#!/usr/bin/env python3
import setuptools
from pathlib import Path
here = Path(__file__).resolve().parent
python_version_requirement = ">=3.6, <3.8"
package_requirements = [
"importlib_resources >= 1.0",
"loompy >= 2.0",
"numpy >= 1.16",
"matplotlib >= 2.0",
"pandas >= 0.24",
"pillow >= 5.4",
"scikit-learn >= 0.20",
"scipy >= 1.2",
"seaborn >= 0.9",
"tables >= 3.5",
"tensorflow >= 1.15.2, < 2",
"tensorflow-probability == 0.7"
]
documentation_requirements = [
"pygments >= 2.4",
"sphinx >= 2.2"
]
extras_requirements = {
"docs": documentation_requirements
}
about = {}
with here.joinpath("scvae", "__init__.py").open(mode="r") as init_file:
exec(init_file.read(), about)
with here.joinpath("README.md").open(mode="r") as readme_file:
readme = readme_file.read()
with here.joinpath("CHANGELOG.md").open(mode="r") as changelog_file:
changelog = changelog_file.read()
setuptools.setup(
name=about["__name__"],
version=about["__version__"],
author=about["__author__"],
author_email=about["__email__"],
description=about["__description__"],
long_description="\n\n".join([readme, changelog]),
long_description_content_type="text/markdown",
url=about["__url__"],
packages=setuptools.find_packages(),
include_package_data=True,
entry_points={
"console_scripts": ["scvae=scvae.__main__:main"],
},
python_requires=python_version_requirement,
install_requires=package_requirements,
extras_require=extras_requirements,
license=about["__license__"],
classifiers=[
"Programming Language :: Python :: 3",
"License :: OSI Approved :: Apache Software License",
"Operating System :: OS Independent",
]
)