janggu / Git / Diff of /README.md

Models:

MarcoTheBlack/

janggu

Downloads: 1

Diff of /README.md [2108ce] .. [0473b3]

Switch to unified view


=====================================
Janggu - Deep learning for Genomics
=====================================






































Janggu is a python package that facilitates deep learning in the context of
genomics. The package is freely available under a GPL-3.0 license.







In particular, the package allows for easy access to
typical **Genomics data formats**
and **out-of-the-box evaluation** (for keras models specifically) so that you can concentrate
on designing the neural network architecture for the purpose
...
| Kopp, W., Monti, R., Tamburrini, A., Ohler, U., Akalin, A. Deep learning for genomics using Janggu. Nat Commun 11, 3488 (2020). https://doi.org/10.1038/s41467-020-17155-y

	a/README.md		b/README.md
1	=====================================	1	=====================================
2	Janggu - Deep learning for Genomics	2	Janggu - Deep learning for Genomics
3	=====================================	3	=====================================
4		4
5	.. start-badges
6
7	.. image:: https://readthedocs.org/projects/janggu/badge/?style=flat
8	:target: https://janggu.readthedocs.io/en/latest
9	:alt: Documentation Status
10
11	.. image:: https://travis-ci.org/BIMSBbioinfo/janggu.svg?branch=master
12	:alt: Travis-CI Build Status
13	:target: https://travis-ci.org/BIMSBbioinfo/janggu
14
15	.. image:: https://codecov.io/github/BIMSBbioinfo/janggu/coverage.svg?branch=master
16	:alt: Coverage Status
17	:target: https://codecov.io/github/BIMSBbioinfo/janggu
18
19	.. image:: https://badge.fury.io/py/janggu.svg
20	:alt: PyPI Package latest release
21	:target: https://pypi.org/project/janggu
22
23	.. image:: https://img.shields.io/pypi/l/janggu.svg?color=green
24	:alt: License
25	:target: https://pypi.org/project/janggu
26
27	.. image:: https://img.shields.io/pypi/pyversions/janggu.svg
28	:alt: Supported Python Versions
29	:target: https://pypi.org/project/janggu/
30
31	.. image:: https://pepy.tech/badge/janggu
32	:alt: Downloads
33	:target: https://pepy.tech/project/janggu
34
35	.. end-badges
36
37	.. image:: jangguhex.png
38	:width: 40%
39	:alt: Janggu logo
40	:align: center
41
42	Janggu is a python package that facilitates deep learning in the context of	5	Janggu is a python package that facilitates deep learning in the context of
43	genomics. The package is freely available under a GPL-3.0 license.	6	genomics. The package is freely available under a GPL-3.0 license.
44		7
45	.. image:: Janggu-visAbstract.png
46	:width: 50%
47	:alt: Janggu visual abstract
48	:align: center
49
50		8
51	In particular, the package allows for easy access to	9	In particular, the package allows for easy access to
52	typical Genomics data formats	10	typical Genomics data formats
53	and out-of-the-box evaluation (for keras models specifically) so that you can concentrate	11	and out-of-the-box evaluation (for keras models specifically) so that you can concentrate
54	on designing the neural network architecture for the purpose	12	on designing the neural network architecture for the purpose
	...		...
162	\| Kopp, W., Monti, R., Tamburrini, A., Ohler, U., Akalin, A. Deep learning for genomics using Janggu. Nat Commun 11, 3488 (2020). https://doi.org/10.1038/s41467-020-17155-y	120	\| Kopp, W., Monti, R., Tamburrini, A., Ohler, U., Akalin, A. Deep learning for genomics using Janggu. Nat Commun 11, 3488 (2020). https://doi.org/10.1038/s41467-020-17155-y