ai_genomics

Setup

• Meet the data science cookiecutter requirements, in brief:
• Install: git-crypt, direnv, and conda
• Have a Nesta AWS account configured with awscli
• Run make install to configure the development environment:
• Setup the conda environment
• Configure pre-commit
• Configure metaflow to use AWS

Dependencies

Download spaCy's en_core_web_sm 3.1.0 pipeline:

pip install https://github.com/explosion/spacy-models/releases/download/en_core_web_sm-3.1.0/en_core_web_sm-3.1.0.tar.gz

Contributor guidelines

Technical and working style guidelines

Project based on Nesta's data science project template
(Read the docs here).