|
a |
|
b/man/plcom2012.Rd |
|
|
1 |
% Generated by roxygen2: do not edit by hand |
|
|
2 |
% Please edit documentation in R/plcom2012.R |
|
|
3 |
\name{plcom2012} |
|
|
4 |
\alias{plcom2012} |
|
|
5 |
\title{PLCOm2012 risk prediction model for lung cancer} |
|
|
6 |
\usage{ |
|
|
7 |
plcom2012( |
|
|
8 |
age, |
|
|
9 |
race, |
|
|
10 |
education, |
|
|
11 |
bmi, |
|
|
12 |
copd, |
|
|
13 |
cancer_hist, |
|
|
14 |
family_hist_lung_cancer, |
|
|
15 |
smoking_status, |
|
|
16 |
smoking_intensity, |
|
|
17 |
duration_smoking, |
|
|
18 |
smoking_quit_time |
|
|
19 |
) |
|
|
20 |
} |
|
|
21 |
\arguments{ |
|
|
22 |
\item{age}{a vector of patient's age} |
|
|
23 |
|
|
|
24 |
\item{race}{categorical variable of patient's race or ethnic group (White, Black, Hispanic, |
|
|
25 |
Asian, American Indian, Alaskan Native, Native Hawaiian, Pacific Islander)} |
|
|
26 |
|
|
|
27 |
\item{education}{education was measured in six ordinal levels: less than high-school graduate (level 1), |
|
|
28 |
high-school graduate (level 2), some training after high school (level 3), some college (level 4), |
|
|
29 |
college graduate (level 5), and postgraduate or professional degree (level 6)} |
|
|
30 |
|
|
|
31 |
\item{bmi}{a vector of patient's body mass index, per 1 unit of increase} |
|
|
32 |
|
|
|
33 |
\item{copd}{binary variable of chronic obstructive pulmonary disease (yes as 1 or no as 0)} |
|
|
34 |
|
|
|
35 |
\item{cancer_hist}{binary variable of patient's cancer history (yes as 1 or no as 0)} |
|
|
36 |
|
|
|
37 |
\item{family_hist_lung_cancer}{binary variable of patient's family history of lung cancer (yes as 1 or no as 0)} |
|
|
38 |
|
|
|
39 |
\item{smoking_status}{binary variable of patient's smoking status (current as 1 or former as 0)} |
|
|
40 |
|
|
|
41 |
\item{smoking_intensity}{a vector of the number cigarettes patient smokes per day} |
|
|
42 |
|
|
|
43 |
\item{duration_smoking}{a vector of patient's duration of smoking, per 1-yr increase} |
|
|
44 |
|
|
|
45 |
\item{smoking_quit_time}{a vector of patient's smoking quit time, per 1-yr increase} |
|
|
46 |
} |
|
|
47 |
\value{ |
|
|
48 |
prob patient's 6-year probability of lung-cancer |
|
|
49 |
} |
|
|
50 |
\description{ |
|
|
51 |
PLCOm2012 risk prediction model for lung cancer |
|
|
52 |
} |
|
|
53 |
\examples{ |
|
|
54 |
plcom2012(age=62, race='White', education=4, bmi=27, copd=0, cancer_hist=0, |
|
|
55 |
family_hist_lung_cancer=0, smoking_status=0, smoking_intensity=80, |
|
|
56 |
duration_smoking=27, smoking_quit_time=10) |
|
|
57 |
} |