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b/analysis/args.py |
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#!/usr/bin/env python |
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from argparse import Namespace |
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from pathlib import Path |
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path = Path('../data') |
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args = Namespace( |
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workdir=path/'workdir', |
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figdir=path/'results/figures', |
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resultdir=path/'results', |
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dataset_csv=path/'proc_dataset.csv', |
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imminent_adm_cols=['hadm_id', 'processed_note', 'imminent_adm_label'], |
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prolonged_stay_cols=['hadm_id', 'processed_note', 'prolonged_stay_label'], |
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cols=['hadm_id', 'imminent_adm_label', 'prolonged_stay_label', 'processed_note', 'charttime', 'intime', 'chartinterval'], |
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dates=['charttime', 'intime'], |
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ia_thresh={ |
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'lr': 0.45, |
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'rf': 0.27, |
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'gbm': 0.435, |
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'mlp': 0.2, |
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}, |
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ps_thresh={ |
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'lr': 0.39, |
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'rf': 0.36, |
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'gbm': 0.324, |
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'mlp': 0.27, |
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}, |
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) |