Switch to unified view

a b/DL-EEG Workshops/README.md
1
# Overview
2
3
This repo is currently a work in progress to make Deep Learning on EEG more accessible!
4
5
# Datasets
6
There exist multiple available (public) EEG datasets.
7
8
Here are 2 good list of public datasets:
9
1. [Open Datasets in Human Electrophysiology](https://github.com/voytekresearch/OpenData) (Tom Donoghue, VoytekLab)
10
2. [EEG / ERP data available for free public download](https://sccn.ucsd.edu/~arno/fam2data/publicly_available_EEG_data.html) (UCSD)
11
12
This series of workshops will focus on 5 categories: Sleep, Epilepsy, BCI, Emotions, Workload
13
14
## Sleep
15
* [Sleep Heart Health Study (SHHS)](https://sleepdata.org/datasets/shhs)  (access required - requested)
16
* [MASS Dataset](https://massdb.herokuapp.com/en/)  (access required)
17
* [Sleep EDF](https://www.physionet.org/physiobank/database/sleep-edf/)
18
* [Sleep EDFx](https://www.physionet.org/pn4/sleep-edfx/)
19
* [Sleep EDFxx](https://www.physionet.org/pn6/sleep-edfxx/)
20
* [MIT-BIH Polysomnographic](https://www.physionet.org/physiobank/database/slpdb/)
21
* [More Sleep Datasets here](https://sleepdata.org/datasets)
22
23
## Epilepsy
24
* [Bonn University Dataset](http://epileptologie-bonn.de/cms/front_content.php?idcat=193&lang=3&changelang=3)
25
* [CHB-MIT Dataset](https://physionet.org/pn6/chbmit/)
26
* [Boston Children's Hospital Epilepsy Dataset (PhysioNet)]()
27
* [Kaggle Competition on Seizure Detection](https://www.kaggle.com/c/seizure-prediction/data#_=_)
28
* [Temple University Hospital (TUH)](https://www.isip.piconepress.com/projects/tuh_eeg/index.shtml)
29
30
## BCI
31
* BCI Competitions
32
33
## Emotions
34
* [DEAP](http://www.eecs.qmul.ac.uk/mmv/datasets/deap/) (access required)
35
36
## ERPs
37
* [ERP - 4 Subjects, 10 Sessions (diff. days), ~11000 trials each](https://figshare.com/articles/A_dataset_for_the_test-retest_reliability_assessment_of_EEG_ERP_quantities/2068626)
38
39
# Visualize the Data
40
One quick way to look at an EDF file is via EDFBrowser. You won't be able to do any scripting, but just to look at the channels, the quality of the data, etc. It works well.
41
42
(_Insert Print Screen of EDFBrowser_)
43
44
You might encounter different file and data format (e.g. text file, csv file, edf file, etc.)
45
It could be a file with 1 column with values representing 1 sample every X (sampling rate) representing the amplitude(micro) volts.
46
47
# Step 3 - Preprocess the Data
48
49
50
51
# Tools
52
1. MNE Python
53
2. EEGLab
54
3. Brainstorm
55
4. EDFBrowser
56
57
58
# Other Datasets & Resources
59
http://epilepsy-database.eu/
60
https://physionet.org/lightwave/?db=slpdb&record=slp01a
61
62
63
# TODO
64
1. Add description of Datasets
65
2. Tools.