[074d3d]: / examples / preprocessing / virtual_evoked.py

Download this file

63 lines (46 with data), 1.6 kB

 1
 2
 3
 4
 5
 6
 7
 8
 9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
"""
.. _ex-virtual-evoked:
=======================
Remap MEG channel types
=======================
In this example, MEG data are remapped from one channel type to another.
This is useful to:
- visualize combined magnetometers and gradiometers as magnetometers
or gradiometers.
- run statistics from both magnetometers and gradiometers while
working with a single type of channels.
"""
# Author: Mainak Jas <mainak.jas@telecom-paristech.fr>
# License: BSD-3-Clause
# Copyright the MNE-Python contributors.
# %%
import mne
from mne.datasets import sample
print(__doc__)
# read the evoked
data_path = sample.data_path()
meg_path = data_path / "MEG" / "sample"
fname = meg_path / "sample_audvis-ave.fif"
evoked = mne.read_evokeds(fname, condition="Left Auditory", baseline=(None, 0))
# %%
# First, let's call remap gradiometers to magnometers, and plot
# the original and remapped topomaps of the magnetometers.
# go from grad + mag to mag and plot original mag
virt_evoked = evoked.as_type("mag")
fig = evoked.plot_topomap(ch_type="mag")
fig.suptitle("mag (original)")
# %%
# plot interpolated grad + mag
fig = virt_evoked.plot_topomap(ch_type="mag")
fig.suptitle("mag (interpolated from mag + grad)")
# %%
# Now, we remap magnometers to gradiometers, and plot
# the original and remapped topomaps of the gradiometers
# go from grad + mag to grad and plot original grad
virt_evoked = evoked.as_type("grad")
fig = evoked.plot_topomap(ch_type="grad")
fig.suptitle("grad (original)")
# %%
# plot interpolated grad + mag
fig = virt_evoked.plot_topomap(ch_type="grad")
fig.suptitle("grad (interpolated from mag + grad)")