Preprocessing

=============

Projections:

.. currentmodule:: mne

.. autosummary::

   :toctree: ../generated/

   :template: autosummary/class_no_inherited_members.rst

   Projection

.. autosummary::

   :toctree: ../generated/

   compute_proj_epochs

   compute_proj_evoked

   compute_proj_raw

   read_proj

   write_proj

:py:mod:`mne.channels`:

.. currentmodule:: mne.channels

.. automodule:: mne.channels

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   Layout

   DigMontage

   compute_native_head_t

   fix_mag_coil_types

   read_polhemus_fastscan

   get_builtin_montages

   make_dig_montage

   read_dig_polhemus_isotrak

   read_dig_captrak

   read_dig_dat

   read_dig_egi

   read_dig_fif

   read_dig_hpts

   read_dig_localite

   make_standard_montage

   read_custom_montage

   transform_to_head

   compute_dev_head_t

   read_layout

   find_layout

   make_eeg_layout

   make_grid_layout

   find_ch_adjacency

   get_builtin_ch_adjacencies

   read_ch_adjacency

   equalize_channels

   unify_bad_channels

   rename_channels

   generate_2d_layout

   make_1020_channel_selections

   combine_channels

:py:mod:`mne.preprocessing`:

.. currentmodule:: mne.preprocessing

.. automodule:: mne.preprocessing

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   ICA

   Xdawn

   EOGRegression

   annotate_amplitude

   annotate_break

   annotate_movement

   annotate_muscle_zscore

   annotate_nan

   compute_average_dev_head_t

   compute_current_source_density

   compute_bridged_electrodes

   compute_fine_calibration

   compute_maxwell_basis

   compute_proj_ecg

   compute_proj_eog

   compute_proj_hfc

   cortical_signal_suppression

   create_ecg_epochs

   create_eog_epochs

   find_bad_channels_lof

   find_bad_channels_maxwell

   find_ecg_events

   find_eog_events

   fix_stim_artifact

   ica_find_ecg_events

   ica_find_eog_events

   infomax

   interpolate_bridged_electrodes

   equalize_bads

   maxwell_filter

   maxwell_filter_prepare_emptyroom

   oversampled_temporal_projection

   peak_finder

   read_ica

   read_eog_regression

   realign_raw

   regress_artifact

   corrmap

   read_ica_eeglab

   read_fine_calibration

   write_fine_calibration

   apply_pca_obs

:py:mod:`mne.preprocessing.nirs`:

.. currentmodule:: mne.preprocessing.nirs

.. automodule:: mne.preprocessing.nirs

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   optical_density

   beer_lambert_law

   source_detector_distances

   short_channels

   scalp_coupling_index

   temporal_derivative_distribution_repair

:py:mod:`mne.preprocessing.ieeg`:

.. currentmodule:: mne.preprocessing.ieeg

.. automodule:: mne.preprocessing.ieeg

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   project_sensors_onto_brain

   make_montage_volume

   warp_montage

:py:mod:`mne.preprocessing.eyetracking`:

.. currentmodule:: mne.preprocessing.eyetracking

.. automodule:: mne.preprocessing.eyetracking

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   Calibration

   read_eyelink_calibration

   set_channel_types_eyetrack

   convert_units

   get_screen_visual_angle

   interpolate_blinks

EEG referencing:

.. currentmodule:: mne

.. autosummary::

   :toctree: ../generated/

   add_reference_channels

   set_bipolar_reference

   set_eeg_reference

:py:mod:`mne.filter`:

.. currentmodule:: mne.filter

.. automodule:: mne.filter

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   construct_iir_filter

   create_filter

   estimate_ringing_samples

   filter_data

   notch_filter

   resample

:py:mod:`mne.chpi`

.. currentmodule:: mne.chpi

.. automodule:: mne.chpi

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   compute_chpi_amplitudes

   compute_chpi_snr

   compute_chpi_locs

   compute_head_pos

   extract_chpi_locs_ctf

   extract_chpi_locs_kit

   filter_chpi

   get_active_chpi

   get_chpi_info

   head_pos_to_trans_rot_t

   read_head_pos

   write_head_pos

:py:mod:`mne.transforms`

.. currentmodule:: mne.transforms

.. automodule:: mne.transforms

   :no-members:

   :no-inherited-members:

.. autosummary::

   :toctree: ../generated/

   Transform

   quat_to_rot

   rot_to_quat

   read_ras_mni_t