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| a | b/assets/schema_preprocessing.json | ||
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| 1 | { |
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| 2 | "$schema": "https://json-schema.org/draft/2020-12/schema", |
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| 3 | "$id": "https://example.com/schemas/schema_preprocessing.json", |
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| 4 | "title": "nf-core/differentialabundance pipeline - params.data_preprocessing schema", |
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| 5 | "description": "Schema for the file provided with params.data_preprocessing", |
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| 6 | "type": "array", |
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| 7 | "items": { |
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| 8 | "type": "object", |
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| 9 | "properties": { |
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| 10 | "id": { |
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| 11 | "type": "string", |
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| 12 | "meta": ["id"] |
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| 13 | }, |
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| 14 | "protocol": { |
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| 15 | "type": "string", |
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| 16 | "enum": ["ibis"], |
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| 17 | "meta": ["protocol"] |
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| 18 | }, |
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| 19 | "background_type": { |
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| 20 | "type": "string", |
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| 21 | "enum": ["aliens", "shade", "shuffle"], |
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| 22 | "meta": ["background_type"] |
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| 23 | }, |
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| 24 | "variable": { |
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| 25 | "type": "string", |
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| 26 | "meta": ["variable"] |
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| 27 | }, |
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| 28 | "target": { |
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| 29 | "type": "string", |
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| 30 | "meta": ["target"] |
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| 31 | }, |
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| 32 | "background": { |
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| 33 | "type": "string", |
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| 34 | "meta": ["background"], |
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| 35 | "default": "" |
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| 36 | }, |
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| 37 | "shade_args": { |
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| 38 | "type": "string", |
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| 39 | "meta": ["shade_args"], |
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| 40 | "default": "" |
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| 41 | } |
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| 42 | }, |
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| 43 | "required": ["id", "protocol"], |
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| 44 | "allOf": [ |
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| 45 | { |
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| 46 | "if": { |
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| 47 | "properties": { "protocol": { "const": "ibis" } } |
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| 48 | }, |
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| 49 | "then": { |
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| 50 | "required": ["background_type", "variable", "target"] |
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| 51 | } |
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| 52 | }, |
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| 53 | { |
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| 54 | "if": { |
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| 55 | "properties": { "background_type": { "const": "aliens" } } |
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| 56 | }, |
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| 57 | "then": { |
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| 58 | "required": ["background"] |
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| 59 | } |
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| 60 | }, |
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| 61 | { |
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| 62 | "if": { |
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| 63 | "properties": { "background_type": { "const": "shade" } } |
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| 64 | }, |
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| 65 | "then": { |
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| 66 | "required": ["shade_args"] |
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| 67 | } |
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| 68 | } |
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| 69 | ], |
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| 70 | "additionalProperties": false |
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| 71 | } |
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| 72 | } |