neusomatic / Git / Commit [0a8e41]

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Commit [0a8e41] main

Initial commit

Authored by: MarcoTheBlack 2025-04-21

Browse code at this revision

Parent: [9f309c]

1 2 3 4 > >> (Page 1 of 4)

added	.gitignore
added	LICENSE.md
added	README.md
added	build.sh
added	docker/Dockerfile
added	ensemble_docker_pipelines/README.md
added	ensemble_docker_pipelines/mutation_callers/submit_MuSE.sh
added	ensemble_docker_pipelines/mutation_callers/submit_MuTect2.sh
added	ensemble_docker_pipelines/mutation_callers/submit_SomaticSniper.sh
added	ensemble_docker_pipelines/mutation_callers/submit_Strelka.sh
added	ensemble_docker_pipelines/mutation_callers/submit_VarDictJava.sh
added	ensemble_docker_pipelines/mutation_callers/submit_VarScan2.sh
added	ensemble_docker_pipelines/mutation_callers/submit_Wrapper.sh
added	ensemble_docker_pipelines/prepare_callers_scripts.sh
added	neusomatic/CMakeLists.txt
added	neusomatic/cpp/CMakeLists.txt
added	neusomatic/cpp/msa.cpp
added	neusomatic/cpp/scan_alignments.cpp
added	neusomatic/include/Interval.hpp
added	neusomatic/include/Options.h
added	neusomatic/include/RefSeqs.h
added	neusomatic/include/SeqanUtils.h
added	neusomatic/include/bam_variant.hpp
added	neusomatic/include/bedio.hpp
added	neusomatic/include/change_coordinates.hpp

.gitignore Diff Switch to side-by-side view

LICENSE.md Diff Switch to side-by-side view

README.md Diff Switch to side-by-side view

build.sh Diff Switch to side-by-side view

docker/Dockerfile Diff Switch to side-by-side view

ensemble_docker_pipelines/README.md Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_MuSE.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_MuTect2.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_SomaticSniper.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_Strelka.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_VarDictJava.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_VarScan2.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/mutation_callers/submit_Wrapper.sh Diff Switch to side-by-side view

ensemble_docker_pipelines/prepare_callers_scripts.sh Diff Switch to side-by-side view

neusomatic/CMakeLists.txt Diff Switch to side-by-side view

neusomatic/cpp/CMakeLists.txt Diff Switch to side-by-side view

neusomatic/cpp/msa.cpp Diff Switch to side-by-side view

neusomatic/cpp/scan_alignments.cpp Diff Switch to side-by-side view

neusomatic/include/Interval.hpp Diff Switch to side-by-side view

neusomatic/include/Options.h Diff Switch to side-by-side view

neusomatic/include/RefSeqs.h Diff Switch to side-by-side view

neusomatic/include/SeqanUtils.h Diff Switch to side-by-side view

neusomatic/include/bam_variant.hpp Diff Switch to side-by-side view

neusomatic/include/bedio.hpp Diff Switch to side-by-side view

neusomatic/include/change_coordinates.hpp Diff Switch to side-by-side view

1 2 3 4 > >> (Page 1 of 4)