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CinC2022
Heart Murmur Detection from Phonocardiogram Recordings: The George B. Moody PhysioNet Challenge 2022
- Knowledge about Heart Murmur
- The Conference
- Conference Paper
- Conference Poster
- Final Scores
- Top Team Papers
- Official Phase Leaderboards
- Miscellaneous
Knowledge about Heart Murmur
utils/HeartMurmur.md contains knowledge about heart murmur collected from various sources.
The Conference
Conference Paper
Click to view!
~~Folder [tex](tex) contains latex source code for the CinC2022 conference paper, written using [Overleaf](https://www.overleaf.com/).~~ Moved to another repository as the size of the whole repository exceeds the limit of [Overleaf](https://www.overleaf.com/).Conference Poster
Poster created with baposter using the Overleaf template
Click to view!
Final Scores
Final scores are released in https://physionetchallenges.org/2022/results/ in 5 .tsv files.
These files were gathered in one .xlsx file,
which was uploaded into Google Sheets.
Click to expand!
~~Final score files would keep on changing for some time as unofficial teams are having their rebuttals against the organizers.~~ Final score files were frozen from 2022/09/18 (Updated again....). One can load the 5 tables all at once viapd.read_excel("./results/final_scores.xlsx", engine="openpyxl", sheet_name=None)
from utils._final_results import get_team_digest
get_team_digest("Revenger", fmt="pd", latest=True) # pandas DataFrame format
get_team_digest("Revenger", fmt="tex", latest=True) # latex format (string)
Top Team Papers
Click to view!
- [CUED_Acoustics](https://cinc.org/2022/Program/accepted/20_Preprint.pdf) - [HearHeart](https://cinc.org/2022/Program/accepted/165_Preprint.pdf) - [HearTech](https://cinc.org/2022/Program/accepted/439_Preprint.pdf) - [prna](https://cinc.org/2022/Program/accepted/309_Preprint.pdf) - [CeZIS](https://cinc.org/2022/Program/accepted/67_Preprint.pdf) - [CAU_UMN](https://cinc.org/2022/Program/accepted/71_Preprint.pdf) - [Melbourne Kangas](https://cinc.org/2022/Program/accepted/310_Preprint.pdf)Official Phase Leaderboards
Click to expand!
The leaderboards can be loaded via# beautifulsoup4 and html5lib required
import pandas as pd
outcome_url = "https://docs.google.com/spreadsheets/u/0/d/e/2PACX-1vRNBATogMRsfio3938bU4r6fcAad85jNzTbSRtRhQ74xHw9shuYoP4uxkK6uKV1zw8CKjPC3AMm33qn/pubhtml/sheet?headers=false&gid=1883863848"
murmur_url = "https://docs.google.com/spreadsheets/u/0/d/e/2PACX-1vRNBATogMRsfio3938bU4r6fcAad85jNzTbSRtRhQ74xHw9shuYoP4uxkK6uKV1zw8CKjPC3AMm33qn/pubhtml/sheet?headers=false&gid=0"
df_outcome = pd.read_html(outcome_url, flavor="bs4", header=[1], index_col=[0])[0].reset_index(drop=True).dropna()
df_outcome.Rank = df_outcome.Rank.astype(int)
# df_outcome.set_index("Rank", inplace=True) # Rank has duplicates
df_murmur = pd.read_html(murmur_url, flavor="bs4", header=[1], index_col=[0])[0].reset_index(drop=True).dropna()
df_murmur.Rank = df_murmur.Rank.astype(int)
# df_murmur.set_index("Rank", inplace=True) # Rank has duplicates
from string import punctuation
team_name_pattern = f"""[\\w\\s{punctuation}]+"""
email_pattern = (
f"""We processed an entry from Team (?P<team_name>{team_name_pattern}) """
"""for the Official phase of the George B\\. Moody PhysioNet Challenge 2022\\. """
"""This entry was submitted on (?P<submission_time>[\\d]{1,2}/[\\d]{1,2}/2022 [\\d]{1,2}:[\\d]{1,2}:[\\d]{1,2} ET) """
f"""with ID (?P<submission_id>{team_name_pattern}_[\\d]{{1,5}}_[\\d]{{1,3}})\\.[\\n]+"""
"""We successfully evaluated your entry, which received the score (?P<outcome_cost>[\\d\\.]+) and """
"""(?P<murmur_weighted_accuracy>[\\d\\.]+) using the Challenge evaluation metric on the validation set\\. """
"""This entry was your team's (?P<submission_number>[\\d]{1,2})/10 entry for the Official phase\\."""
)
# usage:
# list(re.finditer(email_pattern, email_content))[0].groupdict()