = tp / (tp + fn) [worst = 0, best = 1] |
||
| 2738 | specificity = 0.98 = tn / (tn + fp) [worst = 0, best = 1] |
||
| 2739 | f1_score = 0.75 = (2*tp) / (2*tp+fp+fn) [worst = 0, best = 1] |
||
| 2740 | ':':':':' lastMCC = 0.7 lastF1score = 0.75 ':':':':' |
||
| 2741 | command: rm ./models/model_hus5_hl1_time1524249852 |
||
| 2742 | command: rm ./models/model_hus10_hl1_time1524250000 |
||
| 2743 | command: rm ./models/model_hus25_hl1_time1524250152 |
||
| 2744 | command: rm ./models/model_hus50_hl1_time1524250316 |
||
| 2745 | command: rm ./models/model_hus75_hl1_time1524250499 |
||
| 2746 | command: rm ./models/model_hus100_hl1_time1524250700 |
||
| 2747 | command: rm ./models/model_hus125_hl1_time1524250924 |
||
| 2748 | command: rm ./models/model_hus150_hl1_time1524251174 |
||
| 2749 | command: rm ./models/model_hus175_hl1_time1524251455 |
||
| 2750 | command: rm ./models/model_hus200_hl1_time1524251765 |
||
| 2751 | command: rm ./models/model_hus225_hl1_time1524252108 |
||
| 2752 | command: rm ./models/model_hus250_hl1_time1524252489 |
||
| 2753 | command: rm ./models/model_hus275_hl1_time1524252913 |
||
| 2754 | command: rm ./models/model_hus300_hl1_time1524253378 |
||
| 2755 | command: rm ./models/model_hus350_hl1_time1524253954 |
||
| 2756 | command: rm ./models/model_hus400_hl1_time1524254634 |
||
| 2757 | command: rm ./models/model_hus5_hl2_time1524254823 |
||
| 2758 | command: rm ./models/model_hus10_hl2_time1524255019 |
||
| 2759 | command: rm ./models/model_hus25_hl2_time1524255225 |
||
| 2760 | command: rm ./models/model_hus50_hl2_time1524255449 |
||
| 2761 | command: rm ./models/model_hus75_hl2_time1524255699 |
||
| 2762 | command: rm ./models/model_hus100_hl2_time1524255980 |
||
| 2763 | command: rm ./models/model_hus125_hl2_time1524256300 |
||
| 2764 | command: rm ./models/model_hus150_hl2_time1524256668 |
||
| 2765 | command: rm ./models/model_hus175_hl2_time1524257088 |
||
| 2766 | command: rm ./models/model_hus200_hl2_time1524257568 |
||
| 2767 | command: rm ./models/model_hus225_hl2_time1524258109 |
||
| 2768 | command: rm ./models/model_hus250_hl2_time1524258725 |
||
| 2769 | command: rm ./models/model_hus275_hl2_time1524259422 |
||
| 2770 | command: rm ./models/model_hus300_hl2_time1524260213 |
||
| 2771 | command: rm ./models/model_hus350_hl2_time1524261188 |
||
| 2772 | command: rm ./models/model_hus400_hl2_time1524262380 |
||
| 2773 | command: rm ./models/model_hus5_hl3_time1524262620 |
||
| 2774 | command: rm ./models/model_hus10_hl3_time1524262862 |
||
| 2775 | command: rm ./models/model_hus25_hl3_time1524263117 |
||
| 2776 | command: rm ./models/model_hus50_hl3_time1524263399 |
||
| 2777 | command: rm ./models/model_hus75_hl3_time1524263715 |
||
| 2778 | command: rm ./models/model_hus100_hl3_time1524264078 |
||
| 2779 | command: rm ./models/model_hus125_hl3_time1524264498 |
||
| 2780 | command: rm ./models/model_hus150_hl3_time1524264987 |
||
| 2781 | command: rm ./models/model_hus175_hl3_time1524265554 |
||
| 2782 | command: rm ./models/model_hus200_hl3_time1524266211 |
||
| 2783 | command: rm ./models/model_hus225_hl3_time1524266965 |
||
| 2784 | command: rm ./models/model_hus250_hl3_time1524267815 |
||
| 2785 | command: rm ./models/model_hus275_hl3_time1524268770 |
||
| 2786 | command: rm ./models/model_hus300_hl3_time1524269864 |
||
| 2787 | command: rm ./models/model_hus350_hl3_time1524271237 |
||
| 2788 | command: rm ./models/model_hus400_hl3_time1524272934 |
||
| 2789 | |||
| 2790 | duration complete execution: 23,234 seconds |
||
| 2791 | duration complete execution: 00 days, 06 hours, 27 minutes, 14 seconds |