fastai-genomic / Git / Commit [98867e]

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Commit [98867e] main

Initial commit

Authored by: MarcoTheBlack 2025-04-21

Browse code at this revision

Parent: [f1748c]

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added	ipynb/notebook2script.py
added	ipynb/phylogenetic tree and distributed genome represenation.ipynb
added	ipynb/run_notebook.py
added	ipynb/sentence embedding latent representation all bacteria from dna2vec training set .ipynb
added	ipynb/sequences to dataframe.ipynb
added	ipynb/split into folders.ipynb
added	ipynb/tree and tsne of first 9 cells from mitolin data .ipynb
added	ipynb/vectorise.ipynb
added	requriements.txt
added	results/inventory.csv
added	results/inventory_by_file.csv
added	tests/test_sequence.py
added	util/__init__.py
added	util/inventory.py
added	util/preprocess_fasta_for_dna2vec.py
added	util/split_into_folders.py

ipynb/notebook2script.py Diff Switch to side-by-side view

ipynb/phylogenetic tree and distributed genome represenation.ipynb Diff Switch to side-by-side view

ipynb/run_notebook.py Diff Switch to side-by-side view

ipynb/sentence embedding latent representation all bacteria from dna2vec training set .ipynb Diff Switch to side-by-side view

ipynb/sequences to dataframe.ipynb Diff Switch to side-by-side view

ipynb/split into folders.ipynb Diff Switch to side-by-side view

ipynb/tree and tsne of first 9 cells from mitolin data .ipynb Diff Switch to side-by-side view

ipynb/vectorise.ipynb Diff Switch to side-by-side view

requriements.txt Diff Switch to side-by-side view

results/inventory.csv Diff Switch to side-by-side view

results/inventory_by_file.csv Diff Switch to side-by-side view

tests/test_sequence.py Diff Switch to side-by-side view

util/init.py Diff Switch to side-by-side view

util/inventory.py Diff Switch to side-by-side view

util/preprocess_fasta_for_dna2vec.py Diff Switch to side-by-side view

util/split_into_folders.py Diff Switch to side-by-side view

<< < 1 2 (Page 2 of 2)