--- a +++ b/examples/chip-nexus/config.gin @@ -0,0 +1,9 @@ +# exclude a large portion of the training set +exclude_chr=["chrX","chrY","chr5","chr6","chr7","chr10","chr14","chr11","chr13","chr12","chr15"] +valid_chr = ['chr2'] +test_chr = ['chr1', 'chr8', 'chr9', + 'chr3', 'chr4'] +seq_width = 200 +n_dil_layers = 3 +bpnet_data.interval_augmentation_shift = 100 +train.seed = 1 \ No newline at end of file