Commit [0a8e41] main

Initial commit

MarcoTheBlack MarcoTheBlack 2025-04-21

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added neusomatic/python/merge_tsvs.py
added neusomatic/python/network.py
added neusomatic/python/postprocess.py
added neusomatic/python/preprocess.py
added neusomatic/python/resolve_scores.py
added neusomatic/python/resolve_variants.py
added neusomatic/python/scan_alignments.py
added neusomatic/python/split_bed.py
added neusomatic/python/train.py
added neusomatic/python/utils.py
added resources/b37.bed
added resources/hg19.bed
added resources/hg38.bed
added resources/toy_example.png
added test/NeuSomatic_ensemble.vcf
added test/NeuSomatic_standalone.vcf
added test/docker_test.sh
added test/ensemble.tsv
added test/normal.bam
added test/normal.bam.bai
added test/region.bed
added test/run_test.sh
added test/tumor.bam
added test/tumor.bam.bai
added third_party/seqan.cmake
neusomatic/python/merge_tsvs.py Diff Switch to side-by-side view
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neusomatic/python/network.py Diff Switch to side-by-side view
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neusomatic/python/postprocess.py Diff Switch to side-by-side view
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neusomatic/python/preprocess.py Diff Switch to side-by-side view
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neusomatic/python/resolve_scores.py Diff Switch to side-by-side view
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neusomatic/python/resolve_variants.py Diff Switch to side-by-side view
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neusomatic/python/scan_alignments.py Diff Switch to side-by-side view
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neusomatic/python/split_bed.py Diff Switch to side-by-side view
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neusomatic/python/train.py Diff Switch to side-by-side view
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neusomatic/python/utils.py Diff Switch to side-by-side view
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resources/b37.bed Diff Switch to side-by-side view
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resources/hg19.bed Diff Switch to side-by-side view
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resources/hg38.bed Diff Switch to side-by-side view
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resources/toy_example.png
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test/NeuSomatic_ensemble.vcf Diff Switch to side-by-side view
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test/NeuSomatic_standalone.vcf Diff Switch to side-by-side view
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test/docker_test.sh Diff Switch to side-by-side view
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test/ensemble.tsv Diff Switch to side-by-side view
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test/normal.bam
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test/normal.bam.bai
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test/region.bed Diff Switch to side-by-side view
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test/run_test.sh Diff Switch to side-by-side view
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test/tumor.bam
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test/tumor.bam.bai
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third_party/seqan.cmake Diff Switch to side-by-side view
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