--- a +++ b/doc/api/statistics.rst @@ -0,0 +1,73 @@ + +.. _api_reference_statistics: + +Statistics +========== + +:py:mod:`mne.stats`: + +.. automodule:: mne.stats + :no-members: + :no-inherited-members: + +.. currentmodule:: mne.stats + +Parametric statistics (see :mod:`scipy.stats` and :mod:`statsmodels` for more +options): + +.. autosummary:: + :toctree: ../generated/ + + ttest_1samp_no_p + ttest_ind_no_p + f_oneway + f_mway_rm + f_threshold_mway_rm + linear_regression + linear_regression_raw + +Mass-univariate multiple comparison correction: + +.. autosummary:: + :toctree: ../generated/ + + bonferroni_correction + fdr_correction + +Non-parametric (clustering) resampling methods: + +.. autosummary:: + :toctree: ../generated/ + + combine_adjacency + permutation_cluster_test + permutation_cluster_1samp_test + permutation_t_test + spatio_temporal_cluster_test + spatio_temporal_cluster_1samp_test + summarize_clusters_stc + bootstrap_confidence_interval + +ERP-related statistics: + +.. autosummary:: + :toctree: ../generated/ + + erp.compute_sme + +Compute ``adjacency`` matrices for cluster-level statistics: + +.. currentmodule:: mne + +.. autosummary:: + :toctree: ../generated/ + + channels.find_ch_adjacency + channels.read_ch_adjacency + spatial_dist_adjacency + spatial_src_adjacency + spatial_tris_adjacency + spatial_inter_hemi_adjacency + spatio_temporal_src_adjacency + spatio_temporal_tris_adjacency + spatio_temporal_dist_adjacency