function test_compiled_version(varargin)
global CURRENTSTUDY CURRENTSET ALLEEG EEG STUDY
res = questdlg2('Are you seeing the command line outputs?', 'Compiled version', 'No', 'Yes', 'Yes');
if strcmpi(res, 'No')
res = questdlg2( [ 'Users need to be able to see command line' 10 ...
'output even for the compiled version. This' 10 ...
'require fixing and recompiling. Continue anyway?' ], 'Compiled version', 'No', 'Yes', 'Yes');
if strcmpi(res, 'No')
return
end
end
% installing plugins
if ~isdeployed && ismatlab
plugin_askinstall('PICARD', 'picard', true);
plugin_askinstall('Fieldtrip-lite', 'ft_defaults', true);
end
try
% test binary files
writtingIssue = 0;
if isdeployed
try
TMP = pop_loadxdf( fullfile('sample_data', 'test_data', 'test.xdf') );
catch
fprintf(2, '\pop_loadxdf error could be due to starting EEGLAB in the wrong folder\n\n')
end
try
TMP = pop_loadbv( fullfile('sample_data', 'test_data'), 'testbva.vhdr' );
catch
fprintf(2, '\pop_loadbv error could be due to starting EEGLAB in the wrong folder\n\n')
end
try
TMP = pop_loadcnt( fullfile('sample_data', 'test_data', 'test.cnt') );
catch
fprintf(2, '\pop_loadcnt error could be due to starting EEGLAB in the wrong folder\n\n')
end
try
TMP = pop_musemonitor( fullfile('sample_data', 'test_data', 'testmusemonitor.csv') );
catch
fprintf(2, '\pop_musemonitor error could be due to starting EEGLAB in the wrong folder\n\n')
end
try
TMP = pop_biosig( fullfile('sample_data', 'test_data', 'test.edf') );
catch
fprintf(2, '\pop_biosig error could be due to starting EEGLAB in the wrong folder\n\n')
end
try
TMP = pop_biosig( fullfile('sample_data', 'test_data', 'test.bdf') );
catch
fprintf(2, '\pop_biosig error could be due to starting EEGLAB in the wrong folder\n\n')
end
try
[TMP,TMP2] = pop_importbids( fullfile('sample_data', 'test_data', 'BIDS_test'), 'bidsevent', 'off' );
catch
fprintf(2, '\pop_importbids error could be due to permission issues, try running EEGLAB as administrator\n\n')
writtingIssue = 1;
end
try
TMP = pop_mffimport( fullfile(pwd, 'sample_data', 'test_data', 'testmff.mff'), 'code' );
catch
fprintf(2, '\npop_mffimport error could be due to permission issues, try running EEGLAB as administrator\n\n')
writtingIssue = 1;
end
end
% EEGLAB history file generated on the 08-Jul-2020
% ------------------------------------------------
EEG = pop_loadset( 'filename', 'eeglab_data.set');
EEG = eeg_checkset( EEG );
EEG = pop_loadset('filename','eeglab_data.set');
EEG = eeg_checkset( EEG );
EEG.etc.eeglabvers = 'development head'; % this tracks which version of EEGLAB is being used, you may ignore it
EEG = pop_loadset('filename','eeglab_data.set');
EEG = eeg_checkset( EEG );
EEG=pop_chanedit(EEG, 'lookup','standard-10-5-cap385.elp','load',{'eeglab_chan32.locs' 'filetype' 'autodetect'});
EEG = eeg_checkset( EEG );
EEG.etc.eeglabvers = '2020.0'; % this tracks which version of EEGLAB is being used, you may ignore it
EEG = pop_loadset('filename','eeglab_data.set');
EEG = eeg_checkset( EEG );
EEG=pop_chanedit(EEG, 'lookup','standard_1005.elc');
EEG = eeg_checkset( EEG );
EEG = pop_clean_rawdata(EEG, 'FlatlineCriterion',5,'ChannelCriterion',0.8,'LineNoiseCriterion',4,'Highpass','off','BurstCriterion',20,'WindowCriterion',0.25,'BurstRejection','on','Distance','Euclidian','WindowCriterionTolerances',[-Inf 7] );
EEG = eeg_checkset( EEG );
EEG = eeg_checkset( EEG );
%EEG = pop_runica(EEG, 'icatype', 'runica', 'extended',1,'interrupt','on', 'pca', 10);
EEG = pop_runica(EEG, 'icatype', 'picard', 'pca', 10);
EEG = eeg_checkset( EEG );
EEG = pop_iclabel(EEG, 'default');
EEG = eeg_checkset( EEG );
EEG = pop_dipfit_settings( EEG, 'hdmfile','standard_vol.mat','coordformat','MNI','mrifile','standard_mri.mat','chanfile', 'standard_1005.elc','coord_transform',[0 0 0 0 0 -1.5708 1 1 1] ,'chansel',[1:31] );
EEG = eeg_checkset( EEG );
EEG = pop_multifit(EEG, 1,'threshold',100,'plotopt',{'normlen','on'});
EEG = eeg_checkset( EEG );
EEG = pop_headplot(EEG, 0, [1:3] , 'Components of dataset: Continuous EEG Data', [2 2], 'setup',{'eeglab_data.spl','meshfile','mheadnew.mat','transform',[-1.136 7.7523 11.4527 -0.027117 0.015531 -1.5455 0.91234 0.93161 0.80698] });
close;
EEG = pop_loadset( 'filename', 'eeglab_data_epochs_ica.set');
EEG = pop_dipfit_settings( EEG, 'hdmfile', 'standard_vol.mat','coordformat','MNI','mrifile','standard_mri.mat','chanfile','standard_1005.elc','coord_transform',[0.83215 -15.6287 2.4114 0.081214 0.00093739 -1.5732 1.1742 1.0601 1.1485],'chansel',[1:31] );
EEG = pop_leadfield(EEG, 'sourcemodel','LORETA-Talairach-BAs.mat','sourcemodel2mni',[],'downsample',1);
pop_dipfit_loreta(EEG, 6);
close
% STUDY
% -----
STUDY = []; CURRENTSTUDY = 0; ALLEEG = []; EEG=[]; CURRENTSET=[];
pop_editoptions( 'option_storedisk', 1);
fprintf(2, '\nStarting study test. Issues could be due to writting permissions.\n\n')
commands = {};
EEG = pop_loadset('filename','eeglab_data_epochs_ica.set');
for iS = 1:10
fileName1 = sprintf('eeglab_data_epochs_ica_c1_%d.set', iS);
EEG2 = EEG; EEG2.data = EEG2.data+rand(EEG.nbchan, EEG.pnts, EEG.trials)*20-10;
pop_saveset(EEG2, 'filename',fileName1);
fileName2 = sprintf('eeglab_data_epochs_ica_c2_%d.set', iS);
EEG2 = EEG; EEG2.data = EEG2.data+rand(EEG.nbchan, EEG.pnts, EEG.trials)*20-10;
EEG2.data(:, 129:end,:) = EEG2.data(:, 129:end,:)+rand(EEG.nbchan, 256, EEG.trials)*20-5;
pop_saveset(EEG2, 'filename',fileName2);
commands = { commands{:} ...
{ 'index' iS*2-1 'load' fileName1 'subject' sprintf('S%d', iS) 'condition' '1' } ...
{ 'index' iS*2 'load' fileName2 'subject' sprintf('S%d', iS) 'condition' '2' } };
end
[STUDY, ALLEEG] = std_editset(STUDY, ALLEEG, 'commands', commands);
CURRENTSTUDY = 1; EEG = ALLEEG; CURRENTSET = [1:length(EEG)];
STUDY = std_makedesign(STUDY, ALLEEG);
[STUDY, ALLEEG] = std_precomp(STUDY, ALLEEG, {},'savetrials','on','interp','on','recompute','on','erp','on');
STUDY = std_erpplot(STUDY,ALLEEG,'channels',{'Fz'}, 'design', 1);
close;
STUDY = pop_statparams(STUDY, 'mode','fieldtrip', 'condstats', 'on');
STUDY = std_erpplot(STUDY,ALLEEG,'channels',{'Fz'}, 'design', 1);
close;
% cleaning up
delete('eeglab_data_epochs_ica_*.*');
delete('*.daterp');
delete('eeglab_data.spl');
catch lasterr
% show error on command line
if isdeployed
% lasterr not avaialble in compiled version
warndlg2( 'Script failed with error below (see also command line). Fix and try again.', 'Compiled version');
else
disp(lasterr.getReport())
warndlg2( [ 'Script failed with error below (see also command line). Fix and try again.' 10 10 ...
lasterr.message ], 'Compiled version');
end
return
end
clear CURRENTSTUDY CURRENTSET ALLEEG EEG STUDY;
warndlg2( [ 'Script run successfully.' ], 'Compiled version');
evalin('base', 'eeglab');
end
Datasets
Models
