# This workflow will install Python dependencies, run tests and lint with a variety of Python versions

# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: Python package

on:

  push:

    branches: [ master ]

  pull_request:

    branches: [ master ]

jobs:

  build:

    runs-on: ubuntu-latest

    strategy:

      max-parallel: 4

      matrix:

        python-version: [3.6, 3.7, 3.8]

    steps:

    - uses: actions/checkout@v2

    - name: Set up Python ${{ matrix.python-version }}

      uses: actions/setup-python@v2

      with:

        python-version: ${{ matrix.python-version }}

    - name: Install dependencies

      run: |

        python -m pip install --upgrade pip

        python -m pip install flake8 pytest numpy

        sudo apt-get install bedtools

        if [ -f requirements.txt ]; then pip install -r requirements.txt; fi

        pip install .[tf2]

    - name: Test with pytest

      run: |

        pytest