import setuptools

from distutils.command.build import build

import subprocess

import os

ROOT = os.path.dirname(os.path.abspath(__file__))

with open("README.md", "r") as fh:

    long_description = fh.read()

class Build(build):

    """Customized setuptools build command"""

    def run(self):

        cmd = ["make"]

        subprocess.call(cmd, cwd=os.path.join(ROOT, "gsec", "utils"))

        # run original

        build.run(self)

setuptools.setup(

    name="gsec",

    version="0.0.1",

    # For calling the script

    entry_points={

        "console_scripts": [

            'gsec = gsec.gsec:main',

            'gsec_train = gsec.gsec_train:main',

        ]

    },

    author="Isaac Gelman, Nicolas Perez, Natalie Abreu, Shannon Brownlee, \

    Tomas Angelini, Laura Cao, Shreya Havaldar",

    description="Automated, generalizable model building tool \

    for the Sequence Read Archive",

    long_description=long_description,

    url="https://github.com/gelman-usc/gsec",

    packages=setuptools.find_packages(),

    classifiers=[

        "Programming Language :: Python :: 3"

    ],

    python_requires=">=3.6",

    install_requires=[

        "pandas",

        "sklearn",

        "numpy",

    ],

    cmdclass= {

        'build': Build,

    },

)