--- a +++ b/tests/data/config.gin @@ -0,0 +1,14 @@ +# exclude a large portion of the training set +exclude_chr=[] +valid_chr = ['chr2'] +test_chr = [] +seq_width = 200 +n_dil_layers = 1 +train.epochs = 1 +train.batch_size = 4 + +PeakPredictionProfileMetric.pos_min_threshold = 0.015 +PeakPredictionProfileMetric.neg_max_threshold = 0.015 +PeakPredictionProfileMetric.required_min_pos_counts = 0 + +bpnet_data.interval_augmentation_shift = 100 \ No newline at end of file