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Models:
Marco Lenoir
MarcoTheBlack/
VITAE
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[2c6b19]: / paper / Benchmarking with real and synthetic datasets / ti_methods / ti_paga / Dockerfile

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FROM dynverse/dynwrap_latest:v0.1.0



ARG GITHUB_PAT



# igraph and louvain do not get installed by scanpy

RUN pip install python-igraph louvain



RUN pip install scanpy



# for theislab/anndata#159

RUN pip install scipy==v1.2.1



RUN pip install fa2



COPY definition.yml run.py example.sh /code/



ENTRYPOINT ["/code/run.py"]